EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000021642 (Gene tree)
Gene ID: 108263564
Gene Symbol: papolg
Alias: zgc:63762
Full Name: poly(A) polymerase gamma
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 14795 bases
Position: chr3:14727721-14742515
Accession: 108263564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000032354	PAP_RNA-bind	PF04926.15	1.2e-28	1	2
ENSIPUP00000032354	PAP_RNA-bind	PF04926.15	1.2e-28	2	2
ENSIPUP00000032282	PAP_RNA-bind	PF04926.15	1.3e-28	1	2
ENSIPUP00000032282	PAP_RNA-bind	PF04926.15	1.3e-28	2	2
ENSIPUP00000032305	PAP_RNA-bind	PF04926.15	1.4e-28	1	2
ENSIPUP00000032305	PAP_RNA-bind	PF04926.15	1.4e-28	2	2
ENSIPUP00000032328	PAP_RNA-bind	PF04926.15	1.4e-28	1	2
ENSIPUP00000032328	PAP_RNA-bind	PF04926.15	1.4e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000033581	-	2511	XM_017464515	ENSIPUP00000032305	748 (aa)	XP_017320004	A0A2D0QQK5
ENSIPUT00000033634	-	2142	-	ENSIPUP00000032354	713 (aa)	-	-
ENSIPUT00000033558	-	2549	XM_017464507	ENSIPUP00000032282	740 (aa)	XP_017319996	A0A2D0QND7
ENSIPUT00000033605	-	2432	XM_017464513	ENSIPUP00000032328	750 (aa)	XP_017320002	A0A2D0QND3

Gene Model

Click here to download ENSIPUG00000021642's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000021642's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000021642	papolg	99	56.944	ENSIPUG00000005919	papola	99	56.943

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000021642	papolg	100	73.128	ENSG00000115421	PAPOLG	100	88.034	Homo_sapiens
ENSIPUG00000021642	papolg	100	79.515	ENSAPOG00000004798	papolg	99	79.521	Acanthochromis_polyacanthus
ENSIPUG00000021642	papolg	100	73.154	ENSAMEG00000018227	PAPOLG	100	71.879	Ailuropoda_melanoleuca
ENSIPUG00000021642	papolg	100	76.111	ENSACIG00000010546	papolg	99	76.210	Amphilophus_citrinellus
ENSIPUG00000021642	papolg	100	79.650	ENSAOCG00000010254	papolg	99	79.973	Amphiprion_ocellaris
ENSIPUG00000021642	papolg	100	79.650	ENSAPEG00000006944	papolg	99	79.654	Amphiprion_percula
ENSIPUG00000021642	papolg	100	79.650	ENSATEG00000009007	papolg	99	79.654	Anabas_testudineus
ENSIPUG00000021642	papolg	99	66.935	ENSAPLG00000006813	PAPOLG	99	67.116	Anas_platyrhynchos
ENSIPUG00000021642	papolg	82	59.187	ENSACAG00000015048	-	100	59.539	Anolis_carolinensis
ENSIPUG00000021642	papolg	100	72.995	ENSANAG00000024627	PAPOLG	100	72.665	Aotus_nancymaae
ENSIPUG00000021642	papolg	100	76.216	ENSACLG00000015592	papolg	99	76.501	Astatotilapia_calliptera
ENSIPUG00000021642	papolg	100	88.425	ENSAMXG00000004611	papolg	100	88.313	Astyanax_mexicanus
ENSIPUG00000021642	papolg	100	73.020	ENSBTAG00000007414	PAPOLG	100	71.932	Bos_taurus
ENSIPUG00000021642	papolg	100	72.861	ENSCJAG00000009102	PAPOLG	100	71.859	Callithrix_jacchus
ENSIPUG00000021642	papolg	100	73.289	ENSCAFG00000002975	PAPOLG	91	71.932	Canis_familiaris
ENSIPUG00000021642	papolg	100	73.425	ENSCAFG00020026859	PAPOLG	99	74.646	Canis_lupus_dingo
ENSIPUG00000021642	papolg	100	72.886	ENSCHIG00000015082	PAPOLG	100	71.802	Capra_hircus
ENSIPUG00000021642	papolg	100	72.546	ENSTSYG00000004947	PAPOLG	100	72.120	Carlito_syrichta
ENSIPUG00000021642	papolg	53	81.627	ENSCAPG00000014901	-	100	81.627	Cavia_aperea
ENSIPUG00000021642	papolg	100	73.056	ENSCPOG00000010306	PAPOLG	100	71.736	Cavia_porcellus
ENSIPUG00000021642	papolg	100	72.861	ENSCCAG00000026893	PAPOLG	100	72.665	Cebus_capucinus
ENSIPUG00000021642	papolg	91	82.960	ENSCATG00000044395	PAPOLG	100	81.974	Cercocebus_atys
ENSIPUG00000021642	papolg	100	73.056	ENSCLAG00000008603	PAPOLG	100	73.016	Chinchilla_lanigera
ENSIPUG00000021642	papolg	100	72.727	ENSCSAG00000014408	PAPOLG	100	71.785	Chlorocebus_sabaeus
ENSIPUG00000021642	papolg	90	71.131	ENSCHOG00000014028	PAPOLG	100	71.280	Choloepus_hoffmanni
ENSIPUG00000021642	papolg	70	63.727	ENSCING00000024664	-	93	63.727	Ciona_intestinalis
ENSIPUG00000021642	papolg	68	65.164	ENSCSAVG00000009085	-	97	65.164	Ciona_savignyi
ENSIPUG00000021642	papolg	100	72.727	ENSCANG00000038120	PAPOLG	100	72.527	Colobus_angolensis_palliatus
ENSIPUG00000021642	papolg	100	72.340	ENSCGRG00001014951	Papolg	100	71.680	Cricetulus_griseus_chok1gshd
ENSIPUG00000021642	papolg	100	72.340	ENSCGRG00000005552	-	100	71.680	Cricetulus_griseus_crigri
ENSIPUG00000021642	papolg	100	79.167	ENSCSEG00000000771	papolg	99	79.334	Cynoglossus_semilaevis
ENSIPUG00000021642	papolg	88	86.679	ENSCVAG00000016602	papolg	97	83.156	Cyprinodon_variegatus
ENSIPUG00000021642	papolg	100	86.152	ENSDARG00000012141	papolg	100	86.152	Danio_rerio
ENSIPUG00000021642	papolg	100	70.509	ENSDNOG00000011326	PAPOLG	100	69.777	Dasypus_novemcinctus
ENSIPUG00000021642	papolg	60	86.247	ENSDORG00000016228	Papolg	100	86.311	Dipodomys_ordii
ENSIPUG00000021642	papolg	99	58.988	ENSETEG00000011815	PAPOLG	100	58.498	Echinops_telfairi
ENSIPUG00000021642	papolg	60	71.802	ENSEBUG00000004020	papolg	87	71.802	Eptatretus_burgeri
ENSIPUG00000021642	papolg	65	57.849	ENSEBUG00000005042	-	79	57.849	Eptatretus_burgeri
ENSIPUG00000021642	papolg	100	73.324	ENSEASG00005002038	PAPOLG	100	72.099	Equus_asinus_asinus
ENSIPUG00000021642	papolg	100	73.324	ENSECAG00000009859	PAPOLG	98	72.259	Equus_caballus
ENSIPUG00000021642	papolg	100	65.013	ENSEEUG00000006196	PAPOLG	100	64.729	Erinaceus_europaeus
ENSIPUG00000021642	papolg	100	80.814	ENSELUG00000014497	papolg	99	80.687	Esox_lucius
ENSIPUG00000021642	papolg	100	72.788	ENSFCAG00000026126	PAPOLG	100	71.708	Felis_catus
ENSIPUG00000021642	papolg	99	60.963	ENSFALG00000011079	PAPOLG	97	60.658	Ficedula_albicollis
ENSIPUG00000021642	papolg	100	73.056	ENSFDAG00000010662	PAPOLG	97	72.099	Fukomys_damarensis
ENSIPUG00000021642	papolg	67	68.616	ENSFHEG00000019080	papolg	90	69.020	Fundulus_heteroclitus
ENSIPUG00000021642	papolg	90	88.768	ENSGMOG00000018772	papolg	93	88.768	Gadus_morhua
ENSIPUG00000021642	papolg	100	65.223	ENSGALG00000007853	PAPOLG	100	65.223	Gallus_gallus
ENSIPUG00000021642	papolg	100	75.265	ENSGAFG00000003263	papolg	99	75.263	Gambusia_affinis
ENSIPUG00000021642	papolg	100	77.658	ENSGACG00000002718	papolg	100	77.719	Gasterosteus_aculeatus
ENSIPUG00000021642	papolg	100	72.665	ENSGGOG00000006083	PAPOLG	100	72.665	Gorilla_gorilla
ENSIPUG00000021642	papolg	88	88.810	ENSHBUG00000004882	papolg	99	76.802	Haplochromis_burtoni
ENSIPUG00000021642	papolg	100	72.654	ENSHGLG00000019610	PAPOLG	100	71.680	Heterocephalus_glaber_female
ENSIPUG00000021642	papolg	100	72.654	ENSHGLG00100010429	PAPOLG	99	71.795	Heterocephalus_glaber_male
ENSIPUG00000021642	papolg	100	78.302	ENSHCOG00000006782	papolg	99	78.121	Hippocampus_comes
ENSIPUG00000021642	papolg	100	72.995	ENSSTOG00000010861	PAPOLG	100	71.912	Ictidomys_tridecemlineatus
ENSIPUG00000021642	papolg	60	86.480	ENSJJAG00000015601	Papolg	100	86.543	Jaculus_jaculus
ENSIPUG00000021642	papolg	100	77.224	ENSKMAG00000016439	papolg	99	76.862	Kryptolebias_marmoratus
ENSIPUG00000021642	papolg	97	88.632	ENSLBEG00000023218	papolg	99	75.412	Labrus_bergylta
ENSIPUG00000021642	papolg	100	67.947	ENSLACG00000009543	PAPOLG	100	67.188	Latimeria_chalumnae
ENSIPUG00000021642	papolg	100	79.297	ENSLOCG00000016130	papolg	100	79.270	Lepisosteus_oculatus
ENSIPUG00000021642	papolg	100	72.252	ENSLAFG00000010404	PAPOLG	100	86.014	Loxodonta_africana
ENSIPUG00000021642	papolg	100	72.995	ENSMFAG00000042450	PAPOLG	100	72.047	Macaca_fascicularis
ENSIPUG00000021642	papolg	100	72.995	ENSMMUG00000000498	PAPOLG	100	72.047	Macaca_mulatta
ENSIPUG00000021642	papolg	100	65.471	ENSMNEG00000035939	PAPOLG	100	64.668	Macaca_nemestrina
ENSIPUG00000021642	papolg	100	72.861	ENSMLEG00000039462	PAPOLG	100	72.665	Mandrillus_leucophaeus
ENSIPUG00000021642	papolg	100	80.054	ENSMAMG00000010667	papolg	99	80.458	Mastacembelus_armatus
ENSIPUG00000021642	papolg	99	78.011	ENSMZEG00005018140	papolg	99	78.333	Maylandia_zebra
ENSIPUG00000021642	papolg	99	64.738	ENSMGAG00000001741	PAPOLG	100	63.467	Meleagris_gallopavo
ENSIPUG00000021642	papolg	100	72.386	ENSMAUG00000009088	Papolg	99	71.900	Mesocricetus_auratus
ENSIPUG00000021642	papolg	100	73.087	ENSMICG00000010042	PAPOLG	100	73.087	Microcebus_murinus
ENSIPUG00000021642	papolg	100	72.922	ENSMOCG00000006857	Papolg	100	71.990	Microtus_ochrogaster
ENSIPUG00000021642	papolg	100	79.570	ENSMMOG00000008020	papolg	99	79.570	Mola_mola
ENSIPUG00000021642	papolg	99	72.969	ENSMODG00000002160	PAPOLG	99	72.667	Monodelphis_domestica
ENSIPUG00000021642	papolg	100	77.660	ENSMALG00000007012	papolg	99	78.191	Monopterus_albus
ENSIPUG00000021642	papolg	100	72.727	MGP_CAROLIEiJ_G0016144	Papolg	99	87.588	Mus_caroli
ENSIPUG00000021642	papolg	100	72.460	ENSMUSG00000020273	Papolg	99	87.588	Mus_musculus
ENSIPUG00000021642	papolg	100	72.326	MGP_PahariEiJ_G0016746	Papolg	100	71.658	Mus_pahari
ENSIPUG00000021642	papolg	100	72.386	MGP_SPRETEiJ_G0016987	Papolg	99	87.588	Mus_spretus
ENSIPUG00000021642	papolg	100	72.886	ENSMPUG00000005165	PAPOLG	90	71.932	Mustela_putorius_furo
ENSIPUG00000021642	papolg	100	72.207	ENSMLUG00000009853	PAPOLG	100	71.879	Myotis_lucifugus
ENSIPUG00000021642	papolg	100	72.922	ENSNGAG00000001120	Papolg	100	72.237	Nannospalax_galili
ENSIPUG00000021642	papolg	99	68.633	ENSNBRG00000011943	papolg	98	69.303	Neolamprologus_brichardi
ENSIPUG00000021642	papolg	60	86.014	ENSNLEG00000009507	-	100	86.079	Nomascus_leucogenys
ENSIPUG00000021642	papolg	79	67.808	ENSMEUG00000013605	-	84	67.808	Notamacropus_eugenii
ENSIPUG00000021642	papolg	100	72.118	ENSOPRG00000009630	PAPOLG	100	71.056	Ochotona_princeps
ENSIPUG00000021642	papolg	60	83.333	ENSODEG00000012424	PAPOLG	100	83.333	Octodon_degus
ENSIPUG00000021642	papolg	100	71.409	ENSONIG00000002985	papolg	100	71.202	Oreochromis_niloticus
ENSIPUG00000021642	papolg	100	73.483	ENSOANG00000012403	PAPOLG	99	73.342	Ornithorhynchus_anatinus
ENSIPUG00000021642	papolg	100	72.326	ENSOCUG00000004962	PAPOLG	100	71.634	Oryctolagus_cuniculus
ENSIPUG00000021642	papolg	100	77.584	ENSORLG00000001577	papolg	99	77.748	Oryzias_latipes
ENSIPUG00000021642	papolg	100	77.285	ENSORLG00020002482	papolg	99	77.586	Oryzias_latipes_hni
ENSIPUG00000021642	papolg	100	77.315	ENSORLG00015008836	papolg	99	77.483	Oryzias_latipes_hsok
ENSIPUG00000021642	papolg	100	78.619	ENSOMEG00000001406	papolg	99	78.619	Oryzias_melastigma
ENSIPUG00000021642	papolg	59	61.573	ENSOGAG00000003145	PAPOLG	100	62.037	Otolemur_garnettii
ENSIPUG00000021642	papolg	100	72.886	ENSOARG00000001563	PAPOLG	91	71.802	Ovis_aries
ENSIPUG00000021642	papolg	100	73.128	ENSPPAG00000019917	PAPOLG	100	72.940	Pan_paniscus
ENSIPUG00000021642	papolg	100	72.788	ENSPPRG00000023250	PAPOLG	100	71.708	Panthera_pardus
ENSIPUG00000021642	papolg	100	72.654	ENSPTIG00000018126	PAPOLG	100	71.578	Panthera_tigris_altaica
ENSIPUG00000021642	papolg	100	73.128	ENSPTRG00000011948	PAPOLG	100	72.940	Pan_troglodytes
ENSIPUG00000021642	papolg	100	69.467	ENSPANG00000014543	PAPOLG	100	68.586	Papio_anubis
ENSIPUG00000021642	papolg	93	77.201	ENSPKIG00000006027	PAPOLG	98	76.956	Paramormyrops_kingsleyae
ENSIPUG00000021642	papolg	100	77.718	ENSPKIG00000003313	papolg	100	77.483	Paramormyrops_kingsleyae
ENSIPUG00000021642	papolg	99	70.755	ENSPSIG00000013663	PAPOLG	98	69.489	Pelodiscus_sinensis
ENSIPUG00000021642	papolg	100	72.400	ENSPEMG00000008960	-	100	71.935	Peromyscus_maniculatus_bairdii
ENSIPUG00000021642	papolg	100	52.918	ENSPMAG00000002961	papolg	99	52.979	Petromyzon_marinus
ENSIPUG00000021642	papolg	69	63.508	ENSPMAG00000004864	-	98	63.508	Petromyzon_marinus
ENSIPUG00000021642	papolg	100	72.585	ENSPCIG00000028094	PAPOLG	100	71.891	Phascolarctos_cinereus
ENSIPUG00000021642	papolg	100	75.464	ENSPFOG00000012909	papolg	99	75.626	Poecilia_formosa
ENSIPUG00000021642	papolg	100	75.701	ENSPLAG00000018445	papolg	99	75.626	Poecilia_latipinna
ENSIPUG00000021642	papolg	100	75.364	ENSPMEG00000003961	papolg	99	75.195	Poecilia_mexicana
ENSIPUG00000021642	papolg	100	74.474	ENSPREG00000010358	papolg	99	74.707	Poecilia_reticulata
ENSIPUG00000021642	papolg	100	72.727	ENSPPYG00000012392	PAPOLG	100	71.654	Pongo_abelii
ENSIPUG00000021642	papolg	100	64.409	ENSPCAG00000012297	PAPOLG	100	64.276	Procavia_capensis
ENSIPUG00000021642	papolg	100	65.410	ENSPCOG00000027306	PAPOLG	100	66.350	Propithecus_coquereli
ENSIPUG00000021642	papolg	89	81.752	ENSPVAG00000013541	PAPOLG	87	81.752	Pteropus_vampyrus
ENSIPUG00000021642	papolg	100	78.225	ENSPNYG00000006729	papolg	99	78.225	Pundamilia_nyererei
ENSIPUG00000021642	papolg	100	90.541	ENSPNAG00000015521	papolg	100	90.267	Pygocentrus_nattereri
ENSIPUG00000021642	papolg	100	72.460	ENSRNOG00000006261	Papolg	100	72.296	Rattus_norvegicus
ENSIPUG00000021642	papolg	100	68.224	ENSRBIG00000040086	PAPOLG	100	67.366	Rhinopithecus_bieti
ENSIPUG00000021642	papolg	100	73.031	ENSRROG00000035954	PAPOLG	100	72.084	Rhinopithecus_roxellana
ENSIPUG00000021642	papolg	100	72.933	ENSSBOG00000026194	PAPOLG	100	72.665	Saimiri_boliviensis_boliviensis
ENSIPUG00000021642	papolg	95	73.056	ENSSHAG00000014942	PAPOLG	99	72.740	Sarcophilus_harrisii
ENSIPUG00000021642	papolg	100	68.524	ENSSFOG00015011874	papolg	100	68.524	Scleropages_formosus
ENSIPUG00000021642	papolg	100	75.984	ENSSFOG00015002383	papolg	100	75.690	Scleropages_formosus
ENSIPUG00000021642	papolg	95	89.945	ENSSMAG00000015598	papolg	99	74.651	Scophthalmus_maximus
ENSIPUG00000021642	papolg	100	79.650	ENSSDUG00000000912	papolg	99	79.122	Seriola_dumerili
ENSIPUG00000021642	papolg	100	79.515	ENSSLDG00000001217	papolg	99	78.989	Seriola_lalandi_dorsalis
ENSIPUG00000021642	papolg	100	69.973	ENSSPUG00000007491	PAPOLG	100	69.973	Sphenodon_punctatus
ENSIPUG00000021642	papolg	100	77.690	ENSSPAG00000009004	papolg	99	77.633	Stegastes_partitus
ENSIPUG00000021642	papolg	100	72.643	ENSSSCG00000008389	PAPOLG	100	71.838	Sus_scrofa
ENSIPUG00000021642	papolg	75	72.368	ENSTGUG00000006762	PAPOLG	98	72.368	Taeniopygia_guttata
ENSIPUG00000021642	papolg	100	76.860	ENSTRUG00000006410	papolg	99	76.860	Takifugu_rubripes
ENSIPUG00000021642	papolg	100	71.410	ENSTNIG00000017106	papolg	100	70.997	Tetraodon_nigroviridis
ENSIPUG00000021642	papolg	100	65.125	ENSTBEG00000002609	PAPOLG	100	65.086	Tupaia_belangeri
ENSIPUG00000021642	papolg	100	68.767	ENSTTRG00000006237	PAPOLG	100	68.783	Tursiops_truncatus
ENSIPUG00000021642	papolg	100	73.253	ENSUAMG00000011088	PAPOLG	100	72.470	Ursus_americanus
ENSIPUG00000021642	papolg	100	73.253	ENSUMAG00000019081	PAPOLG	90	72.318	Ursus_maritimus
ENSIPUG00000021642	papolg	100	70.107	ENSVPAG00000000492	PAPOLG	100	69.170	Vicugna_pacos
ENSIPUG00000021642	papolg	100	73.289	ENSVVUG00000010344	PAPOLG	99	73.113	Vulpes_vulpes
ENSIPUG00000021642	papolg	100	70.993	ENSXETG00000002208	papolg	100	70.976	Xenopus_tropicalis
ENSIPUG00000021642	papolg	70	90.581	ENSXCOG00000006611	papolg	73	90.581	Xiphophorus_couchianus
ENSIPUG00000021642	papolg	77	88.000	ENSXMAG00000007383	papolg	95	88.000	Xiphophorus_maculatus