EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000021651 (Gene tree)
Gene ID: 108270890
Gene Symbol: si:dkey-93h22.8
Alias: fc32h05|fi41c08|im:7140483|wu:fc32h05|wu:fi41c08
Full Name: peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 14535 bases
Position: chr10:7363693-7378227
Accession: 108270890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000032197	RRM_1	PF00076.22	6.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000033471	-	4474	XM_017477882	ENSIPUP00000032197	1067 (aa)	XP_017333371	A0A2D0RT71

Gene Model

Click here to download ENSIPUG00000021651's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000021651's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000021651	si:dkey-93h22.8	54	62.581	ENSDARG00000090337	pprc1	80	62.581	Danio_rerio
ENSIPUG00000021651	si:dkey-93h22.8	99	40.054	ENSDARG00000098666	si:dkey-93h22.8	99	39.858	Danio_rerio
ENSIPUG00000021651	si:dkey-93h22.8	66	70.312	ENSGAFG00000011120	si:dkey-93h22.8	67	62.821	Gambusia_affinis
ENSIPUG00000021651	si:dkey-93h22.8	52	63.415	ENSKMAG00000020881	pprc1	60	63.415	Kryptolebias_marmoratus
ENSIPUG00000021651	si:dkey-93h22.8	51	71.134	ENSLBEG00000024075	-	83	54.335	Labrus_bergylta
ENSIPUG00000021651	si:dkey-93h22.8	59	60.000	ENSMAMG00000011169	-	66	60.000	Mastacembelus_armatus
ENSIPUG00000021651	si:dkey-93h22.8	58	62.179	ENSMZEG00005008228	-	51	62.179	Maylandia_zebra
ENSIPUG00000021651	si:dkey-93h22.8	50	76.316	ENSMMOG00000010659	-	85	75.652	Mola_mola
ENSIPUG00000021651	si:dkey-93h22.8	52	36.638	ENSMALG00000016857	pprc1	59	64.072	Monopterus_albus
ENSIPUG00000021651	si:dkey-93h22.8	56	63.057	ENSMALG00000005052	-	64	60.645	Monopterus_albus
ENSIPUG00000021651	si:dkey-93h22.8	52	62.595	ENSORLG00000008410	pprc1	56	60.000	Oryzias_latipes
ENSIPUG00000021651	si:dkey-93h22.8	78	57.616	ENSORLG00000012355	si:dkey-93h22.8	83	57.616	Oryzias_latipes
ENSIPUG00000021651	si:dkey-93h22.8	52	62.595	ENSORLG00020002550	pprc1	65	60.000	Oryzias_latipes_hni
ENSIPUG00000021651	si:dkey-93h22.8	55	60.736	ENSORLG00015000733	pprc1	73	58.883	Oryzias_latipes_hsok
ENSIPUG00000021651	si:dkey-93h22.8	79	59.355	ENSOMEG00000012140	si:dkey-93h22.8	92	59.355	Oryzias_melastigma
ENSIPUG00000021651	si:dkey-93h22.8	53	32.618	ENSOMEG00000002727	pprc1	50	34.158	Oryzias_melastigma
ENSIPUG00000021651	si:dkey-93h22.8	51	63.580	ENSPKIG00000010691	pprc1	82	63.694	Paramormyrops_kingsleyae
ENSIPUG00000021651	si:dkey-93h22.8	75	69.531	ENSPFOG00000001320	si:dkey-93h22.8	66	60.645	Poecilia_formosa
ENSIPUG00000021651	si:dkey-93h22.8	68	69.531	ENSPMEG00000014605	si:dkey-93h22.8	66	60.645	Poecilia_mexicana
ENSIPUG00000021651	si:dkey-93h22.8	65	64.516	ENSPREG00000020657	pprc1	68	62.431	Poecilia_reticulata
ENSIPUG00000021651	si:dkey-93h22.8	68	69.531	ENSPREG00000000446	si:dkey-93h22.8	67	60.645	Poecilia_reticulata
ENSIPUG00000021651	si:dkey-93h22.8	58	62.179	ENSPNYG00000002682	-	63	62.179	Pundamilia_nyererei
ENSIPUG00000021651	si:dkey-93h22.8	65	65.409	ENSSDUG00000022798	pprc1	52	64.024	Seriola_dumerili
ENSIPUG00000021651	si:dkey-93h22.8	51	69.531	ENSSPAG00000010602	si:dkey-93h22.8	82	69.531	Stegastes_partitus
ENSIPUG00000021651	si:dkey-93h22.8	68	69.531	ENSXMAG00000000243	si:dkey-93h22.8	67	60.645	Xiphophorus_maculatus