EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000021117 (Gene tree)
Gene ID: 108279074
Gene Symbol: sart1
Alias: Ara1|HAF|SNRNP110|Snu66
Full Name: spliceosome associated factor 1%2C recruiter of U4/U6.U5 tri-snRNP
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 13327 bases
Position: chr18:12749736-12763062
Accession: 108279074
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000031380	SART-1	PF03343.13	1.8e-149	1	1
ENSIPUP00000031403	SART-1	PF03343.13	5.7e-143	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000032659	-	2370	-	ENSIPUP00000031403	789 (aa)	-	-
ENSIPUT00000032635	-	2625	XM_017493028	ENSIPUP00000031380	778 (aa)	XP_017348517	A0A2D0T0R9

Gene Model

Click here to download ENSIPUG00000021117's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000021117's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000021117	sart1	100	65.926	ENSG00000175467	SART1	100	64.982	Homo_sapiens
ENSIPUG00000021117	sart1	89	68.867	ENSAMEG00000017260	SART1	99	70.000	Ailuropoda_melanoleuca
ENSIPUG00000021117	sart1	100	66.337	ENSANAG00000037219	SART1	95	97.826	Aotus_nancymaae
ENSIPUG00000021117	sart1	100	66.089	ENSBTAG00000003094	SART1	100	65.640	Bos_taurus
ENSIPUG00000021117	sart1	71	49.000	WBGene00017605	F19F10.9	96	32.716	Caenorhabditis_elegans
ENSIPUG00000021117	sart1	100	66.460	ENSCJAG00000001741	SART1	100	65.142	Callithrix_jacchus
ENSIPUG00000021117	sart1	98	65.982	ENSCAFG00000013103	SART1	96	66.667	Canis_familiaris
ENSIPUG00000021117	sart1	100	66.007	ENSCAFG00020015337	SART1	100	65.394	Canis_lupus_dingo
ENSIPUG00000021117	sart1	100	65.718	ENSCHIG00000016364	SART1	100	65.266	Capra_hircus
ENSIPUG00000021117	sart1	89	63.623	ENSTSYG00000029994	SART1	93	63.470	Carlito_syrichta
ENSIPUG00000021117	sart1	87	71.387	ENSCAPG00000016369	SART1	96	70.888	Cavia_aperea
ENSIPUG00000021117	sart1	88	68.227	ENSCPOG00000020882	SART1	100	69.220	Cavia_porcellus
ENSIPUG00000021117	sart1	100	66.460	ENSCCAG00000037852	SART1	92	97.826	Cebus_capucinus
ENSIPUG00000021117	sart1	100	65.432	ENSCATG00000032953	SART1	92	97.826	Cercocebus_atys
ENSIPUG00000021117	sart1	100	66.584	ENSCLAG00000016593	SART1	100	65.556	Chinchilla_lanigera
ENSIPUG00000021117	sart1	100	66.049	ENSCSAG00000008081	SART1	100	64.895	Chlorocebus_sabaeus
ENSIPUG00000021117	sart1	100	65.895	ENSCPBG00000023434	SART1	100	66.504	Chrysemys_picta_bellii
ENSIPUG00000021117	sart1	99	36.493	ENSCING00000009048	-	82	39.143	Ciona_intestinalis
ENSIPUG00000021117	sart1	98	37.161	ENSCSAVG00000009337	-	99	37.759	Ciona_savignyi
ENSIPUG00000021117	sart1	94	59.764	ENSCANG00000043164	SART1	97	59.817	Colobus_angolensis_palliatus
ENSIPUG00000021117	sart1	100	65.725	ENSCGRG00001021367	Sart1	100	65.031	Cricetulus_griseus_chok1gshd
ENSIPUG00000021117	sart1	88	70.413	ENSCGRG00000015292	Sart1	98	69.915	Cricetulus_griseus_crigri
ENSIPUG00000021117	sart1	100	78.900	ENSCVAG00000009800	SART1	100	78.645	Cyprinodon_variegatus
ENSIPUG00000021117	sart1	51	61.671	ENSDNOG00000038920	-	89	58.596	Dasypus_novemcinctus
ENSIPUG00000021117	sart1	85	56.909	ENSDNOG00000041860	-	94	58.479	Dasypus_novemcinctus
ENSIPUG00000021117	sart1	100	62.640	ENSDORG00000011887	Sart1	100	62.112	Dipodomys_ordii
ENSIPUG00000021117	sart1	88	40.984	FBgn0032388	CG6686	71	40.897	Drosophila_melanogaster
ENSIPUG00000021117	sart1	67	54.610	ENSEBUG00000006203	SART1	52	63.072	Eptatretus_burgeri
ENSIPUG00000021117	sart1	100	65.806	ENSEASG00005004465	SART1	100	65.644	Equus_asinus_asinus
ENSIPUG00000021117	sart1	100	65.683	ENSECAG00000023491	TSGA10IP	93	65.479	Equus_caballus
ENSIPUG00000021117	sart1	100	66.543	ENSFCAG00000013278	SART1	100	65.760	Felis_catus
ENSIPUG00000021117	sart1	100	66.002	ENSFDAG00000008891	SART1	100	64.888	Fukomys_damarensis
ENSIPUG00000021117	sart1	100	77.721	ENSFHEG00000010334	SART1	100	77.721	Fundulus_heteroclitus
ENSIPUG00000021117	sart1	100	77.821	ENSGAFG00000013919	SART1	100	77.564	Gambusia_affinis
ENSIPUG00000021117	sart1	99	75.738	ENSGACG00000016951	SART1	100	75.064	Gasterosteus_aculeatus
ENSIPUG00000021117	sart1	100	66.218	ENSGAGG00000022783	SART1	100	65.233	Gopherus_agassizii
ENSIPUG00000021117	sart1	100	65.802	ENSGGOG00000009457	SART1	95	97.826	Gorilla_gorilla
ENSIPUG00000021117	sart1	65	54.183	ENSHBUG00000020412	-	70	61.321	Haplochromis_burtoni
ENSIPUG00000021117	sart1	100	66.298	ENSHGLG00000015022	SART1	100	65.517	Heterocephalus_glaber_female
ENSIPUG00000021117	sart1	100	66.337	ENSHGLG00100018346	SART1	100	65.174	Heterocephalus_glaber_male
ENSIPUG00000021117	sart1	100	76.641	ENSHCOG00000007259	SART1	100	75.539	Hippocampus_comes
ENSIPUG00000021117	sart1	100	67.038	ENSSTOG00000023375	SART1	100	65.760	Ictidomys_tridecemlineatus
ENSIPUG00000021117	sart1	100	65.637	ENSJJAG00000019103	Sart1	100	64.982	Jaculus_jaculus
ENSIPUG00000021117	sart1	84	64.985	ENSLACG00000011165	SART1	99	66.260	Latimeria_chalumnae
ENSIPUG00000021117	sart1	60	76.533	ENSLOCG00000001871	SART1	94	75.687	Lepisosteus_oculatus
ENSIPUG00000021117	sart1	100	65.875	ENSLAFG00000001768	SART1	100	65.750	Loxodonta_africana
ENSIPUG00000021117	sart1	100	65.432	ENSMFAG00000002484	SART1	92	97.826	Macaca_fascicularis
ENSIPUG00000021117	sart1	65	97.826	ENSMMUG00000008065	SART1	95	97.826	Macaca_mulatta
ENSIPUG00000021117	sart1	100	65.432	ENSMNEG00000035507	SART1	92	97.826	Macaca_nemestrina
ENSIPUG00000021117	sart1	93	68.471	ENSMLEG00000036259	SART1	100	68.071	Mandrillus_leucophaeus
ENSIPUG00000021117	sart1	100	65.679	ENSMAUG00000016274	Sart1	100	64.865	Mesocricetus_auratus
ENSIPUG00000021117	sart1	100	65.725	ENSMICG00000030096	SART1	100	65.890	Microcebus_murinus
ENSIPUG00000021117	sart1	100	65.926	ENSMOCG00000019815	Sart1	100	64.908	Microtus_ochrogaster
ENSIPUG00000021117	sart1	92	80.028	ENSMMOG00000004019	SART1	96	80.028	Mola_mola
ENSIPUG00000021117	sart1	100	58.507	ENSMODG00000009047	SART1	100	57.664	Monodelphis_domestica
ENSIPUG00000021117	sart1	100	65.314	MGP_CAROLIEiJ_G0022545	Sart1	100	65.725	Mus_caroli
ENSIPUG00000021117	sart1	100	65.560	ENSMUSG00000039148	Sart1	100	65.725	Mus_musculus
ENSIPUG00000021117	sart1	100	65.971	MGP_PahariEiJ_G0014042	Sart1	100	65.725	Mus_pahari
ENSIPUG00000021117	sart1	100	65.560	MGP_SPRETEiJ_G0023459	Sart1	100	65.725	Mus_spretus
ENSIPUG00000021117	sart1	100	65.428	ENSMPUG00000011394	SART1	100	66.171	Mustela_putorius_furo
ENSIPUG00000021117	sart1	100	64.742	ENSMLUG00000011078	SART1	100	64.084	Myotis_lucifugus
ENSIPUG00000021117	sart1	100	65.261	ENSNGAG00000004727	Sart1	100	64.612	Nannospalax_galili
ENSIPUG00000021117	sart1	100	63.288	ENSNLEG00000005961	SART1	94	97.674	Nomascus_leucogenys
ENSIPUG00000021117	sart1	100	61.152	ENSMEUG00000004918	SART1	100	60.658	Notamacropus_eugenii
ENSIPUG00000021117	sart1	100	66.708	ENSODEG00000017777	SART1	100	65.679	Octodon_degus
ENSIPUG00000021117	sart1	100	80.488	ENSONIG00000021283	SART1	100	79.846	Oreochromis_niloticus
ENSIPUG00000021117	sart1	100	76.123	ENSORLG00000028400	SART1	100	75.481	Oryzias_latipes
ENSIPUG00000021117	sart1	100	75.995	ENSORLG00020014721	SART1	100	75.353	Oryzias_latipes_hni
ENSIPUG00000021117	sart1	100	76.123	ENSORLG00015014467	SART1	100	75.481	Oryzias_latipes_hsok
ENSIPUG00000021117	sart1	100	77.436	ENSOMEG00000002508	SART1	100	76.508	Oryzias_melastigma
ENSIPUG00000021117	sart1	100	66.133	ENSOGAG00000016523	SART1	100	65.351	Otolemur_garnettii
ENSIPUG00000021117	sart1	89	68.608	ENSOARG00000000694	SART1	99	68.750	Ovis_aries
ENSIPUG00000021117	sart1	100	66.049	ENSPPAG00000030167	SART1	91	97.674	Pan_paniscus
ENSIPUG00000021117	sart1	100	65.304	ENSPPRG00000015794	SART1	100	64.895	Panthera_pardus
ENSIPUG00000021117	sart1	80	55.521	ENSPTIG00000017833	SART1	98	55.363	Panthera_tigris_altaica
ENSIPUG00000021117	sart1	100	66.049	ENSPTRG00000003905	SART1	91	97.674	Pan_troglodytes
ENSIPUG00000021117	sart1	100	65.432	ENSPANG00000023502	SART1	95	97.826	Papio_anubis
ENSIPUG00000021117	sart1	94	68.477	ENSPSIG00000002712	SART1	91	70.845	Pelodiscus_sinensis
ENSIPUG00000021117	sart1	100	64.268	ENSPEMG00000012166	Sart1	100	64.064	Peromyscus_maniculatus_bairdii
ENSIPUG00000021117	sart1	50	50.794	ENSPMAG00000005488	SART1	95	53.269	Petromyzon_marinus
ENSIPUG00000021117	sart1	100	65.973	ENSPCIG00000008311	SART1	100	65.207	Phascolarctos_cinereus
ENSIPUG00000021117	sart1	100	77.977	ENSPFOG00000019883	SART1	100	77.977	Poecilia_formosa
ENSIPUG00000021117	sart1	100	77.081	ENSPLAG00000019633	SART1	100	77.081	Poecilia_latipinna
ENSIPUG00000021117	sart1	100	77.849	ENSPMEG00000013621	SART1	100	77.849	Poecilia_mexicana
ENSIPUG00000021117	sart1	100	75.769	ENSPREG00000000100	SART1	100	75.385	Poecilia_reticulata
ENSIPUG00000021117	sart1	100	63.827	ENSPPYG00000003039	SART1	100	62.885	Pongo_abelii
ENSIPUG00000021117	sart1	72	94.737	ENSPCAG00000011262	SART1	64	94.737	Procavia_capensis
ENSIPUG00000021117	sart1	100	64.975	ENSPCOG00000008448	SART1	100	65.136	Propithecus_coquereli
ENSIPUG00000021117	sart1	100	60.345	ENSPVAG00000016969	SART1	100	59.951	Pteropus_vampyrus
ENSIPUG00000021117	sart1	100	80.616	ENSPNYG00000014765	SART1	100	79.974	Pundamilia_nyererei
ENSIPUG00000021117	sart1	100	65.560	ENSRNOG00000020475	Sart1	100	65.233	Rattus_norvegicus
ENSIPUG00000021117	sart1	100	64.321	ENSRBIG00000044079	SART1	90	97.826	Rhinopithecus_bieti
ENSIPUG00000021117	sart1	100	64.321	ENSRROG00000045251	SART1	90	97.826	Rhinopithecus_roxellana
ENSIPUG00000021117	sart1	100	66.667	ENSSBOG00000023102	SART1	94	97.674	Saimiri_boliviensis_boliviensis
ENSIPUG00000021117	sart1	100	65.711	ENSSHAG00000011437	SART1	100	64.895	Sarcophilus_harrisii
ENSIPUG00000021117	sart1	100	70.775	ENSSFOG00015018792	SART1	100	73.062	Scleropages_formosus
ENSIPUG00000021117	sart1	100	77.411	ENSSMAG00000001043	SART1	100	76.972	Scophthalmus_maximus
ENSIPUG00000021117	sart1	97	79.708	ENSSDUG00000019131	SART1	100	78.691	Seriola_dumerili
ENSIPUG00000021117	sart1	100	80.179	ENSSLDG00000024307	SART1	100	79.076	Seriola_lalandi_dorsalis
ENSIPUG00000021117	sart1	100	66.667	ENSSPUG00000009399	SART1	100	67.162	Sphenodon_punctatus
ENSIPUG00000021117	sart1	100	79.795	ENSSPAG00000013156	SART1	100	79.076	Stegastes_partitus
ENSIPUG00000021117	sart1	100	66.420	ENSSSCG00000012963	SART1	100	65.513	Sus_scrofa
ENSIPUG00000021117	sart1	100	77.792	ENSTRUG00000025047	SART1	100	77.407	Takifugu_rubripes
ENSIPUG00000021117	sart1	65	88.679	ENSTBEG00000010864	-	68	88.679	Tupaia_belangeri
ENSIPUG00000021117	sart1	84	58.270	ENSTBEG00000002397	-	86	57.466	Tupaia_belangeri
ENSIPUG00000021117	sart1	72	51.675	ENSTBEG00000010370	-	100	50.524	Tupaia_belangeri
ENSIPUG00000021117	sart1	100	63.243	ENSTTRG00000008751	SART1	100	62.716	Tursiops_truncatus
ENSIPUG00000021117	sart1	100	63.354	ENSUAMG00000020770	SART1	100	62.005	Ursus_americanus
ENSIPUG00000021117	sart1	61	84.109	ENSUMAG00000010903	SART1	88	80.292	Ursus_maritimus
ENSIPUG00000021117	sart1	100	66.131	ENSVVUG00000027041	SART1	100	65.517	Vulpes_vulpes
ENSIPUG00000021117	sart1	91	71.569	ENSXETG00000011429	sart1	100	68.900	Xenopus_tropicalis
ENSIPUG00000021117	sart1	100	77.179	ENSXCOG00000005296	SART1	100	77.308	Xiphophorus_couchianus