EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000021433 (Gene tree)
Gene ID: 108276736
Gene Symbol: rc3h2
Alias: si:ch211-243g18.1
Full Name: roquin-2-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 21947 bases
Position: chr16:1156565-1178511
Accession: 108276736
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000031905	zf-CCCH	PF00642.24	3.7e-07	1	1
ENSIPUP00000031912	zf-CCCH	PF00642.24	3.7e-07	1	1
ENSIPUP00000031885	zf-CCCH	PF00642.24	3.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000033151	-	3684	XM_017488616	ENSIPUP00000031885	1034 (aa)	XP_017344105	A0A2D0SN26
ENSIPUT00000033178	-	4021	-	ENSIPUP00000031912	989 (aa)	-	-
ENSIPUT00000033171	-	4006	-	ENSIPUP00000031905	989 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000021433's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000021433's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000021433	rc3h2	90	57.069	ENSG00000056586	RC3H2	95	83.407	Homo_sapiens
ENSIPUG00000021433	rc3h2	60	69.470	ENSAPOG00000002117	rc3h2	100	59.157	Acanthochromis_polyacanthus
ENSIPUG00000021433	rc3h2	90	57.010	ENSAMEG00000006498	RC3H2	81	56.205	Ailuropoda_melanoleuca
ENSIPUG00000021433	rc3h2	60	68.966	ENSAPEG00000007757	rc3h2	100	57.436	Amphiprion_percula
ENSIPUG00000021433	rc3h2	100	59.243	ENSATEG00000019414	rc3h2	100	58.935	Anabas_testudineus
ENSIPUG00000021433	rc3h2	89	57.752	ENSAPLG00000013920	RC3H2	91	53.591	Anas_platyrhynchos
ENSIPUG00000021433	rc3h2	90	56.966	ENSANAG00000030862	RC3H2	95	83.407	Aotus_nancymaae
ENSIPUG00000021433	rc3h2	100	58.824	ENSACLG00000023136	rc3h2	100	58.134	Astatotilapia_calliptera
ENSIPUG00000021433	rc3h2	100	76.068	ENSAMXG00000006778	rc3h2	100	75.570	Astyanax_mexicanus
ENSIPUG00000021433	rc3h2	90	57.128	ENSBTAG00000023867	RC3H2	81	56.205	Bos_taurus
ENSIPUG00000021433	rc3h2	90	56.966	ENSCJAG00000020050	RC3H2	95	83.407	Callithrix_jacchus
ENSIPUG00000021433	rc3h2	90	56.907	ENSCAFG00020015288	RC3H2	95	83.407	Canis_lupus_dingo
ENSIPUG00000021433	rc3h2	90	57.010	ENSCHIG00000019319	RC3H2	84	55.906	Capra_hircus
ENSIPUG00000021433	rc3h2	87	48.960	ENSCAPG00000017086	RC3H2	77	70.534	Cavia_aperea
ENSIPUG00000021433	rc3h2	90	57.379	ENSCPOG00000008511	RC3H2	81	56.879	Cavia_porcellus
ENSIPUG00000021433	rc3h2	90	57.069	ENSCCAG00000001404	RC3H2	95	83.407	Cebus_capucinus
ENSIPUG00000021433	rc3h2	90	56.966	ENSCATG00000036655	RC3H2	95	83.407	Cercocebus_atys
ENSIPUG00000021433	rc3h2	90	57.276	ENSCLAG00000013261	RC3H2	81	56.571	Chinchilla_lanigera
ENSIPUG00000021433	rc3h2	91	58.799	ENSCPBG00000009811	RC3H2	81	58.653	Chrysemys_picta_bellii
ENSIPUG00000021433	rc3h2	90	56.966	ENSCANG00000043140	RC3H2	95	83.407	Colobus_angolensis_palliatus
ENSIPUG00000021433	rc3h2	90	57.113	ENSCGRG00001010006	Rc3h2	81	55.521	Cricetulus_griseus_chok1gshd
ENSIPUG00000021433	rc3h2	76	59.489	ENSCGRG00000009255	Rc3h2	77	57.590	Cricetulus_griseus_crigri
ENSIPUG00000021433	rc3h2	100	57.423	ENSCSEG00000017460	rc3h2	100	57.534	Cynoglossus_semilaevis
ENSIPUG00000021433	rc3h2	100	60.000	ENSCVAG00000012202	rc3h2	100	59.627	Cyprinodon_variegatus
ENSIPUG00000021433	rc3h2	100	65.025	ENSDARG00000063050	rc3h2	100	64.398	Danio_rerio
ENSIPUG00000021433	rc3h2	90	57.320	ENSDNOG00000014557	RC3H2	81	56.718	Dasypus_novemcinctus
ENSIPUG00000021433	rc3h2	96	53.142	ENSDORG00000006398	Rc3h2	90	52.530	Dipodomys_ordii
ENSIPUG00000021433	rc3h2	96	53.131	ENSEASG00005020897	RC3H2	94	79.425	Equus_asinus_asinus
ENSIPUG00000021433	rc3h2	90	56.907	ENSECAG00000022176	RC3H2	81	56.308	Equus_caballus
ENSIPUG00000021433	rc3h2	100	63.074	ENSELUG00000006105	rc3h2	100	63.087	Esox_lucius
ENSIPUG00000021433	rc3h2	90	57.010	ENSFCAG00000007375	RC3H2	81	56.205	Felis_catus
ENSIPUG00000021433	rc3h2	90	58.144	ENSFALG00000002011	RC3H2	81	58.101	Ficedula_albicollis
ENSIPUG00000021433	rc3h2	90	56.863	ENSFDAG00000012477	RC3H2	81	56.366	Fukomys_damarensis
ENSIPUG00000021433	rc3h2	100	60.405	ENSFHEG00000012272	rc3h2	100	59.389	Fundulus_heteroclitus
ENSIPUG00000021433	rc3h2	69	56.510	ENSGMOG00000016709	-	99	55.890	Gadus_morhua
ENSIPUG00000021433	rc3h2	89	58.394	ENSGALG00000001253	RC3H2	91	53.591	Gallus_gallus
ENSIPUG00000021433	rc3h2	100	60.258	ENSGAFG00000007679	rc3h2	100	59.273	Gambusia_affinis
ENSIPUG00000021433	rc3h2	76	61.733	ENSGACG00000017369	rc3h2	100	86.199	Gasterosteus_aculeatus
ENSIPUG00000021433	rc3h2	89	58.516	ENSGAGG00000018295	RC3H2	88	58.111	Gopherus_agassizii
ENSIPUG00000021433	rc3h2	90	56.966	ENSGGOG00000017062	RC3H2	95	83.407	Gorilla_gorilla
ENSIPUG00000021433	rc3h2	100	59.530	ENSHBUG00000003976	rc3h2	100	58.773	Haplochromis_burtoni
ENSIPUG00000021433	rc3h2	90	56.804	ENSHGLG00100018015	RC3H2	81	56.103	Heterocephalus_glaber_male
ENSIPUG00000021433	rc3h2	100	58.384	ENSHCOG00000003006	rc3h2	100	58.639	Hippocampus_comes
ENSIPUG00000021433	rc3h2	90	56.760	ENSSTOG00000010655	RC3H2	81	56.263	Ictidomys_tridecemlineatus
ENSIPUG00000021433	rc3h2	90	56.863	ENSJJAG00000022376	Rc3h2	81	56.366	Jaculus_jaculus
ENSIPUG00000021433	rc3h2	100	60.110	ENSKMAG00000010936	rc3h2	100	59.929	Kryptolebias_marmoratus
ENSIPUG00000021433	rc3h2	100	54.918	ENSLOCG00000002894	rc3h2	53	71.570	Lepisosteus_oculatus
ENSIPUG00000021433	rc3h2	96	53.726	ENSLAFG00000003521	RC3H2	91	52.656	Loxodonta_africana
ENSIPUG00000021433	rc3h2	90	57.930	ENSMFAG00000035621	RC3H2	95	83.407	Macaca_fascicularis
ENSIPUG00000021433	rc3h2	90	56.966	ENSMMUG00000021134	RC3H2	95	83.407	Macaca_mulatta
ENSIPUG00000021433	rc3h2	90	56.966	ENSMNEG00000031599	RC3H2	95	81.195	Macaca_nemestrina
ENSIPUG00000021433	rc3h2	90	56.966	ENSMLEG00000033809	RC3H2	95	83.407	Mandrillus_leucophaeus
ENSIPUG00000021433	rc3h2	51	86.425	ENSMAMG00000009119	rc3h2	93	86.425	Mastacembelus_armatus
ENSIPUG00000021433	rc3h2	100	59.530	ENSMZEG00005017019	rc3h2	100	58.803	Maylandia_zebra
ENSIPUG00000021433	rc3h2	89	57.960	ENSMGAG00000007984	RC3H2	81	57.570	Meleagris_gallopavo
ENSIPUG00000021433	rc3h2	69	58.262	ENSMAUG00000003117	Rc3h2	67	58.262	Mesocricetus_auratus
ENSIPUG00000021433	rc3h2	90	56.863	ENSMICG00000003227	RC3H2	95	83.186	Microcebus_murinus
ENSIPUG00000021433	rc3h2	90	56.347	ENSMOCG00000009592	Rc3h2	81	55.738	Microtus_ochrogaster
ENSIPUG00000021433	rc3h2	96	63.843	ENSMMOG00000021305	rc3h2	99	62.346	Mola_mola
ENSIPUG00000021433	rc3h2	89	57.292	ENSMODG00000019725	RC3H2	76	53.125	Monodelphis_domestica
ENSIPUG00000021433	rc3h2	96	53.992	MGP_CAROLIEiJ_G0023516	Rc3h2	95	83.407	Mus_caroli
ENSIPUG00000021433	rc3h2	96	53.413	ENSMUSG00000075376	Rc3h2	95	83.407	Mus_musculus
ENSIPUG00000021433	rc3h2	96	53.562	MGP_PahariEiJ_G0024969	Rc3h2	95	83.407	Mus_pahari
ENSIPUG00000021433	rc3h2	96	53.321	MGP_SPRETEiJ_G0024436	Rc3h2	95	83.407	Mus_spretus
ENSIPUG00000021433	rc3h2	90	57.113	ENSMPUG00000014141	RC3H2	81	56.410	Mustela_putorius_furo
ENSIPUG00000021433	rc3h2	96	52.957	ENSMLUG00000013992	RC3H2	81	55.408	Myotis_lucifugus
ENSIPUG00000021433	rc3h2	100	59.530	ENSNBRG00000009276	rc3h2	100	58.890	Neolamprologus_brichardi
ENSIPUG00000021433	rc3h2	90	56.712	ENSNLEG00000017204	RC3H2	95	83.407	Nomascus_leucogenys
ENSIPUG00000021433	rc3h2	64	64.498	ENSOPRG00000000135	RC3H2	67	64.498	Ochotona_princeps
ENSIPUG00000021433	rc3h2	100	58.945	ENSONIG00000003945	rc3h2	100	58.333	Oreochromis_niloticus
ENSIPUG00000021433	rc3h2	96	53.364	ENSOANG00000008194	RC3H2	100	52.984	Ornithorhynchus_anatinus
ENSIPUG00000021433	rc3h2	89	56.889	ENSOCUG00000008804	RC3H2	90	52.622	Oryctolagus_cuniculus
ENSIPUG00000021433	rc3h2	100	57.966	ENSORLG00000010018	rc3h2	100	56.727	Oryzias_latipes
ENSIPUG00000021433	rc3h2	100	58.032	ENSORLG00020013257	rc3h2	100	56.775	Oryzias_latipes_hni
ENSIPUG00000021433	rc3h2	100	57.852	ENSORLG00015001525	rc3h2	100	56.604	Oryzias_latipes_hsok
ENSIPUG00000021433	rc3h2	100	57.800	ENSOMEG00000023540	rc3h2	100	56.641	Oryzias_melastigma
ENSIPUG00000021433	rc3h2	90	57.172	ENSOGAG00000010678	RC3H2	81	55.918	Otolemur_garnettii
ENSIPUG00000021433	rc3h2	90	57.010	ENSOARG00000013965	RC3H2	81	56.205	Ovis_aries
ENSIPUG00000021433	rc3h2	90	56.863	ENSPPAG00000036013	RC3H2	95	83.186	Pan_paniscus
ENSIPUG00000021433	rc3h2	91	56.704	ENSPPRG00000008698	RC3H2	91	55.906	Panthera_pardus
ENSIPUG00000021433	rc3h2	91	56.704	ENSPTIG00000014257	RC3H2	91	55.906	Panthera_tigris_altaica
ENSIPUG00000021433	rc3h2	90	56.863	ENSPTRG00000021339	RC3H2	95	83.186	Pan_troglodytes
ENSIPUG00000021433	rc3h2	90	55.315	ENSPANG00000025840	RC3H2	94	79.867	Papio_anubis
ENSIPUG00000021433	rc3h2	100	61.923	ENSPKIG00000021910	rc3h2	96	60.945	Paramormyrops_kingsleyae
ENSIPUG00000021433	rc3h2	96	53.690	ENSPSIG00000005393	RC3H2	91	53.647	Pelodiscus_sinensis
ENSIPUG00000021433	rc3h2	90	83.404	ENSPMGG00000023963	rc3h2	94	87.133	Periophthalmus_magnuspinnatus
ENSIPUG00000021433	rc3h2	90	56.863	ENSPEMG00000023441	Rc3h2	81	56.160	Peromyscus_maniculatus_bairdii
ENSIPUG00000021433	rc3h2	89	58.534	ENSPCIG00000025559	RC3H2	91	53.011	Phascolarctos_cinereus
ENSIPUG00000021433	rc3h2	96	61.845	ENSPFOG00000019699	rc3h2	98	61.750	Poecilia_formosa
ENSIPUG00000021433	rc3h2	96	61.841	ENSPLAG00000005799	rc3h2	97	61.427	Poecilia_latipinna
ENSIPUG00000021433	rc3h2	100	60.000	ENSPMEG00000014187	rc3h2	98	59.563	Poecilia_mexicana
ENSIPUG00000021433	rc3h2	100	60.426	ENSPREG00000008979	rc3h2	100	59.663	Poecilia_reticulata
ENSIPUG00000021433	rc3h2	74	71.542	ENSPCAG00000010154	RC3H2	67	71.542	Procavia_capensis
ENSIPUG00000021433	rc3h2	100	58.839	ENSPNYG00000012063	rc3h2	100	58.148	Pundamilia_nyererei
ENSIPUG00000021433	rc3h2	100	75.269	ENSPNAG00000017502	rc3h2	100	75.491	Pygocentrus_nattereri
ENSIPUG00000021433	rc3h2	96	53.006	ENSRNOG00000009196	Rc3h2	94	52.394	Rattus_norvegicus
ENSIPUG00000021433	rc3h2	91	56.455	ENSRBIG00000032579	RC3H2	95	83.407	Rhinopithecus_bieti
ENSIPUG00000021433	rc3h2	90	57.069	ENSRROG00000043784	RC3H2	95	83.407	Rhinopithecus_roxellana
ENSIPUG00000021433	rc3h2	91	56.504	ENSSBOG00000029100	RC3H2	95	82.895	Saimiri_boliviensis_boliviensis
ENSIPUG00000021433	rc3h2	96	53.775	ENSSHAG00000007498	RC3H2	90	53.486	Sarcophilus_harrisii
ENSIPUG00000021433	rc3h2	100	58.839	ENSSMAG00000020048	rc3h2	100	58.476	Scophthalmus_maximus
ENSIPUG00000021433	rc3h2	100	59.469	ENSSDUG00000016022	rc3h2	100	59.587	Seriola_dumerili
ENSIPUG00000021433	rc3h2	100	59.302	ENSSLDG00000016070	rc3h2	100	59.587	Seriola_lalandi_dorsalis
ENSIPUG00000021433	rc3h2	96	52.757	ENSSARG00000012329	RC3H2	91	52.242	Sorex_araneus
ENSIPUG00000021433	rc3h2	96	54.044	ENSSPUG00000001457	RC3H2	91	53.910	Sphenodon_punctatus
ENSIPUG00000021433	rc3h2	100	60.322	ENSSPAG00000005233	rc3h2	100	57.797	Stegastes_partitus
ENSIPUG00000021433	rc3h2	90	56.952	ENSSSCG00000005575	RC3H2	93	83.186	Sus_scrofa
ENSIPUG00000021433	rc3h2	90	58.041	ENSTGUG00000006889	-	81	57.895	Taeniopygia_guttata
ENSIPUG00000021433	rc3h2	75	58.578	ENSTBEG00000009622	RC3H2	78	58.896	Tupaia_belangeri
ENSIPUG00000021433	rc3h2	83	62.701	ENSTTRG00000016954	RC3H2	74	61.886	Tursiops_truncatus
ENSIPUG00000021433	rc3h2	90	57.010	ENSUAMG00000015355	RC3H2	81	56.205	Ursus_americanus
ENSIPUG00000021433	rc3h2	90	57.010	ENSUMAG00000003161	RC3H2	95	83.407	Ursus_maritimus
ENSIPUG00000021433	rc3h2	90	57.113	ENSVPAG00000005994	RC3H2	81	56.308	Vicugna_pacos
ENSIPUG00000021433	rc3h2	90	56.907	ENSVVUG00000009519	RC3H2	84	56.103	Vulpes_vulpes
ENSIPUG00000021433	rc3h2	96	63.136	ENSXCOG00000005002	rc3h2	100	83.512	Xiphophorus_couchianus
ENSIPUG00000021433	rc3h2	100	60.534	ENSXMAG00000001724	rc3h2	100	58.747	Xiphophorus_maculatus