EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000021150 (Gene tree)
Gene ID: 108260134
Gene Symbol: srrt
Alias: CHUNP6881|ars2|zgc:92060
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 7200 bases
Position: chr28:17991181-17998380
Accession: 108260134
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000031479	ARS2	PF04959.13	5.8e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000032736	-	2658	XM_017460168	ENSIPUP00000031479	885 (aa)	XP_017315657	-

Gene Model

Click here to download ENSIPUG00000021150's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000021150's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000021150	srrt	51	77.174	ENSG00000087087	SRRT	98	82.609	Homo_sapiens
ENSIPUG00000021150	srrt	95	71.529	ENSAPOG00000002304	srrt	93	74.760	Acanthochromis_polyacanthus
ENSIPUG00000021150	srrt	96	66.974	ENSAMEG00000014506	SRRT	51	77.899	Ailuropoda_melanoleuca
ENSIPUG00000021150	srrt	82	82.456	ENSACIG00000015795	srrt	87	82.135	Amphilophus_citrinellus
ENSIPUG00000021150	srrt	83	82.571	ENSAOCG00000009693	srrt	86	82.571	Amphiprion_ocellaris
ENSIPUG00000021150	srrt	53	65.489	ENSAOCG00000009189	-	52	67.462	Amphiprion_ocellaris
ENSIPUG00000021150	srrt	95	74.383	ENSAPEG00000003646	srrt	88	81.917	Amphiprion_percula
ENSIPUG00000021150	srrt	53	65.489	ENSAPEG00000020016	-	52	67.462	Amphiprion_percula
ENSIPUG00000021150	srrt	95	73.796	ENSATEG00000014425	srrt	85	82.533	Anabas_testudineus
ENSIPUG00000021150	srrt	55	63.618	ENSATEG00000003652	-	86	65.885	Anabas_testudineus
ENSIPUG00000021150	srrt	51	77.293	ENSACAG00000001014	SRRT	53	77.996	Anolis_carolinensis
ENSIPUG00000021150	srrt	51	76.017	ENSANAG00000031718	SRRT	53	75.161	Aotus_nancymaae
ENSIPUG00000021150	srrt	53	65.895	ENSACLG00000009423	-	52	65.659	Astatotilapia_calliptera
ENSIPUG00000021150	srrt	95	73.882	ENSACLG00000013156	srrt	89	74.548	Astatotilapia_calliptera
ENSIPUG00000021150	srrt	95	82.464	ENSAMXG00000016671	srrt	89	83.231	Astyanax_mexicanus
ENSIPUG00000021150	srrt	51	76.231	ENSBTAG00000001134	SRRT	53	75.375	Bos_taurus
ENSIPUG00000021150	srrt	68	41.907	WBGene00017085	E01A2.2	81	46.875	Caenorhabditis_elegans
ENSIPUG00000021150	srrt	96	65.247	ENSCAFG00000023538	SRRT	53	74.946	Canis_familiaris
ENSIPUG00000021150	srrt	96	65.473	ENSCAFG00020013358	SRRT	52	78.667	Canis_lupus_dingo
ENSIPUG00000021150	srrt	86	76.724	ENSCHIG00000010495	SRRT	89	76.724	Capra_hircus
ENSIPUG00000021150	srrt	51	76.724	ENSTSYG00000036426	SRRT	56	76.724	Carlito_syrichta
ENSIPUG00000021150	srrt	51	77.243	ENSCAPG00000013586	SRRT	89	70.378	Cavia_aperea
ENSIPUG00000021150	srrt	51	75.855	ENSCPOG00000001739	SRRT	53	75.214	Cavia_porcellus
ENSIPUG00000021150	srrt	51	76.017	ENSCCAG00000015877	SRRT	53	75.161	Cebus_capucinus
ENSIPUG00000021150	srrt	80	75.693	ENSCLAG00000007568	SRRT	54	75.427	Chinchilla_lanigera
ENSIPUG00000021150	srrt	50	77.778	ENSCHOG00000007815	SRRT	67	70.740	Choloepus_hoffmanni
ENSIPUG00000021150	srrt	72	69.057	ENSCPBG00000011553	SRRT	81	67.063	Chrysemys_picta_bellii
ENSIPUG00000021150	srrt	100	41.009	ENSCSAVG00000008394	-	81	57.184	Ciona_savignyi
ENSIPUG00000021150	srrt	96	66.400	ENSCGRG00001001594	Srrt	53	75.480	Cricetulus_griseus_chok1gshd
ENSIPUG00000021150	srrt	90	78.431	ENSCGRG00000007292	Srrt	75	78.523	Cricetulus_griseus_crigri
ENSIPUG00000021150	srrt	98	68.295	ENSCSEG00000017878	srrt	93	66.986	Cynoglossus_semilaevis
ENSIPUG00000021150	srrt	95	70.318	ENSCVAG00000019848	srrt	93	74.970	Cyprinodon_variegatus
ENSIPUG00000021150	srrt	90	53.695	ENSCVAG00000017344	-	52	64.760	Cyprinodon_variegatus
ENSIPUG00000021150	srrt	96	82.807	ENSDARG00000017762	srrt	92	83.836	Danio_rerio
ENSIPUG00000021150	srrt	51	76.017	ENSDNOG00000003851	SRRT	53	75.161	Dasypus_novemcinctus
ENSIPUG00000021150	srrt	51	73.060	ENSDORG00000005584	Srrt	89	73.060	Dipodomys_ordii
ENSIPUG00000021150	srrt	99	44.698	FBgn0033062	Ars2	68	51.797	Drosophila_melanogaster
ENSIPUG00000021150	srrt	66	60.079	ENSEBUG00000008517	-	80	61.042	Eptatretus_burgeri
ENSIPUG00000021150	srrt	51	76.017	ENSEASG00005016956	SRRT	53	75.161	Equus_asinus_asinus
ENSIPUG00000021150	srrt	51	76.017	ENSECAG00000012292	SRRT	53	75.161	Equus_caballus
ENSIPUG00000021150	srrt	81	78.125	ENSEEUG00000009117	SRRT	57	87.838	Erinaceus_europaeus
ENSIPUG00000021150	srrt	96	74.771	ENSELUG00000006651	srrt	92	75.972	Esox_lucius
ENSIPUG00000021150	srrt	52	67.850	ENSELUG00000021216	-	53	68.565	Esox_lucius
ENSIPUG00000021150	srrt	51	76.017	ENSFCAG00000006855	SRRT	53	75.161	Felis_catus
ENSIPUG00000021150	srrt	51	73.068	ENSFDAG00000021347	SRRT	98	63.027	Fukomys_damarensis
ENSIPUG00000021150	srrt	75	80.145	ENSFHEG00000002756	srrt	87	80.387	Fundulus_heteroclitus
ENSIPUG00000021150	srrt	53	58.058	ENSFHEG00000004105	-	94	58.140	Fundulus_heteroclitus
ENSIPUG00000021150	srrt	65	66.440	ENSGMOG00000018694	-	78	66.741	Gadus_morhua
ENSIPUG00000021150	srrt	96	69.800	ENSGMOG00000018619	srrt	92	69.333	Gadus_morhua
ENSIPUG00000021150	srrt	51	63.341	ENSGAFG00000020383	-	55	62.796	Gambusia_affinis
ENSIPUG00000021150	srrt	95	73.498	ENSGAFG00000005423	srrt	93	73.729	Gambusia_affinis
ENSIPUG00000021150	srrt	93	54.112	ENSGACG00000001100	-	52	63.283	Gasterosteus_aculeatus
ENSIPUG00000021150	srrt	96	73.923	ENSGACG00000020387	srrt	92	73.141	Gasterosteus_aculeatus
ENSIPUG00000021150	srrt	96	66.552	ENSHGLG00000008344	Srrt	89	71.795	Heterocephalus_glaber_female
ENSIPUG00000021150	srrt	96	66.705	ENSHGLG00100018857	Srrt	89	73.060	Heterocephalus_glaber_male
ENSIPUG00000021150	srrt	93	53.034	ENSHCOG00000008904	-	88	63.216	Hippocampus_comes
ENSIPUG00000021150	srrt	98	71.200	ENSHCOG00000005403	srrt	93	71.065	Hippocampus_comes
ENSIPUG00000021150	srrt	51	76.509	ENSSTOG00000013776	SRRT	53	76.509	Ictidomys_tridecemlineatus
ENSIPUG00000021150	srrt	96	65.212	ENSJJAG00000010446	Srrt	89	72.845	Jaculus_jaculus
ENSIPUG00000021150	srrt	53	63.599	ENSKMAG00000008468	-	54	63.941	Kryptolebias_marmoratus
ENSIPUG00000021150	srrt	95	73.380	ENSKMAG00000013599	srrt	93	73.277	Kryptolebias_marmoratus
ENSIPUG00000021150	srrt	98	70.790	ENSLBEG00000016308	srrt	55	80.380	Labrus_bergylta
ENSIPUG00000021150	srrt	95	55.543	ENSLACG00000001089	SRRT	53	59.827	Latimeria_chalumnae
ENSIPUG00000021150	srrt	91	66.868	ENSLOCG00000013658	srrt	89	73.741	Lepisosteus_oculatus
ENSIPUG00000021150	srrt	51	75.105	ENSMMUG00000021255	SRRT	53	75.641	Macaca_mulatta
ENSIPUG00000021150	srrt	53	67.722	ENSMAMG00000010681	-	93	57.160	Mastacembelus_armatus
ENSIPUG00000021150	srrt	53	66.105	ENSMZEG00005028002	-	52	65.875	Maylandia_zebra
ENSIPUG00000021150	srrt	60	64.954	ENSMAUG00000011386	Srrt	98	67.636	Mesocricetus_auratus
ENSIPUG00000021150	srrt	51	76.017	ENSMICG00000009471	SRRT	55	74.262	Microcebus_murinus
ENSIPUG00000021150	srrt	51	76.017	ENSMOCG00000001971	Srrt	89	71.734	Microtus_ochrogaster
ENSIPUG00000021150	srrt	51	68.615	ENSMMOG00000011137	-	55	67.679	Mola_mola
ENSIPUG00000021150	srrt	95	69.941	ENSMMOG00000016399	srrt	84	80.440	Mola_mola
ENSIPUG00000021150	srrt	51	73.932	ENSMODG00000004862	SRRT	89	73.504	Monodelphis_domestica
ENSIPUG00000021150	srrt	88	68.926	ENSMALG00000018604	srrt	97	68.370	Monopterus_albus
ENSIPUG00000021150	srrt	56	49.798	ENSMALG00000005567	-	84	52.916	Monopterus_albus
ENSIPUG00000021150	srrt	51	71.949	MGP_CAROLIEiJ_G0027870	Srrt	99	74.074	Mus_caroli
ENSIPUG00000021150	srrt	51	72.805	ENSMUSG00000037364	Srrt	99	74.074	Mus_musculus
ENSIPUG00000021150	srrt	51	78.118	MGP_PahariEiJ_G0024456	Srrt	99	74.074	Mus_pahari
ENSIPUG00000021150	srrt	51	72.805	MGP_SPRETEiJ_G0028875	Srrt	99	74.074	Mus_spretus
ENSIPUG00000021150	srrt	96	65.362	ENSMPUG00000015839	SRRT	53	75.161	Mustela_putorius_furo
ENSIPUG00000021150	srrt	51	75.803	ENSMLUG00000009975	SRRT	53	74.946	Myotis_lucifugus
ENSIPUG00000021150	srrt	51	76.017	ENSNGAG00000023715	Srrt	64	75.161	Nannospalax_galili
ENSIPUG00000021150	srrt	51	81.938	ENSNBRG00000019100	srrt	92	74.002	Neolamprologus_brichardi
ENSIPUG00000021150	srrt	80	66.740	ENSNLEG00000011987	SRRT	54	66.013	Nomascus_leucogenys
ENSIPUG00000021150	srrt	96	54.931	ENSMEUG00000011941	SRRT	52	62.208	Notamacropus_eugenii
ENSIPUG00000021150	srrt	60	73.485	ENSOPRG00000002502	-	67	77.099	Ochotona_princeps
ENSIPUG00000021150	srrt	51	77.462	ENSODEG00000016856	SRRT	52	77.462	Octodon_degus
ENSIPUG00000021150	srrt	53	66.597	ENSONIG00000016080	-	93	56.280	Oreochromis_niloticus
ENSIPUG00000021150	srrt	51	82.237	ENSONIG00000004242	srrt	93	72.268	Oreochromis_niloticus
ENSIPUG00000021150	srrt	98	71.527	ENSORLG00000008120	srrt	93	71.152	Oryzias_latipes
ENSIPUG00000021150	srrt	98	71.642	ENSORLG00020003058	srrt	93	71.463	Oryzias_latipes_hni
ENSIPUG00000021150	srrt	98	71.527	ENSORLG00015008062	srrt	93	71.342	Oryzias_latipes_hsok
ENSIPUG00000021150	srrt	93	56.401	ENSOMEG00000006963	-	93	56.024	Oryzias_melastigma
ENSIPUG00000021150	srrt	98	71.986	ENSOMEG00000003155	srrt	88	82.314	Oryzias_melastigma
ENSIPUG00000021150	srrt	51	76.017	ENSOGAG00000017242	SRRT	53	75.161	Otolemur_garnettii
ENSIPUG00000021150	srrt	51	76.940	ENSOARG00000015645	SRRT	53	76.940	Ovis_aries
ENSIPUG00000021150	srrt	51	76.509	ENSPPRG00000009557	SRRT	53	76.509	Panthera_pardus
ENSIPUG00000021150	srrt	51	76.017	ENSPTIG00000014355	SRRT	53	75.161	Panthera_tigris_altaica
ENSIPUG00000021150	srrt	98	78.143	ENSPKIG00000005434	srrt	92	78.443	Paramormyrops_kingsleyae
ENSIPUG00000021150	srrt	94	72.899	ENSPKIG00000022212	-	93	73.174	Paramormyrops_kingsleyae
ENSIPUG00000021150	srrt	95	64.982	ENSPSIG00000016311	SRRT	53	76.139	Pelodiscus_sinensis
ENSIPUG00000021150	srrt	51	78.166	ENSPEMG00000010834	Srrt	52	78.166	Peromyscus_maniculatus_bairdii
ENSIPUG00000021150	srrt	96	54.100	ENSPMAG00000009614	-	56	62.552	Petromyzon_marinus
ENSIPUG00000021150	srrt	51	74.732	ENSPCIG00000000816	SRRT	53	74.732	Phascolarctos_cinereus
ENSIPUG00000021150	srrt	51	63.913	ENSPFOG00000016554	-	55	62.661	Poecilia_formosa
ENSIPUG00000021150	srrt	95	74.178	ENSPFOG00000005704	srrt	93	74.427	Poecilia_formosa
ENSIPUG00000021150	srrt	74	63.557	ENSPLAG00000004526	-	55	62.313	Poecilia_latipinna
ENSIPUG00000021150	srrt	95	74.035	ENSPLAG00000021992	srrt	93	73.798	Poecilia_latipinna
ENSIPUG00000021150	srrt	95	74.178	ENSPMEG00000001182	srrt	93	74.427	Poecilia_mexicana
ENSIPUG00000021150	srrt	95	73.944	ENSPREG00000022308	srrt	93	74.186	Poecilia_reticulata
ENSIPUG00000021150	srrt	51	76.509	ENSPCOG00000025751	SRRT	53	76.509	Propithecus_coquereli
ENSIPUG00000021150	srrt	66	67.452	ENSPVAG00000000834	SRRT	92	66.595	Pteropus_vampyrus
ENSIPUG00000021150	srrt	96	65.318	ENSPNAG00000010629	srrt	91	67.184	Pygocentrus_nattereri
ENSIPUG00000021150	srrt	51	66.594	ENSRNOG00000048277	AABR07035787.1	92	65.727	Rattus_norvegicus
ENSIPUG00000021150	srrt	51	76.509	ENSSBOG00000033570	SRRT	53	76.509	Saimiri_boliviensis_boliviensis
ENSIPUG00000021150	srrt	72	62.896	ENSSHAG00000007349	-	74	74.894	Sarcophilus_harrisii
ENSIPUG00000021150	srrt	94	79.053	ENSSFOG00015017293	srrt	92	80.120	Scleropages_formosus
ENSIPUG00000021150	srrt	95	73.302	ENSSMAG00000015342	srrt	93	74.548	Scophthalmus_maximus
ENSIPUG00000021150	srrt	95	73.081	ENSSDUG00000012049	srrt	92	72.289	Seriola_dumerili
ENSIPUG00000021150	srrt	51	56.356	ENSSDUG00000002051	-	94	56.568	Seriola_dumerili
ENSIPUG00000021150	srrt	82	81.718	ENSSLDG00000017477	srrt	84	82.857	Seriola_lalandi_dorsalis
ENSIPUG00000021150	srrt	95	74.560	ENSSPAG00000005665	srrt	91	75.000	Stegastes_partitus
ENSIPUG00000021150	srrt	51	58.478	ENSSPAG00000018943	-	94	57.543	Stegastes_partitus
ENSIPUG00000021150	srrt	98	72.241	ENSTRUG00000016075	srrt	93	71.856	Takifugu_rubripes
ENSIPUG00000021150	srrt	93	53.025	ENSTNIG00000003111	-	53	65.584	Tetraodon_nigroviridis
ENSIPUG00000021150	srrt	74	65.441	ENSTNIG00000011779	srrt	100	65.538	Tetraodon_nigroviridis
ENSIPUG00000021150	srrt	59	78.723	ENSTBEG00000005212	SRRT	57	78.723	Tupaia_belangeri
ENSIPUG00000021150	srrt	51	76.231	ENSTTRG00000011104	SRRT	53	75.375	Tursiops_truncatus
ENSIPUG00000021150	srrt	51	76.017	ENSUAMG00000027997	SRRT	55	75.161	Ursus_americanus
ENSIPUG00000021150	srrt	51	76.017	ENSUMAG00000011295	SRRT	53	75.161	Ursus_maritimus
ENSIPUG00000021150	srrt	96	65.247	ENSVVUG00000023572	SRRT	53	74.946	Vulpes_vulpes
ENSIPUG00000021150	srrt	80	76.966	ENSXETG00000025124	srrt	69	77.444	Xenopus_tropicalis
ENSIPUG00000021150	srrt	52	52.361	ENSXCOG00000013105	-	92	52.268	Xiphophorus_couchianus
ENSIPUG00000021150	srrt	98	74.253	ENSXMAG00000007627	srrt	87	80.694	Xiphophorus_maculatus
ENSIPUG00000021150	srrt	51	63.319	ENSXMAG00000002090	-	55	62.716	Xiphophorus_maculatus