EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000021244 (Gene tree)
Gene ID
108278870
Gene Symbol
-
Alias
-
Full Name
polyadenylate-binding protein 1-like
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Minus strand
Length
7220 bases
Position
chr18:12799704-12806923
Accession
108278870
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000031554RRM_5PF13893.63.5e-1112
ENSIPUP00000031554RRM_5PF13893.63.5e-1122
ENSIPUP00000031554RRM_1PF00076.221.8e-8414
ENSIPUP00000031554RRM_1PF00076.221.8e-8424
ENSIPUP00000031554RRM_1PF00076.221.8e-8434
ENSIPUP00000031554RRM_1PF00076.221.8e-8444
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000032815-2556XM_017492540ENSIPUP00000031554682 (aa)XP_017348029A0A2D0SZD1
Gene Model
Click here to download ENSIPUG00000021244's gene model file
Pathways
Pathway IDPathway NameSource
ipu03013RNA transportKEGG
ipu03015mRNA surveillance pathwayKEGG
ipu03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000021244's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000021244-5130.994ENSIPUG00000016702tia17830.994
ENSIPUG00000021244-5334.641ENSIPUG00000012337elavl28534.641
ENSIPUG00000021244-5132.955ENSIPUG00000000913celf55430.476
ENSIPUG00000021244-5447.038ENSIPUG00000019895-5347.038
ENSIPUG00000021244-5230.247ENSIPUG00000014082elavl1a9030.247
ENSIPUG00000021244-5132.955ENSIPUG00000017915celf5b5430.693
ENSIPUG00000021244-8260.294ENSIPUG00000018724-9660.294
ENSIPUG00000021244-5271.023ENSIPUG00000006760-8871.023
ENSIPUG00000021244-5336.612ENSIPUG00000012242Sf3b45734.444
ENSIPUG00000021244-5560.881ENSIPUG00000016620pabpc46160.881
ENSIPUG00000021244-6556.904ENSIPUG00000008848pabpc1a7656.904
ENSIPUG00000021244-5234.641ENSIPUG00000001381elavl48334.641
ENSIPUG00000021244-5958.542ENSIPUG00000010791-7358.542
ENSIPUG00000021244-5271.591ENSIPUG00000006780-8571.591
ENSIPUG00000021244-5230.909ENSIPUG00000015781elavl1b8530.909
ENSIPUG00000021244-5450.549ENSIPUG00000024284-8249.129
ENSIPUG00000021244-7749.183ENSIPUG00000012602pabpc1l7057.073
ENSIPUG00000021244-5130.000ENSIPUG00000021261tial17230.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000021244-5260.309ENSG00000184388PABPC1L2B9860.309Homo_sapiens
ENSIPUG00000021244-5260.309ENSG00000186288PABPC1L2A9860.309Homo_sapiens
ENSIPUG00000021244-6555.301ENSAPOG00000015105pabpc1a7555.301Acanthochromis_polyacanthus
ENSIPUG00000021244-6555.324ENSAPOG00000017776pabpc1b7257.955Acanthochromis_polyacanthus
ENSIPUG00000021244-5260.309ENSAMEG00000019441-9860.309Ailuropoda_melanoleuca
ENSIPUG00000021244-6555.717ENSACIG00000004685pabpc1a7555.717Amphilophus_citrinellus
ENSIPUG00000021244-5564.567ENSACIG00000018366pabpc1b6164.567Amphilophus_citrinellus
ENSIPUG00000021244-6555.301ENSAOCG00000011656pabpc1a7555.301Amphiprion_ocellaris
ENSIPUG00000021244-6554.906ENSAOCG00000019839pabpc1b7454.906Amphiprion_ocellaris
ENSIPUG00000021244-6554.906ENSAPEG00000010435pabpc1b7454.906Amphiprion_percula
ENSIPUG00000021244-6555.301ENSAPEG00000006963pabpc1a7555.301Amphiprion_percula
ENSIPUG00000021244-6555.042ENSATEG00000012917pabpc1b7455.042Anabas_testudineus
ENSIPUG00000021244-6555.301ENSATEG00000024852pabpc1a7555.509Anabas_testudineus
ENSIPUG00000021244-5260.309ENSANAG00000019431-9860.309Aotus_nancymaae
ENSIPUG00000021244-5260.309ENSANAG00000019429-9860.309Aotus_nancymaae
ENSIPUG00000021244-6555.717ENSACLG00000009399pabpc1a7064.641Astatotilapia_calliptera
ENSIPUG00000021244-6655.010ENSACLG00000014335pabpc1b7455.532Astatotilapia_calliptera
ENSIPUG00000021244-6555.021ENSAMXG00000008599pabpc1b7455.021Astyanax_mexicanus
ENSIPUG00000021244-5360.302ENSBTAG00000050902-9660.302Bos_taurus
ENSIPUG00000021244-5360.000ENSBTAG00000052491-9560.000Bos_taurus
ENSIPUG00000021244-5260.309ENSCJAG00000041326-9860.309Callithrix_jacchus
ENSIPUG00000021244-5359.799ENSCAFG00020002052-9659.799Canis_lupus_dingo
ENSIPUG00000021244-5260.825ENSCHIG00000006283-9860.825Capra_hircus
ENSIPUG00000021244-5260.309ENSCHIG00000011138-9860.309Capra_hircus
ENSIPUG00000021244-5260.309ENSTSYG00000001775-9860.309Carlito_syrichta
ENSIPUG00000021244-5259.184ENSCPOG00000009525-9859.794Cavia_porcellus
ENSIPUG00000021244-5260.309ENSCCAG00000031524-9860.309Cebus_capucinus
ENSIPUG00000021244-5260.309ENSCATG00000043125-9860.309Cercocebus_atys
ENSIPUG00000021244-5260.309ENSCATG00000042826-9860.309Cercocebus_atys
ENSIPUG00000021244-5259.184ENSCLAG00000017412-9859.794Chinchilla_lanigera
ENSIPUG00000021244-5259.184ENSCLAG00000017409-9859.794Chinchilla_lanigera
ENSIPUG00000021244-5260.309ENSCSAG00000000102-9860.309Chlorocebus_sabaeus
ENSIPUG00000021244-5362.712ENSCGRG00001023387-9758.586Cricetulus_griseus_chok1gshd
ENSIPUG00000021244-6554.886ENSCSEG00000013324pabpc1a7554.886Cynoglossus_semilaevis
ENSIPUG00000021244-5563.255ENSCSEG00000015241-6063.255Cynoglossus_semilaevis
ENSIPUG00000021244-6555.094ENSCVAG00000005489pabpc1b7455.094Cyprinodon_variegatus
ENSIPUG00000021244-6355.769ENSCVAG00000021872pabpc1a7555.717Cyprinodon_variegatus
ENSIPUG00000021244-6655.533ENSDARG00000021140pabpc1b9568.000Danio_rerio
ENSIPUG00000021244-6555.021ENSDARG00000017219pabpc1a7455.021Danio_rerio
ENSIPUG00000021244-5260.847ENSDNOG00000030926-9860.847Dasypus_novemcinctus
ENSIPUG00000021244-5259.694ENSDORG00000011362-9860.309Dipodomys_ordii
ENSIPUG00000021244-5359.799ENSEASG00005010399-9659.799Equus_asinus_asinus
ENSIPUG00000021244-5359.799ENSECAG00000002620-9659.799Equus_caballus
ENSIPUG00000021244-5257.653ENSEEUG00000008203-9858.247Erinaceus_europaeus
ENSIPUG00000021244-6554.470ENSELUG00000015062-7454.470Esox_lucius
ENSIPUG00000021244-6853.069ENSELUG00000003614pabpc1a7554.792Esox_lucius
ENSIPUG00000021244-5248.198ENSELUG00000005389-9548.198Esox_lucius
ENSIPUG00000021244-5260.309ENSFCAG00000039701-9860.309Felis_catus
ENSIPUG00000021244-5259.184ENSFDAG00000005484-9859.794Fukomys_damarensis
ENSIPUG00000021244-6555.925ENSFHEG00000018979pabpc1a7555.925Fundulus_heteroclitus
ENSIPUG00000021244-6555.324ENSFHEG00000008186pabpc1b7455.324Fundulus_heteroclitus
ENSIPUG00000021244-6554.393ENSGMOG00000013448pabpc1a7354.393Gadus_morhua
ENSIPUG00000021244-5462.730ENSGMOG00000002448-5962.730Gadus_morhua
ENSIPUG00000021244-6057.143ENSGAFG00000019750pabpc1a7358.087Gambusia_affinis
ENSIPUG00000021244-6555.532ENSGAFG00000010193pabpc1b7855.532Gambusia_affinis
ENSIPUG00000021244-6952.941ENSGACG00000003572pabpc1a7554.886Gasterosteus_aculeatus
ENSIPUG00000021244-6554.489ENSGACG00000003771pabpc1b8253.593Gasterosteus_aculeatus
ENSIPUG00000021244-5260.309ENSGGOG00000038606-9860.309Gorilla_gorilla
ENSIPUG00000021244-5260.309ENSGGOG00000043933-9860.309Gorilla_gorilla
ENSIPUG00000021244-6655.010ENSHBUG00000002075pabpc1b7457.048Haplochromis_burtoni
ENSIPUG00000021244-6555.717ENSHBUG00000020487pabpc1a7064.641Haplochromis_burtoni
ENSIPUG00000021244-5259.184ENSHGLG00000019668-9859.794Heterocephalus_glaber_female
ENSIPUG00000021244-5259.184ENSHGLG00000019762-9859.794Heterocephalus_glaber_female
ENSIPUG00000021244-5259.184ENSHGLG00100020854-9859.794Heterocephalus_glaber_male
ENSIPUG00000021244-5657.868ENSHCOG00000003175pabpc1b7457.868Hippocampus_comes
ENSIPUG00000021244-6555.509ENSHCOG00000013502pabpc1a7555.509Hippocampus_comes
ENSIPUG00000021244-5260.309ENSSTOG00000026028-9860.309Ictidomys_tridecemlineatus
ENSIPUG00000021244-5260.309ENSSTOG00000022096-9860.309Ictidomys_tridecemlineatus
ENSIPUG00000021244-5259.184ENSJJAG00000007037-9859.794Jaculus_jaculus
ENSIPUG00000021244-6555.509ENSKMAG00000000605pabpc1a7555.509Kryptolebias_marmoratus
ENSIPUG00000021244-6555.324ENSKMAG00000008049pabpc1b7558.409Kryptolebias_marmoratus
ENSIPUG00000021244-6752.964ENSLBEG00000024002-7554.678Labrus_bergylta
ENSIPUG00000021244-6555.532ENSLBEG00000026845pabpc1b7455.532Labrus_bergylta
ENSIPUG00000021244-5258.974ENSLAFG00000023096-9859.585Loxodonta_africana
ENSIPUG00000021244-5260.000ENSMFAG00000028878-9860.000Macaca_fascicularis
ENSIPUG00000021244-5260.309ENSMMUG00000039929-9860.309Macaca_mulatta
ENSIPUG00000021244-5260.309ENSMMUG00000009740-9860.309Macaca_mulatta
ENSIPUG00000021244-5260.309ENSMMUG00000037681-9860.309Macaca_mulatta
ENSIPUG00000021244-5260.309ENSMNEG00000037732-9860.309Macaca_nemestrina
ENSIPUG00000021244-5260.309ENSMLEG00000027495-9860.309Mandrillus_leucophaeus
ENSIPUG00000021244-6555.324ENSMAMG00000014610pabpc1b7455.324Mastacembelus_armatus
ENSIPUG00000021244-6555.094ENSMAMG00000004502-7064.365Mastacembelus_armatus
ENSIPUG00000021244-6655.010ENSMZEG00005026745pabpc1b7455.532Maylandia_zebra
ENSIPUG00000021244-6555.717ENSMZEG00005025416pabpc1a7064.641Maylandia_zebra
ENSIPUG00000021244-5260.309ENSMICG00000047642-9860.309Microcebus_murinus
ENSIPUG00000021244-5563.812ENSMMOG00000018044pabpc1a7063.812Mola_mola
ENSIPUG00000021244-6056.502ENSMMOG00000018009pabpc1b7556.502Mola_mola
ENSIPUG00000021244-5457.218ENSMODG00000015024-6057.218Monodelphis_domestica
ENSIPUG00000021244-5461.155ENSMODG00000013156-6259.446Monodelphis_domestica
ENSIPUG00000021244-6555.532ENSMALG00000006066pabpc1b8155.532Monopterus_albus
ENSIPUG00000021244-6555.094ENSMALG00000013020-7657.528Monopterus_albus
ENSIPUG00000021244-5264.000ENSNGAG00000012688-9859.794Nannospalax_galili
ENSIPUG00000021244-5564.641ENSNBRG00000003068-7064.641Neolamprologus_brichardi
ENSIPUG00000021244-6754.656ENSNBRG00000013737pabpc1b7557.623Neolamprologus_brichardi
ENSIPUG00000021244-5260.309ENSNLEG00000018128-9860.309Nomascus_leucogenys
ENSIPUG00000021244-5258.763ENSODEG00000018540-9858.763Octodon_degus
ENSIPUG00000021244-6057.366ENSONIG00000006871-7157.366Oreochromis_niloticus
ENSIPUG00000021244-6555.532ENSONIG00000002717pabpc1b7455.532Oreochromis_niloticus
ENSIPUG00000021244-5260.309ENSOCUG00000002565-9860.309Oryctolagus_cuniculus
ENSIPUG00000021244-6554.470ENSORLG00000002691pabpc1a8356.941Oryzias_latipes
ENSIPUG00000021244-6055.902ENSORLG00000003008-7155.902Oryzias_latipes
ENSIPUG00000021244-6554.678ENSORLG00020022398pabpc1a7554.678Oryzias_latipes_hni
ENSIPUG00000021244-6055.902ENSORLG00020022259-7155.902Oryzias_latipes_hni
ENSIPUG00000021244-6554.470ENSORLG00015013633pabpc17554.470Oryzias_latipes_hsok
ENSIPUG00000021244-6055.679ENSORLG00015010932-7155.679Oryzias_latipes_hsok
ENSIPUG00000021244-6355.556ENSOMEG00000020219pabpc1a7555.509Oryzias_melastigma
ENSIPUG00000021244-5360.446ENSOMEG00000013627pabpc1b7060.446Oryzias_melastigma
ENSIPUG00000021244-5260.309ENSOGAG00000026047-9860.309Otolemur_garnettii
ENSIPUG00000021244-5260.309ENSOGAG00000029513-9860.309Otolemur_garnettii
ENSIPUG00000021244-5260.825ENSOARG00000005943-9860.825Ovis_aries
ENSIPUG00000021244-5260.309ENSPPAG00000012920-9860.309Pan_paniscus
ENSIPUG00000021244-5260.309ENSPPRG00000011804-9860.309Panthera_pardus
ENSIPUG00000021244-5260.309ENSPPRG00000011809-9860.309Panthera_pardus
ENSIPUG00000021244-5260.309ENSPTRG00000028252-9860.309Pan_troglodytes
ENSIPUG00000021244-5260.309ENSPANG00000011549-9860.309Papio_anubis
ENSIPUG00000021244-6058.559ENSPKIG00000005676pabpc1b7058.559Paramormyrops_kingsleyae
ENSIPUG00000021244-6255.773ENSPMGG00000022487pabpc1a9455.773Periophthalmus_magnuspinnatus
ENSIPUG00000021244-5956.293ENSPMGG00000023134-9555.909Periophthalmus_magnuspinnatus
ENSIPUG00000021244-6355.983ENSPFOG00000010815pabpc1a7355.925Poecilia_formosa
ENSIPUG00000021244-6555.532ENSPFOG00000005917pabpc1b7455.532Poecilia_formosa
ENSIPUG00000021244-6555.532ENSPLAG00000001388pabpc1b7455.532Poecilia_latipinna
ENSIPUG00000021244-6355.983ENSPLAG00000004114pabpc1a7555.925Poecilia_latipinna
ENSIPUG00000021244-6555.532ENSPMEG00000014399pabpc1b7455.532Poecilia_mexicana
ENSIPUG00000021244-6355.983ENSPMEG00000001334pabpc1a7555.925Poecilia_mexicana
ENSIPUG00000021244-6555.532ENSPREG00000010911pabpc1b7855.532Poecilia_reticulata
ENSIPUG00000021244-5564.365ENSPREG00000019595pabpc1a9565.185Poecilia_reticulata
ENSIPUG00000021244-5260.309ENSPPYG00000020468-9860.309Pongo_abelii
ENSIPUG00000021244-5260.309ENSPCAG00000005308-9860.309Procavia_capensis
ENSIPUG00000021244-5260.309ENSPCOG00000026349-9860.309Propithecus_coquereli
ENSIPUG00000021244-5260.000ENSPVAG00000016117-9860.000Pteropus_vampyrus
ENSIPUG00000021244-6555.717ENSPNYG00000005192pabpc1a7358.095Pundamilia_nyererei
ENSIPUG00000021244-6655.010ENSPNYG00000012578pabpc1b7457.048Pundamilia_nyererei
ENSIPUG00000021244-6555.882ENSPNAG00000028408pabpc1a7758.998Pygocentrus_nattereri
ENSIPUG00000021244-6455.368ENSPNAG00000024626pabpc1b7455.021Pygocentrus_nattereri
ENSIPUG00000021244-6753.427ENSRBIG00000028738-8358.014Rhinopithecus_bieti
ENSIPUG00000021244-5260.309ENSRBIG00000027173-9860.309Rhinopithecus_bieti
ENSIPUG00000021244-5260.309ENSRROG00000017404-9860.309Rhinopithecus_roxellana
ENSIPUG00000021244-5656.599ENSSHAG00000000511-6456.599Sarcophilus_harrisii
ENSIPUG00000021244-6556.067ENSSFOG00015006662pabpc1a7456.067Scleropages_formosus
ENSIPUG00000021244-5261.272ENSSFOG00015019668-6761.272Scleropages_formosus
ENSIPUG00000021244-6654.918ENSSFOG00015002752-7455.439Scleropages_formosus
ENSIPUG00000021244-6056.854ENSSMAG00000006869pabpc1b7454.071Scophthalmus_maximus
ENSIPUG00000021244-6752.569ENSSMAG00000010803pabpc1a7554.262Scophthalmus_maximus
ENSIPUG00000021244-6554.886ENSSDUG00000006675pabpc1a7555.094Seriola_dumerili
ENSIPUG00000021244-6057.684ENSSDUG00000011965pabpc1b7157.684Seriola_dumerili
ENSIPUG00000021244-6554.886ENSSLDG00000011661pabpc1a7555.094Seriola_lalandi_dorsalis
ENSIPUG00000021244-6554.959ENSSLDG00000014156pabpc1b7554.959Seriola_lalandi_dorsalis
ENSIPUG00000021244-6555.509ENSSPAG00000014453-7555.509Stegastes_partitus
ENSIPUG00000021244-6555.115ENSSPAG00000019265pabpc1b8054.906Stegastes_partitus
ENSIPUG00000021244-5260.309ENSSSCG00000032167-9860.309Sus_scrofa
ENSIPUG00000021244-5260.309ENSSSCG00000036336-9860.309Sus_scrofa
ENSIPUG00000021244-6057.883ENSTRUG00000011577-7057.883Takifugu_rubripes
ENSIPUG00000021244-6554.280ENSTRUG00000003767-7454.280Takifugu_rubripes
ENSIPUG00000021244-6952.756ENSTNIG00000009153pabpc1b7454.489Tetraodon_nigroviridis
ENSIPUG00000021244-5462.532ENSTNIG00000013307pabpc1a6062.532Tetraodon_nigroviridis
ENSIPUG00000021244-5260.309ENSTTRG00000013181-9860.309Tursiops_truncatus
ENSIPUG00000021244-5260.309ENSUAMG00000008089-9860.309Ursus_americanus
ENSIPUG00000021244-5260.309ENSUMAG00000003364-9860.309Ursus_maritimus
ENSIPUG00000021244-5454.416ENSUMAG00000023926-8953.186Ursus_maritimus
ENSIPUG00000021244-5359.296ENSVVUG00000015892-9859.296Vulpes_vulpes
ENSIPUG00000021244-6555.532ENSXCOG00000019901pabpc1b7755.532Xiphophorus_couchianus
ENSIPUG00000021244-5958.087ENSXCOG00000017066pabpc1a7358.087Xiphophorus_couchianus
ENSIPUG00000021244-6555.532ENSXMAG00000003753pabpc1b9063.957Xiphophorus_maculatus
ENSIPUG00000021244-6555.301ENSXMAG00000002555pabpc1a7555.509Xiphophorus_maculatus

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