EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000021556 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 1972 bases
Position: chr11:1009546-1011517
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000032072	zf-C2H2	PF00096.26	4.9e-43	1	7
ENSIPUP00000032072	zf-C2H2	PF00096.26	4.9e-43	2	7
ENSIPUP00000032072	zf-C2H2	PF00096.26	4.9e-43	3	7
ENSIPUP00000032072	zf-C2H2	PF00096.26	4.9e-43	4	7
ENSIPUP00000032072	zf-C2H2	PF00096.26	4.9e-43	5	7
ENSIPUP00000032072	zf-C2H2	PF00096.26	4.9e-43	6	7
ENSIPUP00000032072	zf-C2H2	PF00096.26	4.9e-43	7	7
ENSIPUP00000032072	zf-met	PF12874.7	7.6e-11	1	3
ENSIPUP00000032072	zf-met	PF12874.7	7.6e-11	2	3
ENSIPUP00000032072	zf-met	PF12874.7	7.6e-11	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000033344	-	732	-	ENSIPUP00000032072	243 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000021556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000021556's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000021556	-	91	65.341	ENSIPUG00000023513	-	50	64.062
ENSIPUG00000021556	-	88	41.284	ENSIPUG00000019706	-	68	41.284
ENSIPUG00000021556	-	98	67.227	ENSIPUG00000005733	-	75	67.227
ENSIPUG00000021556	-	85	38.739	ENSIPUG00000024011	-	53	38.739
ENSIPUG00000021556	-	88	61.224	ENSIPUG00000003960	-	83	61.224
ENSIPUG00000021556	-	77	33.113	ENSIPUG00000015844	snai1b	56	33.113
ENSIPUG00000021556	-	97	61.780	ENSIPUG00000021441	-	98	62.814
ENSIPUG00000021556	-	88	44.500	ENSIPUG00000011652	znf648	74	44.845
ENSIPUG00000021556	-	99	60.804	ENSIPUG00000015233	-	72	60.804
ENSIPUG00000021556	-	98	62.189	ENSIPUG00000006936	-	98	62.371
ENSIPUG00000021556	-	88	56.923	ENSIPUG00000023761	-	60	56.923
ENSIPUG00000021556	-	99	60.976	ENSIPUG00000015601	-	60	60.976
ENSIPUG00000021556	-	98	61.506	ENSIPUG00000003011	-	55	61.506
ENSIPUG00000021556	-	82	37.313	ENSIPUG00000005547	-	50	37.313
ENSIPUG00000021556	-	95	63.317	ENSIPUG00000022751	-	98	61.929
ENSIPUG00000021556	-	99	65.873	ENSIPUG00000021472	-	85	65.873
ENSIPUG00000021556	-	92	37.705	ENSIPUG00000015037	znf711	51	34.906
ENSIPUG00000021556	-	99	66.497	ENSIPUG00000016075	-	97	66.497
ENSIPUG00000021556	-	93	56.542	ENSIPUG00000013315	-	99	56.542
ENSIPUG00000021556	-	98	56.410	ENSIPUG00000015203	-	64	56.410
ENSIPUG00000021556	-	88	61.017	ENSIPUG00000022741	-	79	61.017
ENSIPUG00000021556	-	98	64.948	ENSIPUG00000015177	-	66	64.948
ENSIPUG00000021556	-	93	65.517	ENSIPUG00000012960	-	92	65.517
ENSIPUG00000021556	-	97	47.208	ENSIPUG00000022266	ZNF135	65	47.208
ENSIPUG00000021556	-	81	37.594	ENSIPUG00000000131	snai2	50	37.594
ENSIPUG00000021556	-	87	37.671	ENSIPUG00000004551	scrt1a	51	37.671
ENSIPUG00000021556	-	87	41.315	ENSIPUG00000003040	zbtb47a	80	41.315
ENSIPUG00000021556	-	88	42.727	ENSIPUG00000024007	-	50	42.727
ENSIPUG00000021556	-	87	31.111	ENSIPUG00000024004	-	91	31.111
ENSIPUG00000021556	-	83	35.644	ENSIPUG00000018102	znf646	73	36.170
ENSIPUG00000021556	-	85	44.444	ENSIPUG00000001248	prdm5	74	43.590
ENSIPUG00000021556	-	99	62.814	ENSIPUG00000015121	-	70	65.829
ENSIPUG00000021556	-	88	45.729	ENSIPUG00000019205	-	74	45.729
ENSIPUG00000021556	-	88	63.725	ENSIPUG00000017575	-	55	63.265
ENSIPUG00000021556	-	95	46.512	ENSIPUG00000004905	znf236	57	46.512
ENSIPUG00000021556	-	98	53.435	ENSIPUG00000004428	-	88	53.435
ENSIPUG00000021556	-	88	63.333	ENSIPUG00000002655	-	98	63.333
ENSIPUG00000021556	-	99	71.357	ENSIPUG00000015400	-	96	71.186
ENSIPUG00000021556	-	89	32.642	ENSIPUG00000002075	znf341	50	32.642
ENSIPUG00000021556	-	82	41.709	ENSIPUG00000011399	zbtb47b	73	41.709
ENSIPUG00000021556	-	95	39.306	ENSIPUG00000008581	znf319b	92	39.306
ENSIPUG00000021556	-	83	45.714	ENSIPUG00000021407	-	52	45.714
ENSIPUG00000021556	-	93	39.713	ENSIPUG00000007076	-	91	39.713
ENSIPUG00000021556	-	88	39.888	ENSIPUG00000011258	-	88	40.341
ENSIPUG00000021556	-	88	60.914	ENSIPUG00000021527	-	96	62.437
ENSIPUG00000021556	-	90	62.238	ENSIPUG00000005581	-	78	62.238
ENSIPUG00000021556	-	84	64.130	ENSIPUG00000021484	-	97	64.130
ENSIPUG00000021556	-	82	44.954	ENSIPUG00000012830	-	78	44.954
ENSIPUG00000021556	-	98	63.402	ENSIPUG00000023688	-	99	63.402
ENSIPUG00000021556	-	90	64.324	ENSIPUG00000021434	-	93	64.324
ENSIPUG00000021556	-	98	68.657	ENSIPUG00000015468	-	92	68.657
ENSIPUG00000021556	-	87	39.252	ENSIPUG00000013526	-	81	39.252
ENSIPUG00000021556	-	93	65.116	ENSIPUG00000009750	-	87	65.116
ENSIPUG00000021556	-	99	69.655	ENSIPUG00000015294	-	65	61.084
ENSIPUG00000021556	-	84	47.692	ENSIPUG00000012109	ZN12	51	47.692
ENSIPUG00000021556	-	82	63.452	ENSIPUG00000021998	-	91	63.452
ENSIPUG00000021556	-	91	48.636	ENSIPUG00000016009	znf596	63	49.673
ENSIPUG00000021556	-	93	67.005	ENSIPUG00000023635	-	95	63.687
ENSIPUG00000021556	-	89	65.517	ENSIPUG00000013065	-	93	63.131
ENSIPUG00000021556	-	83	66.387	ENSIPUG00000005339	-	83	66.387
ENSIPUG00000021556	-	95	40.252	ENSIPUG00000005379	e4f1	52	40.252
ENSIPUG00000021556	-	87	64.398	ENSIPUG00000007934	-	94	64.398
ENSIPUG00000021556	-	91	59.799	ENSIPUG00000006916	-	76	59.799
ENSIPUG00000021556	-	84	30.208	ENSIPUG00000002510	-	53	30.208
ENSIPUG00000021556	-	83	63.068	ENSIPUG00000011073	-	99	63.068
ENSIPUG00000021556	-	97	55.497	ENSIPUG00000001941	-	87	62.245
ENSIPUG00000021556	-	88	67.089	ENSIPUG00000021518	-	91	65.581
ENSIPUG00000021556	-	99	65.327	ENSIPUG00000021515	-	91	65.327

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000021556	-	84	46.000	ENSAPOG00000013511	-	50	46.000	Acanthochromis_polyacanthus
ENSIPUG00000021556	-	91	46.970	ENSAPOG00000004328	-	88	46.970	Acanthochromis_polyacanthus
ENSIPUG00000021556	-	88	46.465	ENSACIG00000010739	-	78	46.465	Amphilophus_citrinellus
ENSIPUG00000021556	-	91	47.980	ENSAOCG00000007045	-	83	47.980	Amphiprion_ocellaris
ENSIPUG00000021556	-	88	49.265	ENSAPEG00000016483	-	58	49.265	Amphiprion_percula
ENSIPUG00000021556	-	91	47.980	ENSAPEG00000001596	-	74	47.980	Amphiprion_percula
ENSIPUG00000021556	-	91	49.495	ENSATEG00000006085	-	84	49.495	Anabas_testudineus
ENSIPUG00000021556	-	88	56.897	ENSACAG00000025537	-	100	56.897	Anolis_carolinensis
ENSIPUG00000021556	-	88	60.000	ENSACAG00000000082	-	99	60.000	Anolis_carolinensis
ENSIPUG00000021556	-	83	65.347	ENSAMXG00000033013	-	81	65.347	Astyanax_mexicanus
ENSIPUG00000021556	-	89	61.932	ENSAMXG00000036257	-	91	61.932	Astyanax_mexicanus
ENSIPUG00000021556	-	95	69.466	ENSAMXG00000035949	-	78	69.466	Astyanax_mexicanus
ENSIPUG00000021556	-	99	57.219	ENSAMXG00000012873	-	93	59.649	Astyanax_mexicanus
ENSIPUG00000021556	-	84	57.979	ENSAMXG00000026143	-	93	57.979	Astyanax_mexicanus
ENSIPUG00000021556	-	98	59.574	ENSAMXG00000032237	-	96	59.574	Astyanax_mexicanus
ENSIPUG00000021556	-	90	66.667	ENSAMXG00000035145	-	64	66.667	Astyanax_mexicanus
ENSIPUG00000021556	-	91	47.980	ENSCVAG00000011235	-	89	47.980	Cyprinodon_variegatus
ENSIPUG00000021556	-	93	51.256	ENSELUG00000021287	-	80	51.256	Esox_lucius
ENSIPUG00000021556	-	90	49.733	ENSELUG00000013357	-	89	49.733	Esox_lucius
ENSIPUG00000021556	-	86	50.345	ENSELUG00000013844	-	76	42.593	Esox_lucius
ENSIPUG00000021556	-	97	50.000	ENSFHEG00000019915	-	82	50.000	Fundulus_heteroclitus
ENSIPUG00000021556	-	96	43.429	ENSGMOG00000003238	-	100	54.430	Gadus_morhua
ENSIPUG00000021556	-	96	47.264	ENSGAFG00000012977	-	97	47.264	Gambusia_affinis
ENSIPUG00000021556	-	98	51.471	ENSGAFG00000003150	-	83	51.471	Gambusia_affinis
ENSIPUG00000021556	-	91	50.000	ENSKMAG00000004988	-	85	50.000	Kryptolebias_marmoratus
ENSIPUG00000021556	-	89	46.552	ENSLOCG00000014366	-	94	46.552	Lepisosteus_oculatus
ENSIPUG00000021556	-	90	54.331	ENSLOCG00000014144	-	99	54.331	Lepisosteus_oculatus
ENSIPUG00000021556	-	96	49.265	ENSMAMG00000016542	-	66	49.265	Mastacembelus_armatus
ENSIPUG00000021556	-	96	42.697	ENSMAMG00000019301	-	95	49.664	Mastacembelus_armatus
ENSIPUG00000021556	-	83	50.000	ENSMMOG00000009852	-	77	50.000	Mola_mola
ENSIPUG00000021556	-	88	51.471	ENSMALG00000005554	-	91	51.471	Monopterus_albus
ENSIPUG00000021556	-	88	49.462	ENSOCUG00000005876	-	100	48.108	Oryctolagus_cuniculus
ENSIPUG00000021556	-	90	54.268	ENSPKIG00000006616	-	59	54.268	Paramormyrops_kingsleyae
ENSIPUG00000021556	-	84	43.541	ENSPMGG00000017633	-	91	43.541	Periophthalmus_magnuspinnatus
ENSIPUG00000021556	-	93	46.766	ENSPFOG00000010682	-	97	44.444	Poecilia_formosa
ENSIPUG00000021556	-	83	42.246	ENSPLAG00000002892	-	68	42.246	Poecilia_latipinna
ENSIPUG00000021556	-	91	46.766	ENSPMEG00000001399	-	89	46.766	Poecilia_mexicana
ENSIPUG00000021556	-	83	38.693	ENSPREG00000002582	-	60	38.693	Poecilia_reticulata
ENSIPUG00000021556	-	93	46.766	ENSPREG00000001386	-	89	46.766	Poecilia_reticulata
ENSIPUG00000021556	-	97	44.279	ENSPNAG00000025570	-	81	44.279	Pygocentrus_nattereri
ENSIPUG00000021556	-	95	67.839	ENSPNAG00000000219	-	91	67.839	Pygocentrus_nattereri
ENSIPUG00000021556	-	97	66.883	ENSPNAG00000015116	-	76	66.883	Pygocentrus_nattereri
ENSIPUG00000021556	-	83	54.774	ENSSFOG00015006108	-	59	54.774	Scleropages_formosus
ENSIPUG00000021556	-	83	62.500	ENSSMAG00000009115	-	81	62.500	Scophthalmus_maximus
ENSIPUG00000021556	-	91	48.990	ENSSDUG00000006463	-	88	48.990	Seriola_dumerili
ENSIPUG00000021556	-	91	50.000	ENSSDUG00000002195	-	89	50.000	Seriola_dumerili
ENSIPUG00000021556	-	97	44.221	ENSSLDG00000020727	-	99	49.123	Seriola_lalandi_dorsalis
ENSIPUG00000021556	-	91	49.495	ENSSLDG00000006724	-	99	48.588	Seriola_lalandi_dorsalis
ENSIPUG00000021556	-	89	51.759	ENSSPAG00000021008	-	96	48.387	Stegastes_partitus
ENSIPUG00000021556	-	91	46.358	ENSSPAG00000012960	-	81	46.358	Stegastes_partitus
ENSIPUG00000021556	-	84	50.000	ENSTRUG00000021675	-	79	50.000	Takifugu_rubripes
ENSIPUG00000021556	-	98	46.296	ENSTRUG00000005321	-	98	47.500	Takifugu_rubripes
ENSIPUG00000021556	-	94	47.573	ENSTNIG00000008200	-	98	47.573	Tetraodon_nigroviridis
ENSIPUG00000021556	-	84	50.833	ENSTNIG00000000320	-	100	50.833	Tetraodon_nigroviridis
ENSIPUG00000021556	-	93	55.330	ENSXETG00000006575	znf420	77	55.330	Xenopus_tropicalis
ENSIPUG00000021556	-	88	43.871	ENSXCOG00000009665	-	83	43.871	Xiphophorus_couchianus
ENSIPUG00000021556	-	93	47.264	ENSXMAG00000028625	-	89	47.264	Xiphophorus_maculatus