EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000021202 (Gene tree)
Gene ID: 108273549
Gene Symbol: drosha
Alias: drosha|im:7150667|rnasen|zgc:158612
Full Name: drosha ribonuclease III
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 31697 bases
Position: chr13:26463661-26495357
Accession: 108273549
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000031611	Ribonuclease_3	PF00636.26	5.1e-43	1	2
ENSIPUP00000031611	Ribonuclease_3	PF00636.26	5.1e-43	2	2
ENSIPUP00000031637	Ribonuclease_3	PF00636.26	5.2e-43	1	2
ENSIPUP00000031637	Ribonuclease_3	PF00636.26	5.2e-43	2	2
ENSIPUP00000031611	dsrm	PF00035.26	9.8e-15	1	1
ENSIPUP00000031637	dsrm	PF00035.26	1.1e-14	1	1
ENSIPUP00000031611	Ribonucleas_3_3	PF14622.6	7.4e-45	1	2
ENSIPUP00000031611	Ribonucleas_3_3	PF14622.6	7.4e-45	2	2
ENSIPUP00000031637	Ribonucleas_3_3	PF14622.6	7.4e-45	1	2
ENSIPUP00000031637	Ribonucleas_3_3	PF14622.6	7.4e-45	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000032898	-	3819	XM_017482822	ENSIPUP00000031637	1272 (aa)	XP_017338311	-
ENSIPUT00000032872	-	3834	-	ENSIPUP00000031611	1277 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000021202's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000021202's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000021202	drosha	90	79.209	ENSG00000113360	DROSHA	84	82.379	Homo_sapiens
ENSIPUG00000021202	drosha	90	76.961	ENSAMEG00000006000	DROSHA	71	89.164	Ailuropoda_melanoleuca
ENSIPUG00000021202	drosha	75	90.349	ENSACIG00000019308	drosha	95	90.196	Amphilophus_citrinellus
ENSIPUG00000021202	drosha	100	76.152	ENSATEG00000021939	drosha	88	81.150	Anabas_testudineus
ENSIPUG00000021202	drosha	90	76.451	ENSANAG00000020506	DROSHA	94	85.759	Aotus_nancymaae
ENSIPUG00000021202	drosha	99	77.927	ENSACLG00000012227	drosha	89	81.674	Astatotilapia_calliptera
ENSIPUG00000021202	drosha	100	81.264	ENSAMXG00000005582	drosha	100	81.961	Astyanax_mexicanus
ENSIPUG00000021202	drosha	66	36.322	WBGene00009163	drsh-1	76	36.710	Caenorhabditis_elegans
ENSIPUG00000021202	drosha	90	79.226	ENSCJAG00000018881	DROSHA	82	82.291	Callithrix_jacchus
ENSIPUG00000021202	drosha	90	79.121	ENSCAFG00020017559	DROSHA	96	90.497	Canis_lupus_dingo
ENSIPUG00000021202	drosha	100	71.734	ENSCPOG00000015051	DROSHA	75	89.370	Cavia_porcellus
ENSIPUG00000021202	drosha	90	79.142	ENSCCAG00000027283	DROSHA	95	89.061	Cebus_capucinus
ENSIPUG00000021202	drosha	90	79.125	ENSCATG00000016833	DROSHA	95	87.822	Cercocebus_atys
ENSIPUG00000021202	drosha	93	77.896	ENSCLAG00000013048	DROSHA	83	81.970	Chinchilla_lanigera
ENSIPUG00000021202	drosha	90	79.125	ENSCSAG00000017202	DROSHA	81	82.291	Chlorocebus_sabaeus
ENSIPUG00000021202	drosha	57	99.351	ENSCHOG00000011786	DROSHA	63	79.180	Choloepus_hoffmanni
ENSIPUG00000021202	drosha	99	73.641	ENSCPBG00000000467	DROSHA	87	79.511	Chrysemys_picta_bellii
ENSIPUG00000021202	drosha	64	56.454	ENSCSAVG00000010638	-	99	56.870	Ciona_savignyi
ENSIPUG00000021202	drosha	90	79.125	ENSCANG00000035071	DROSHA	95	87.822	Colobus_angolensis_palliatus
ENSIPUG00000021202	drosha	88	76.485	ENSCGRG00001008885	Drosha	71	88.958	Cricetulus_griseus_chok1gshd
ENSIPUG00000021202	drosha	88	76.485	ENSCGRG00000006944	Drosha	71	88.958	Cricetulus_griseus_crigri
ENSIPUG00000021202	drosha	99	77.441	ENSCSEG00000001452	drosha	85	84.562	Cynoglossus_semilaevis
ENSIPUG00000021202	drosha	99	77.753	ENSCVAG00000004619	drosha	88	82.343	Cyprinodon_variegatus
ENSIPUG00000021202	drosha	88	83.767	ENSDARG00000055563	drosha	90	82.811	Danio_rerio
ENSIPUG00000021202	drosha	88	78.620	ENSDORG00000005624	Drosha	85	80.052	Dipodomys_ordii
ENSIPUG00000021202	drosha	83	93.258	ENSETEG00000007814	DROSHA	62	93.258	Echinops_telfairi
ENSIPUG00000021202	drosha	52	77.386	ENSEBUG00000005974	-	98	78.125	Eptatretus_burgeri
ENSIPUG00000021202	drosha	90	79.357	ENSEASG00005007149	DROSHA	84	82.467	Equus_asinus_asinus
ENSIPUG00000021202	drosha	90	79.357	ENSECAG00000013578	DROSHA	82	82.467	Equus_caballus
ENSIPUG00000021202	drosha	79	79.135	ENSEEUG00000006351	DROSHA	70	84.520	Erinaceus_europaeus
ENSIPUG00000021202	drosha	95	73.606	ENSELUG00000015039	drosha	95	70.102	Esox_lucius
ENSIPUG00000021202	drosha	90	79.188	ENSFCAG00000000360	DROSHA	84	82.379	Felis_catus
ENSIPUG00000021202	drosha	100	72.741	ENSFALG00000012843	DROSHA	88	76.694	Ficedula_albicollis
ENSIPUG00000021202	drosha	90	79.795	ENSFDAG00000018414	DROSHA	83	81.882	Fukomys_damarensis
ENSIPUG00000021202	drosha	88	66.525	ENSFHEG00000003840	drosha	83	69.447	Fundulus_heteroclitus
ENSIPUG00000021202	drosha	100	73.270	ENSGALG00000012916	DROSHA	88	79.360	Gallus_gallus
ENSIPUG00000021202	drosha	85	85.574	ENSGAFG00000016853	drosha	90	82.318	Gambusia_affinis
ENSIPUG00000021202	drosha	99	73.716	ENSGAGG00000005621	DROSHA	87	79.983	Gopherus_agassizii
ENSIPUG00000021202	drosha	90	79.209	ENSGGOG00000011006	DROSHA	95	87.926	Gorilla_gorilla
ENSIPUG00000021202	drosha	94	77.145	ENSHBUG00000015907	drosha	88	85.714	Haplochromis_burtoni
ENSIPUG00000021202	drosha	90	79.881	ENSHGLG00000018873	DROSHA	82	82.578	Heterocephalus_glaber_female
ENSIPUG00000021202	drosha	90	79.881	ENSHGLG00100015793	DROSHA	81	81.882	Heterocephalus_glaber_male
ENSIPUG00000021202	drosha	87	81.121	ENSHCOG00000008454	drosha	97	81.002	Hippocampus_comes
ENSIPUG00000021202	drosha	75	85.553	ENSSTOG00000016323	DROSHA	100	95.749	Ictidomys_tridecemlineatus
ENSIPUG00000021202	drosha	90	76.341	ENSJJAG00000019758	Drosha	71	89.061	Jaculus_jaculus
ENSIPUG00000021202	drosha	100	75.075	ENSLBEG00000006606	drosha	88	80.068	Labrus_bergylta
ENSIPUG00000021202	drosha	99	74.212	ENSLACG00000005937	DROSHA	87	80.678	Latimeria_chalumnae
ENSIPUG00000021202	drosha	100	75.703	ENSLOCG00000012852	drosha	87	81.296	Lepisosteus_oculatus
ENSIPUG00000021202	drosha	92	75.463	ENSLAFG00000013831	DROSHA	78	89.164	Loxodonta_africana
ENSIPUG00000021202	drosha	90	79.125	ENSMFAG00000003055	DROSHA	84	80.834	Macaca_fascicularis
ENSIPUG00000021202	drosha	90	79.125	ENSMMUG00000012193	DROSHA	95	89.267	Macaca_mulatta
ENSIPUG00000021202	drosha	90	79.040	ENSMNEG00000037529	DROSHA	83	81.233	Macaca_nemestrina
ENSIPUG00000021202	drosha	90	73.591	ENSMLEG00000024167	DROSHA	83	76.496	Mandrillus_leucophaeus
ENSIPUG00000021202	drosha	99	76.917	ENSMAMG00000012613	drosha	95	88.958	Mastacembelus_armatus
ENSIPUG00000021202	drosha	99	77.927	ENSMZEG00005019487	drosha	89	81.674	Maylandia_zebra
ENSIPUG00000021202	drosha	100	73.196	ENSMGAG00000005087	DROSHA	88	78.649	Meleagris_gallopavo
ENSIPUG00000021202	drosha	88	76.480	ENSMAUG00000002863	Drosha	80	81.115	Mesocricetus_auratus
ENSIPUG00000021202	drosha	90	76.917	ENSMICG00000002241	DROSHA	95	84.694	Microcebus_murinus
ENSIPUG00000021202	drosha	88	77.126	ENSMOCG00000015044	Drosha	71	88.958	Microtus_ochrogaster
ENSIPUG00000021202	drosha	75	85.670	ENSMMOG00000004016	drosha	95	85.567	Mola_mola
ENSIPUG00000021202	drosha	85	79.160	ENSMODG00000004807	DROSHA	84	80.329	Monodelphis_domestica
ENSIPUG00000021202	drosha	100	78.476	ENSMALG00000010542	drosha	88	82.840	Monopterus_albus
ENSIPUG00000021202	drosha	90	76.389	MGP_CAROLIEiJ_G0019687	Drosha	95	88.958	Mus_caroli
ENSIPUG00000021202	drosha	90	75.566	ENSMUSG00000022191	Drosha	71	89.061	Mus_musculus
ENSIPUG00000021202	drosha	90	75.000	MGP_PahariEiJ_G0016063	Drosha	95	88.958	Mus_pahari
ENSIPUG00000021202	drosha	90	76.773	MGP_SPRETEiJ_G0020580	Drosha	95	89.164	Mus_spretus
ENSIPUG00000021202	drosha	90	76.206	ENSMPUG00000015237	DROSHA	70	89.267	Mustela_putorius_furo
ENSIPUG00000021202	drosha	93	74.780	ENSMLUG00000002581	DROSHA	70	87.926	Myotis_lucifugus
ENSIPUG00000021202	drosha	87	71.356	ENSNGAG00000017329	Drosha	69	82.236	Nannospalax_galili
ENSIPUG00000021202	drosha	77	71.116	ENSNBRG00000001870	drosha	95	72.577	Neolamprologus_brichardi
ENSIPUG00000021202	drosha	90	76.653	ENSNLEG00000013963	DROSHA	95	87.822	Nomascus_leucogenys
ENSIPUG00000021202	drosha	69	71.508	ENSMEUG00000002029	DROSHA	68	72.395	Notamacropus_eugenii
ENSIPUG00000021202	drosha	73	86.207	ENSOPRG00000010845	DROSHA	64	86.207	Ochotona_princeps
ENSIPUG00000021202	drosha	89	76.617	ENSODEG00000001911	DROSHA	70	89.061	Octodon_degus
ENSIPUG00000021202	drosha	99	75.971	ENSONIG00000006578	drosha	89	78.398	Oreochromis_niloticus
ENSIPUG00000021202	drosha	59	76.765	ENSOANG00000015744	-	100	76.765	Ornithorhynchus_anatinus
ENSIPUG00000021202	drosha	94	76.842	ENSOCUG00000000367	DROSHA	82	82.551	Oryctolagus_cuniculus
ENSIPUG00000021202	drosha	97	77.623	ENSORLG00000013592	drosha	88	80.948	Oryzias_latipes
ENSIPUG00000021202	drosha	75	88.741	ENSORLG00020002854	drosha	95	89.430	Oryzias_latipes_hni
ENSIPUG00000021202	drosha	75	89.857	ENSORLG00015003156	drosha	95	90.093	Oryzias_latipes_hsok
ENSIPUG00000021202	drosha	86	84.417	ENSOMEG00000001062	drosha	89	81.579	Oryzias_melastigma
ENSIPUG00000021202	drosha	90	79.209	ENSPPAG00000037526	DROSHA	95	87.241	Pan_paniscus
ENSIPUG00000021202	drosha	90	79.188	ENSPPRG00000002687	DROSHA	84	82.379	Panthera_pardus
ENSIPUG00000021202	drosha	90	79.188	ENSPTIG00000017523	DROSHA	84	82.379	Panthera_tigris_altaica
ENSIPUG00000021202	drosha	90	79.209	ENSPTRG00000016762	DROSHA	84	82.379	Pan_troglodytes
ENSIPUG00000021202	drosha	90	79.125	ENSPANG00000003027	DROSHA	84	80.834	Papio_anubis
ENSIPUG00000021202	drosha	100	78.657	ENSPKIG00000011514	drosha	88	83.347	Paramormyrops_kingsleyae
ENSIPUG00000021202	drosha	91	75.337	ENSPEMG00000000607	Drosha	80	80.683	Peromyscus_maniculatus_bairdii
ENSIPUG00000021202	drosha	85	80.665	ENSPCIG00000006010	DROSHA	81	82.374	Phascolarctos_cinereus
ENSIPUG00000021202	drosha	85	85.284	ENSPREG00000022302	drosha	90	82.542	Poecilia_reticulata
ENSIPUG00000021202	drosha	90	77.529	ENSPPYG00000015370	DROSHA	70	89.360	Pongo_abelii
ENSIPUG00000021202	drosha	79	89.744	ENSPCAG00000007190	DROSHA	59	89.744	Procavia_capensis
ENSIPUG00000021202	drosha	90	75.694	ENSPCOG00000028511	DROSHA	94	85.139	Propithecus_coquereli
ENSIPUG00000021202	drosha	90	71.872	ENSPVAG00000013167	DROSHA	71	83.884	Pteropus_vampyrus
ENSIPUG00000021202	drosha	99	77.778	ENSPNYG00000000398	drosha	95	89.016	Pundamilia_nyererei
ENSIPUG00000021202	drosha	91	89.316	ENSPNAG00000011876	drosha	96	89.717	Pygocentrus_nattereri
ENSIPUG00000021202	drosha	89	75.915	ENSRNOG00000013451	Drosha	71	89.164	Rattus_norvegicus
ENSIPUG00000021202	drosha	90	77.881	ENSRBIG00000032786	DROSHA	94	85.640	Rhinopithecus_bieti
ENSIPUG00000021202	drosha	90	79.125	ENSRROG00000028199	DROSHA	82	82.291	Rhinopithecus_roxellana
ENSIPUG00000021202	drosha	90	79.864	ENSSBOG00000024008	DROSHA	95	87.410	Saimiri_boliviensis_boliviensis
ENSIPUG00000021202	drosha	85	79.602	ENSSHAG00000015198	DROSHA	92	89.380	Sarcophilus_harrisii
ENSIPUG00000021202	drosha	100	76.336	ENSSFOG00015009776	drosha	90	82.103	Scleropages_formosus
ENSIPUG00000021202	drosha	90	79.723	ENSSMAG00000008069	drosha	86	81.371	Scophthalmus_maximus
ENSIPUG00000021202	drosha	100	77.566	ENSSDUG00000010944	drosha	95	91.031	Seriola_dumerili
ENSIPUG00000021202	drosha	100	77.460	ENSSLDG00000025271	drosha	95	90.928	Seriola_lalandi_dorsalis
ENSIPUG00000021202	drosha	68	83.333	ENSSARG00000004436	-	59	83.333	Sorex_araneus
ENSIPUG00000021202	drosha	99	69.134	ENSSPUG00000006902	DROSHA	87	75.422	Sphenodon_punctatus
ENSIPUG00000021202	drosha	88	80.517	ENSSSCG00000016809	DROSHA	84	82.692	Sus_scrofa
ENSIPUG00000021202	drosha	100	72.090	ENSTGUG00000001955	DROSHA	89	75.777	Taeniopygia_guttata
ENSIPUG00000021202	drosha	93	74.363	ENSTRUG00000017778	drosha	85	81.526	Takifugu_rubripes
ENSIPUG00000021202	drosha	100	76.362	ENSTNIG00000008688	drosha	95	89.630	Tetraodon_nigroviridis
ENSIPUG00000021202	drosha	77	73.199	ENSTBEG00000000537	DROSHA	69	80.043	Tupaia_belangeri
ENSIPUG00000021202	drosha	88	77.479	ENSTTRG00000004210	DROSHA	80	81.115	Tursiops_truncatus
ENSIPUG00000021202	drosha	90	79.442	ENSUAMG00000025257	DROSHA	84	82.467	Ursus_americanus
ENSIPUG00000021202	drosha	90	79.442	ENSUMAG00000014097	DROSHA	95	90.643	Ursus_maritimus
ENSIPUG00000021202	drosha	90	79.272	ENSVVUG00000022212	DROSHA	99	90.233	Vulpes_vulpes
ENSIPUG00000021202	drosha	100	70.996	ENSXETG00000016701	drosha	87	76.305	Xenopus_tropicalis