EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000021407 (Gene tree)
Gene ID: 108272840
Gene Symbol: -
Alias: -
Full Name: zinc finger protein Gfi-1b-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 7379 bases
Position: chr12:24802170-24809548
Accession: 108272840
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000031843	zf-C2H2	PF00096.26	4.5e-22	1	3
ENSIPUP00000031843	zf-C2H2	PF00096.26	4.5e-22	2	3
ENSIPUP00000031843	zf-C2H2	PF00096.26	4.5e-22	3	3
ENSIPUP00000031843	zf-met	PF12874.7	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000033109	-	1425	XM_017481637	ENSIPUP00000031843	316 (aa)	XP_017337126	A0A2D0S3W5

Gene Model

Click here to download ENSIPUG00000021407's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000021407's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000021407	-	65	42.857	ENSIPUG00000013315	-	97	40.909
ENSIPUG00000021407	-	59	40.000	ENSIPUG00000003011	-	56	40.000
ENSIPUG00000021407	-	59	41.379	ENSIPUG00000023761	-	56	40.244
ENSIPUG00000021407	-	59	41.905	ENSIPUG00000021527	-	92	41.905
ENSIPUG00000021407	-	62	44.545	ENSIPUG00000022751	-	96	46.364
ENSIPUG00000021407	-	52	42.453	ENSIPUG00000011073	-	97	42.453
ENSIPUG00000021407	-	54	46.364	ENSIPUG00000015177	-	69	46.364
ENSIPUG00000021407	-	57	40.000	ENSIPUG00000003040	zbtb47a	77	40.000
ENSIPUG00000021407	-	61	43.636	ENSIPUG00000016075	-	93	43.636
ENSIPUG00000021407	-	57	44.578	ENSIPUG00000015233	-	59	44.578
ENSIPUG00000021407	-	57	36.095	ENSIPUG00000021518	-	79	44.872
ENSIPUG00000021407	-	57	43.210	ENSIPUG00000021441	-	94	43.210
ENSIPUG00000021407	-	52	45.714	ENSIPUG00000021556	-	83	45.714
ENSIPUG00000021407	-	66	47.273	ENSIPUG00000015468	-	88	47.273
ENSIPUG00000021407	-	52	40.000	ENSIPUG00000006936	-	91	36.943
ENSIPUG00000021407	-	52	37.121	ENSIPUG00000016009	znf596	60	37.121
ENSIPUG00000021407	-	58	41.860	ENSIPUG00000011258	-	77	41.860
ENSIPUG00000021407	-	58	42.991	ENSIPUG00000022266	ZNF135	59	45.714
ENSIPUG00000021407	-	58	37.500	ENSIPUG00000011652	znf648	74	42.169
ENSIPUG00000021407	-	56	40.000	ENSIPUG00000013065	-	94	40.000
ENSIPUG00000021407	-	58	42.105	ENSIPUG00000012960	-	98	42.105
ENSIPUG00000021407	-	72	46.739	ENSIPUG00000023635	-	99	46.739
ENSIPUG00000021407	-	57	40.000	ENSIPUG00000021472	-	67	40.000
ENSIPUG00000021407	-	58	40.187	ENSIPUG00000007076	-	90	39.815
ENSIPUG00000021407	-	58	38.182	ENSIPUG00000001941	-	82	38.182
ENSIPUG00000021407	-	73	42.857	ENSIPUG00000006916	-	91	42.857
ENSIPUG00000021407	-	58	43.529	ENSIPUG00000022741	-	79	43.529
ENSIPUG00000021407	-	61	45.455	ENSIPUG00000015400	-	90	45.455
ENSIPUG00000021407	-	99	37.931	ENSIPUG00000005547	-	56	37.931
ENSIPUG00000021407	-	59	38.182	ENSIPUG00000008581	znf319b	83	38.182
ENSIPUG00000021407	-	96	41.716	ENSIPUG00000012769	gfi1b	50	63.415
ENSIPUG00000021407	-	61	43.396	ENSIPUG00000023688	-	94	42.991
ENSIPUG00000021407	-	52	43.243	ENSIPUG00000017575	-	59	43.243
ENSIPUG00000021407	-	57	35.366	ENSIPUG00000011967	zbtb41	51	33.523
ENSIPUG00000021407	-	84	43.182	ENSIPUG00000020760	-	60	43.182
ENSIPUG00000021407	-	53	40.909	ENSIPUG00000021515	-	85	40.909
ENSIPUG00000021407	-	57	40.909	ENSIPUG00000015121	-	56	40.909
ENSIPUG00000021407	-	57	36.000	ENSIPUG00000019205	-	50	36.000
ENSIPUG00000021407	-	85	43.750	ENSIPUG00000004905	znf236	59	43.750
ENSIPUG00000021407	-	62	44.318	ENSIPUG00000009750	-	79	44.318
ENSIPUG00000021407	-	60	42.478	ENSIPUG00000001248	prdm5	71	42.478
ENSIPUG00000021407	-	53	44.086	ENSIPUG00000021434	-	94	44.086
ENSIPUG00000021407	-	52	46.250	ENSIPUG00000021484	-	97	46.250
ENSIPUG00000021407	-	52	42.045	ENSIPUG00000005581	-	71	42.045

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000021407	-	52	65.455	ENSAMEG00000013858	-	85	65.455	Ailuropoda_melanoleuca
ENSIPUG00000021407	-	56	63.636	ENSACIG00000002180	-	96	63.636	Amphilophus_citrinellus
ENSIPUG00000021407	-	96	64.706	ENSACIG00000016354	gfi1ab	99	64.706	Amphilophus_citrinellus
ENSIPUG00000021407	-	68	52.838	ENSAPLG00000015700	GFI1	63	52.838	Anas_platyrhynchos
ENSIPUG00000021407	-	99	68.111	ENSAMXG00000015228	-	100	68.111	Astyanax_mexicanus
ENSIPUG00000021407	-	95	44.025	ENSAMXG00000006669	GFI1	56	59.777	Astyanax_mexicanus
ENSIPUG00000021407	-	52	83.486	ENSCAPG00000016268	-	96	83.486	Cavia_aperea
ENSIPUG00000021407	-	66	53.704	ENSCCAG00000036072	GFI1	54	50.628	Cebus_capucinus
ENSIPUG00000021407	-	75	50.800	ENSCLAG00000005915	GFI1	52	50.800	Chinchilla_lanigera
ENSIPUG00000021407	-	52	81.982	ENSCPBG00000015742	-	82	81.982	Chrysemys_picta_bellii
ENSIPUG00000021407	-	52	57.576	ENSCING00000011342	-	87	57.576	Ciona_intestinalis
ENSIPUG00000021407	-	52	58.125	ENSCSAVG00000005904	-	97	58.125	Ciona_savignyi
ENSIPUG00000021407	-	52	81.982	ENSCGRG00000013485	-	82	81.982	Cricetulus_griseus_crigri
ENSIPUG00000021407	-	52	81.982	ENSDORG00000023443	-	82	81.982	Dipodomys_ordii
ENSIPUG00000021407	-	96	46.926	ENSEBUG00000008075	gfi1ab	98	46.926	Eptatretus_burgeri
ENSIPUG00000021407	-	52	63.743	ENSEASG00005015509	GFI1	52	47.909	Equus_asinus_asinus
ENSIPUG00000021407	-	52	51.634	ENSECAG00000006647	GFI1	56	38.934	Equus_caballus
ENSIPUG00000021407	-	55	67.241	ENSELUG00000006948	-	51	67.836	Esox_lucius
ENSIPUG00000021407	-	52	64.118	ENSFCAG00000005914	GFI1	54	50.612	Felis_catus
ENSIPUG00000021407	-	52	81.982	ENSFDAG00000019296	-	82	81.982	Fukomys_damarensis
ENSIPUG00000021407	-	52	64.848	ENSGMOG00000007737	gfi1ab	100	64.848	Gadus_morhua
ENSIPUG00000021407	-	66	53.810	ENSGAFG00000018063	GFI1	51	53.023	Gambusia_affinis
ENSIPUG00000021407	-	96	51.792	ENSGAFG00000014303	-	89	51.466	Gambusia_affinis
ENSIPUG00000021407	-	52	81.982	ENSGAGG00000015899	GFI1	82	81.982	Gopherus_agassizii
ENSIPUG00000021407	-	95	43.653	ENSHCOG00000019555	GFI1	52	64.848	Hippocampus_comes
ENSIPUG00000021407	-	52	83.486	ENSJJAG00000022622	-	96	83.486	Jaculus_jaculus
ENSIPUG00000021407	-	96	47.576	ENSLACG00000017590	-	99	46.988	Latimeria_chalumnae
ENSIPUG00000021407	-	76	48.837	ENSLOCG00000004711	gfi1ab	62	48.837	Lepisosteus_oculatus
ENSIPUG00000021407	-	52	81.982	ENSMMUG00000005068	GFI1	82	81.982	Macaca_mulatta
ENSIPUG00000021407	-	68	52.838	ENSMGAG00000008187	GFI1	63	52.838	Meleagris_gallopavo
ENSIPUG00000021407	-	52	81.982	ENSMAUG00000021273	-	82	81.982	Mesocricetus_auratus
ENSIPUG00000021407	-	52	81.982	ENSMOCG00000004478	-	82	81.982	Microtus_ochrogaster
ENSIPUG00000021407	-	52	63.743	ENSMODG00000011802	GFI1	55	50.000	Monodelphis_domestica
ENSIPUG00000021407	-	52	65.455	ENSMALG00000014672	gfi1ab	100	65.455	Monopterus_albus
ENSIPUG00000021407	-	52	81.982	MGP_CAROLIEiJ_G0027508	Gfi1	82	81.982	Mus_caroli
ENSIPUG00000021407	-	52	81.982	MGP_PahariEiJ_G0017280	Gfi1	82	81.982	Mus_pahari
ENSIPUG00000021407	-	52	81.982	ENSNGAG00000002549	-	82	81.982	Nannospalax_galili
ENSIPUG00000021407	-	52	81.982	ENSODEG00000006410	-	82	81.982	Octodon_degus
ENSIPUG00000021407	-	96	64.706	ENSONIG00000019246	gfi1ab	99	66.061	Oreochromis_niloticus
ENSIPUG00000021407	-	95	43.284	ENSORLG00020002817	GFI1	50	63.529	Oryzias_latipes_hni
ENSIPUG00000021407	-	52	64.118	ENSPPRG00000007521	GFI1	54	50.612	Panthera_pardus
ENSIPUG00000021407	-	52	79.167	ENSPTIG00000002680	-	87	79.167	Panthera_tigris_altaica
ENSIPUG00000021407	-	76	51.822	ENSPMGG00000012546	gfi1ab	61	51.822	Periophthalmus_magnuspinnatus
ENSIPUG00000021407	-	52	64.242	ENSPMGG00000011041	GFI1	52	64.242	Periophthalmus_magnuspinnatus
ENSIPUG00000021407	-	96	64.706	ENSPFOG00000023214	gfi1ab	99	64.706	Poecilia_formosa
ENSIPUG00000021407	-	96	44.411	ENSPFOG00000024581	-	51	64.072	Poecilia_formosa
ENSIPUG00000021407	-	96	64.706	ENSPLAG00000010879	gfi1ab	99	64.706	Poecilia_latipinna
ENSIPUG00000021407	-	66	53.023	ENSPMEG00000019299	GFI1	55	53.023	Poecilia_mexicana
ENSIPUG00000021407	-	96	64.706	ENSPMEG00000013694	gfi1ab	99	64.706	Poecilia_mexicana
ENSIPUG00000021407	-	96	64.706	ENSPNYG00000021183	gfi1ab	99	66.061	Pundamilia_nyererei
ENSIPUG00000021407	-	99	68.239	ENSPNAG00000014299	-	100	68.239	Pygocentrus_nattereri
ENSIPUG00000021407	-	56	60.000	ENSPNAG00000028014	GFI1	100	60.000	Pygocentrus_nattereri
ENSIPUG00000021407	-	96	50.158	ENSSFOG00015008114	-	97	50.943	Scleropages_formosus
ENSIPUG00000021407	-	52	64.706	ENSSMAG00000002782	gfi1ab	99	64.706	Scophthalmus_maximus
ENSIPUG00000021407	-	96	48.428	ENSSMAG00000002798	-	98	47.484	Scophthalmus_maximus
ENSIPUG00000021407	-	52	65.455	ENSSDUG00000022410	gfi1ab	99	65.455	Seriola_dumerili
ENSIPUG00000021407	-	52	75.207	ENSSLDG00000020163	gfi1ab	99	65.455	Seriola_lalandi_dorsalis
ENSIPUG00000021407	-	96	44.720	ENSSPAG00000009140	gfi1ab	53	66.061	Stegastes_partitus
ENSIPUG00000021407	-	96	66.061	ENSTRUG00000000415	gfi1ab	99	64.706	Takifugu_rubripes
ENSIPUG00000021407	-	52	64.706	ENSTNIG00000000651	gfi1ab	50	64.706	Tetraodon_nigroviridis
ENSIPUG00000021407	-	52	81.982	ENSUMAG00000011251	-	82	81.982	Ursus_maritimus
ENSIPUG00000021407	-	52	81.308	ENSXCOG00000009186	-	86	81.308	Xiphophorus_couchianus
ENSIPUG00000021407	-	96	45.289	ENSXMAG00000006527	-	51	63.855	Xiphophorus_maculatus
ENSIPUG00000021407	-	96	64.706	ENSXMAG00000010523	gfi1ab	99	64.706	Xiphophorus_maculatus