EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000021370 (Gene tree)
Gene ID: 108266757
Gene Symbol: tsn
Alias: id:ibd2900|wu:fb38b07|wu:fi31h02|zgc:123170
Full Name: translin
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 1992 bases
Position: chr6:10976134-10978125
Accession: 108266757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000031786	Translin	PF01997.16	6.2e-55	1	1
ENSIPUP00000031799	Translin	PF01997.16	6.3e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000033064	-	684	-	ENSIPUP00000031799	227 (aa)	-	-
ENSIPUT00000033051	-	1389	XM_017470455	ENSIPUP00000031786	227 (aa)	XP_017325944	A0A2D0R5U5

Gene Model

Click here to download ENSIPUG00000021370's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000021370's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000021370	tsn	99	79.018	ENSG00000211460	TSN	98	79.018	Homo_sapiens
ENSIPUG00000021370	tsn	100	90.308	ENSAPOG00000002063	tsn	100	90.308	Acanthochromis_polyacanthus
ENSIPUG00000021370	tsn	99	79.464	ENSAMEG00000005055	TSN	98	79.464	Ailuropoda_melanoleuca
ENSIPUG00000021370	tsn	100	91.189	ENSACIG00000021694	tsn	100	91.189	Amphilophus_citrinellus
ENSIPUG00000021370	tsn	100	90.308	ENSAOCG00000015574	tsn	100	90.308	Amphiprion_ocellaris
ENSIPUG00000021370	tsn	100	90.308	ENSAPEG00000001677	tsn	100	90.308	Amphiprion_percula
ENSIPUG00000021370	tsn	100	90.308	ENSATEG00000004115	tsn	100	90.308	Anabas_testudineus
ENSIPUG00000021370	tsn	94	79.452	ENSACAG00000004757	TSN	99	79.452	Anolis_carolinensis
ENSIPUG00000021370	tsn	100	78.509	ENSANAG00000026842	TSN	100	78.509	Aotus_nancymaae
ENSIPUG00000021370	tsn	100	91.189	ENSACLG00000020831	tsn	100	91.189	Astatotilapia_calliptera
ENSIPUG00000021370	tsn	100	90.308	ENSAMXG00000035417	tsn	100	90.308	Astyanax_mexicanus
ENSIPUG00000021370	tsn	99	79.464	ENSBTAG00000006059	TSN	98	79.464	Bos_taurus
ENSIPUG00000021370	tsn	50	67.257	ENSCJAG00000008511	-	88	67.257	Callithrix_jacchus
ENSIPUG00000021370	tsn	100	78.509	ENSCJAG00000047222	-	100	78.509	Callithrix_jacchus
ENSIPUG00000021370	tsn	100	78.070	ENSCJAG00000044533	-	100	78.070	Callithrix_jacchus
ENSIPUG00000021370	tsn	99	79.464	ENSCAFG00000004700	TSN	93	79.464	Canis_familiaris
ENSIPUG00000021370	tsn	99	79.464	ENSCAFG00020011747	TSN	98	79.464	Canis_lupus_dingo
ENSIPUG00000021370	tsn	99	79.464	ENSCHIG00000010715	TSN	98	79.464	Capra_hircus
ENSIPUG00000021370	tsn	99	79.018	ENSTSYG00000004395	TSN	98	79.018	Carlito_syrichta
ENSIPUG00000021370	tsn	96	61.086	ENSCAPG00000015595	TSN	88	61.086	Cavia_aperea
ENSIPUG00000021370	tsn	99	79.018	ENSCPOG00000035645	TSN	98	79.018	Cavia_porcellus
ENSIPUG00000021370	tsn	100	78.070	ENSCCAG00000026371	TSN	100	78.070	Cebus_capucinus
ENSIPUG00000021370	tsn	67	66.447	ENSCCAG00000034886	-	84	66.447	Cebus_capucinus
ENSIPUG00000021370	tsn	99	79.018	ENSCATG00000032155	TSN	98	79.018	Cercocebus_atys
ENSIPUG00000021370	tsn	99	79.018	ENSCLAG00000006171	TSN	98	79.018	Chinchilla_lanigera
ENSIPUG00000021370	tsn	99	79.018	ENSCSAG00000016712	TSN	98	79.018	Chlorocebus_sabaeus
ENSIPUG00000021370	tsn	97	69.545	ENSCPBG00000018116	-	96	69.545	Chrysemys_picta_bellii
ENSIPUG00000021370	tsn	67	77.483	ENSCPBG00000013741	-	80	77.483	Chrysemys_picta_bellii
ENSIPUG00000021370	tsn	96	48.624	ENSCING00000012612	-	100	48.624	Ciona_intestinalis
ENSIPUG00000021370	tsn	98	45.740	ENSCSAVG00000009485	-	99	45.740	Ciona_savignyi
ENSIPUG00000021370	tsn	99	79.018	ENSCANG00000041881	TSN	98	79.018	Colobus_angolensis_palliatus
ENSIPUG00000021370	tsn	100	78.509	ENSCGRG00001018233	Tsn	100	78.509	Cricetulus_griseus_chok1gshd
ENSIPUG00000021370	tsn	100	78.509	ENSCGRG00000008331	Tsn	100	78.509	Cricetulus_griseus_crigri
ENSIPUG00000021370	tsn	100	85.903	ENSCSEG00000005825	tsn	100	85.903	Cynoglossus_semilaevis
ENSIPUG00000021370	tsn	99	78.855	ENSCVAG00000022024	tsn	100	79.736	Cyprinodon_variegatus
ENSIPUG00000021370	tsn	100	91.189	ENSDARG00000041830	tsn	100	91.189	Danio_rerio
ENSIPUG00000021370	tsn	99	79.464	ENSDNOG00000025740	TSN	98	79.464	Dasypus_novemcinctus
ENSIPUG00000021370	tsn	99	79.018	ENSDORG00000026251	-	98	79.018	Dipodomys_ordii
ENSIPUG00000021370	tsn	96	52.752	FBgn0033528	trsn	92	52.752	Drosophila_melanogaster
ENSIPUG00000021370	tsn	99	79.464	ENSEASG00005004774	TSN	98	79.464	Equus_asinus_asinus
ENSIPUG00000021370	tsn	99	79.464	ENSECAG00000015930	TSN	98	79.464	Equus_caballus
ENSIPUG00000021370	tsn	75	81.176	ENSEEUG00000013935	TSN	98	81.176	Erinaceus_europaeus
ENSIPUG00000021370	tsn	100	90.749	ENSELUG00000007669	tsn	100	90.749	Esox_lucius
ENSIPUG00000021370	tsn	71	60.494	ENSFCAG00000022306	-	92	60.494	Felis_catus
ENSIPUG00000021370	tsn	99	79.464	ENSFCAG00000027149	TSN	98	79.464	Felis_catus
ENSIPUG00000021370	tsn	91	79.426	ENSFALG00000013247	TSN	96	76.923	Ficedula_albicollis
ENSIPUG00000021370	tsn	99	79.018	ENSFDAG00000012302	TSN	98	79.018	Fukomys_damarensis
ENSIPUG00000021370	tsn	100	89.427	ENSFHEG00000015531	tsn	100	89.427	Fundulus_heteroclitus
ENSIPUG00000021370	tsn	99	83.186	ENSGMOG00000009247	tsn	100	83.186	Gadus_morhua
ENSIPUG00000021370	tsn	100	79.039	ENSGALG00000011652	TSN	100	79.039	Gallus_gallus
ENSIPUG00000021370	tsn	100	88.546	ENSGAFG00000003816	tsn	100	88.546	Gambusia_affinis
ENSIPUG00000021370	tsn	100	88.546	ENSGACG00000000235	tsn	98	88.546	Gasterosteus_aculeatus
ENSIPUG00000021370	tsn	99	79.018	ENSGGOG00000002216	TSN	98	79.018	Gorilla_gorilla
ENSIPUG00000021370	tsn	100	91.189	ENSHBUG00000002340	tsn	85	91.189	Haplochromis_burtoni
ENSIPUG00000021370	tsn	99	79.018	ENSHGLG00000007038	TSN	98	79.018	Heterocephalus_glaber_female
ENSIPUG00000021370	tsn	99	79.018	ENSHGLG00100000069	TSN	98	79.018	Heterocephalus_glaber_male
ENSIPUG00000021370	tsn	98	86.996	ENSHCOG00000001756	tsn	99	86.996	Hippocampus_comes
ENSIPUG00000021370	tsn	99	79.018	ENSSTOG00000000972	TSN	98	79.018	Ictidomys_tridecemlineatus
ENSIPUG00000021370	tsn	99	78.571	ENSJJAG00000006730	Tsn	98	78.571	Jaculus_jaculus
ENSIPUG00000021370	tsn	100	90.749	ENSKMAG00000004996	tsn	100	90.749	Kryptolebias_marmoratus
ENSIPUG00000021370	tsn	100	89.868	ENSLBEG00000012620	tsn	100	89.868	Labrus_bergylta
ENSIPUG00000021370	tsn	100	62.609	ENSLACG00000005246	TSN	100	62.609	Latimeria_chalumnae
ENSIPUG00000021370	tsn	100	87.336	ENSLOCG00000002191	tsn	99	87.336	Lepisosteus_oculatus
ENSIPUG00000021370	tsn	99	74.554	ENSLAFG00000032428	TSN	98	74.554	Loxodonta_africana
ENSIPUG00000021370	tsn	99	79.018	ENSMFAG00000044217	TSN	98	79.018	Macaca_fascicularis
ENSIPUG00000021370	tsn	99	79.018	ENSMMUG00000021119	TSN	98	79.018	Macaca_mulatta
ENSIPUG00000021370	tsn	99	79.018	ENSMNEG00000040632	TSN	98	79.018	Macaca_nemestrina
ENSIPUG00000021370	tsn	55	75.806	ENSMLEG00000038656	TSN	96	75.806	Mandrillus_leucophaeus
ENSIPUG00000021370	tsn	100	90.308	ENSMAMG00000019536	tsn	100	90.308	Mastacembelus_armatus
ENSIPUG00000021370	tsn	100	91.189	ENSMZEG00005018715	tsn	85	91.189	Maylandia_zebra
ENSIPUG00000021370	tsn	77	79.661	ENSMGAG00000011956	TSN	90	79.661	Meleagris_gallopavo
ENSIPUG00000021370	tsn	92	78.571	ENSMAUG00000018800	Tsn	100	79.612	Mesocricetus_auratus
ENSIPUG00000021370	tsn	99	79.018	ENSMICG00000015793	TSN	98	79.018	Microcebus_murinus
ENSIPUG00000021370	tsn	100	78.947	ENSMOCG00000013248	Tsn	100	78.947	Microtus_ochrogaster
ENSIPUG00000021370	tsn	90	88.293	ENSMMOG00000019661	tsn	100	88.293	Mola_mola
ENSIPUG00000021370	tsn	97	78.733	ENSMODG00000000147	TSN	98	77.778	Monodelphis_domestica
ENSIPUG00000021370	tsn	100	91.189	ENSMALG00000001827	tsn	100	91.189	Monopterus_albus
ENSIPUG00000021370	tsn	100	78.509	ENSMUSG00000026374	Tsn	100	78.509	Mus_musculus
ENSIPUG00000021370	tsn	100	78.509	MGP_PahariEiJ_G0027742	Tsn	100	78.509	Mus_pahari
ENSIPUG00000021370	tsn	100	78.509	MGP_SPRETEiJ_G0015313	Tsn	100	78.509	Mus_spretus
ENSIPUG00000021370	tsn	99	79.464	ENSMPUG00000001056	TSN	98	79.464	Mustela_putorius_furo
ENSIPUG00000021370	tsn	89	80.693	ENSMLUG00000012656	TSN	98	80.693	Myotis_lucifugus
ENSIPUG00000021370	tsn	100	78.509	ENSNGAG00000010353	Tsn	100	78.509	Nannospalax_galili
ENSIPUG00000021370	tsn	100	91.630	ENSNBRG00000001193	tsn	100	91.630	Neolamprologus_brichardi
ENSIPUG00000021370	tsn	99	79.018	ENSNLEG00000032773	TSN	98	79.018	Nomascus_leucogenys
ENSIPUG00000021370	tsn	99	58.929	ENSMEUG00000006228	TSN	98	58.929	Notamacropus_eugenii
ENSIPUG00000021370	tsn	62	66.667	ENSOPRG00000004858	-	100	66.667	Ochotona_princeps
ENSIPUG00000021370	tsn	99	62.054	ENSODEG00000005998	-	98	62.054	Octodon_degus
ENSIPUG00000021370	tsn	99	79.018	ENSODEG00000008386	-	98	79.018	Octodon_degus
ENSIPUG00000021370	tsn	100	91.630	ENSONIG00000017060	tsn	100	91.630	Oreochromis_niloticus
ENSIPUG00000021370	tsn	88	82.412	ENSOANG00000003457	TSN	98	81.281	Ornithorhynchus_anatinus
ENSIPUG00000021370	tsn	99	78.667	ENSOCUG00000023529	TSN	99	78.667	Oryctolagus_cuniculus
ENSIPUG00000021370	tsn	100	90.749	ENSORLG00000010049	tsn	100	90.749	Oryzias_latipes
ENSIPUG00000021370	tsn	100	90.308	ENSORLG00020016476	tsn	100	90.308	Oryzias_latipes_hni
ENSIPUG00000021370	tsn	63	88.194	ENSORLG00020017000	-	84	88.194	Oryzias_latipes_hni
ENSIPUG00000021370	tsn	100	90.749	ENSORLG00015019192	tsn	100	90.749	Oryzias_latipes_hsok
ENSIPUG00000021370	tsn	100	90.749	ENSOMEG00000016335	tsn	100	90.749	Oryzias_melastigma
ENSIPUG00000021370	tsn	99	79.018	ENSOGAG00000030436	TSN	98	79.018	Otolemur_garnettii
ENSIPUG00000021370	tsn	99	79.464	ENSOARG00000013339	TSN	98	79.464	Ovis_aries
ENSIPUG00000021370	tsn	99	79.018	ENSPPAG00000032878	TSN	98	79.018	Pan_paniscus
ENSIPUG00000021370	tsn	93	53.774	ENSPPRG00000004174	-	90	53.774	Panthera_pardus
ENSIPUG00000021370	tsn	99	79.464	ENSPPRG00000006531	TSN	98	79.464	Panthera_pardus
ENSIPUG00000021370	tsn	56	73.810	ENSPTIG00000012953	TSN	88	71.756	Panthera_tigris_altaica
ENSIPUG00000021370	tsn	99	79.018	ENSPTRG00000012420	TSN	98	79.018	Pan_troglodytes
ENSIPUG00000021370	tsn	99	79.018	ENSPANG00000000733	TSN	98	79.018	Papio_anubis
ENSIPUG00000021370	tsn	100	90.308	ENSPKIG00000002005	tsn	100	90.308	Paramormyrops_kingsleyae
ENSIPUG00000021370	tsn	77	81.714	ENSPSIG00000006064	TSN	96	81.714	Pelodiscus_sinensis
ENSIPUG00000021370	tsn	100	88.987	ENSPMGG00000015287	tsn	100	88.987	Periophthalmus_magnuspinnatus
ENSIPUG00000021370	tsn	100	66.520	ENSPMAG00000009161	tsn	98	66.520	Petromyzon_marinus
ENSIPUG00000021370	tsn	89	81.281	ENSPCIG00000023491	TSN	98	81.188	Phascolarctos_cinereus
ENSIPUG00000021370	tsn	100	89.427	ENSPFOG00000016063	tsn	100	89.427	Poecilia_formosa
ENSIPUG00000021370	tsn	100	89.427	ENSPLAG00000010654	tsn	100	89.427	Poecilia_latipinna
ENSIPUG00000021370	tsn	100	89.868	ENSPMEG00000023570	tsn	100	89.868	Poecilia_mexicana
ENSIPUG00000021370	tsn	100	89.427	ENSPREG00000003481	tsn	100	89.427	Poecilia_reticulata
ENSIPUG00000021370	tsn	99	79.018	ENSPPYG00000012774	TSN	98	79.018	Pongo_abelii
ENSIPUG00000021370	tsn	75	80.588	ENSPCAG00000003549	TSN	98	80.588	Procavia_capensis
ENSIPUG00000021370	tsn	99	79.018	ENSPCOG00000011045	TSN	98	79.018	Propithecus_coquereli
ENSIPUG00000021370	tsn	99	79.464	ENSPVAG00000016702	TSN	98	79.464	Pteropus_vampyrus
ENSIPUG00000021370	tsn	100	91.189	ENSPNYG00000012396	tsn	85	91.189	Pundamilia_nyererei
ENSIPUG00000021370	tsn	100	94.714	ENSPNAG00000018140	tsn	100	94.714	Pygocentrus_nattereri
ENSIPUG00000021370	tsn	100	78.509	ENSRNOG00000002319	Tsn	100	78.509	Rattus_norvegicus
ENSIPUG00000021370	tsn	99	79.018	ENSRBIG00000041316	TSN	98	79.018	Rhinopithecus_bieti
ENSIPUG00000021370	tsn	99	79.018	ENSRROG00000029954	TSN	98	79.018	Rhinopithecus_roxellana
ENSIPUG00000021370	tsn	100	78.509	ENSSBOG00000028579	TSN	100	78.509	Saimiri_boliviensis_boliviensis
ENSIPUG00000021370	tsn	84	62.632	ENSSBOG00000015719	-	94	62.632	Saimiri_boliviensis_boliviensis
ENSIPUG00000021370	tsn	99	79.464	ENSSHAG00000011707	TSN	98	79.464	Sarcophilus_harrisii
ENSIPUG00000021370	tsn	100	88.546	ENSSFOG00015020668	tsn	100	88.546	Scleropages_formosus
ENSIPUG00000021370	tsn	100	86.344	ENSSMAG00000005822	tsn	100	86.344	Scophthalmus_maximus
ENSIPUG00000021370	tsn	100	91.189	ENSSDUG00000011388	tsn	100	91.189	Seriola_dumerili
ENSIPUG00000021370	tsn	100	91.189	ENSSLDG00000008206	tsn	100	91.189	Seriola_lalandi_dorsalis
ENSIPUG00000021370	tsn	100	52.193	ENSSARG00000007193	-	100	52.193	Sorex_araneus
ENSIPUG00000021370	tsn	100	79.386	ENSSPUG00000017518	TSN	100	79.386	Sphenodon_punctatus
ENSIPUG00000021370	tsn	100	90.749	ENSSPAG00000009283	tsn	100	90.749	Stegastes_partitus
ENSIPUG00000021370	tsn	99	79.464	ENSSSCG00000015729	TSN	98	80.693	Sus_scrofa
ENSIPUG00000021370	tsn	99	79.018	ENSTGUG00000004445	TSN	98	79.018	Taeniopygia_guttata
ENSIPUG00000021370	tsn	98	86.547	ENSTRUG00000013691	tsn	99	86.547	Takifugu_rubripes
ENSIPUG00000021370	tsn	100	88.106	ENSTNIG00000015707	tsn	100	88.106	Tetraodon_nigroviridis
ENSIPUG00000021370	tsn	99	79.018	ENSTBEG00000015319	TSN	98	79.018	Tupaia_belangeri
ENSIPUG00000021370	tsn	99	79.464	ENSTTRG00000005854	TSN	98	79.464	Tursiops_truncatus
ENSIPUG00000021370	tsn	99	79.464	ENSUAMG00000021618	TSN	98	79.464	Ursus_americanus
ENSIPUG00000021370	tsn	99	78.125	ENSUMAG00000008516	TSN	98	78.125	Ursus_maritimus
ENSIPUG00000021370	tsn	57	61.240	ENSVPAG00000009874	-	100	61.240	Vicugna_pacos
ENSIPUG00000021370	tsn	89	80.693	ENSVVUG00000027555	TSN	97	80.693	Vulpes_vulpes
ENSIPUG00000021370	tsn	98	73.991	ENSXETG00000000838	tsn	98	73.991	Xenopus_tropicalis
ENSIPUG00000021370	tsn	55	86.290	ENSXCOG00000018514	tsn	95	86.290	Xiphophorus_couchianus
ENSIPUG00000021370	tsn	100	88.987	ENSXMAG00000022538	tsn	100	88.987	Xiphophorus_maculatus