EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000021668 (Gene tree)
Gene ID: 108275899
Gene Symbol: spen
Alias: im:7148349|si:ch211-125c5.1
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 36440 bases
Position: chr15:17667548-17703987
Accession: 108275899
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000032222	RRM_5	PF13893.6	1.1e-07	1	2
ENSIPUP00000032222	RRM_5	PF13893.6	1.1e-07	2	2
ENSIPUP00000032222	RRM_1	PF00076.22	2e-41	1	3
ENSIPUP00000032222	RRM_1	PF00076.22	2e-41	2	3
ENSIPUP00000032222	RRM_1	PF00076.22	2e-41	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000033497	-	13275	XM_017486991	ENSIPUP00000032222	3459 (aa)	XP_017342480	A0A2D0SJK5

Gene Model

Click here to download ENSIPUG00000021668's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000021668's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000021668	spen	93	75.287	ENSIPUG00000018212	si:ch1073-335m2.2	99	75.723

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000021668	spen	88	81.967	ENSG00000065526	SPEN	96	82.778	Homo_sapiens
ENSIPUG00000021668	spen	100	53.706	ENSAPOG00000009853	-	86	86.111	Acanthochromis_polyacanthus
ENSIPUG00000021668	spen	88	82.249	ENSAPOG00000011411	si:ch1073-335m2.2	99	82.249	Acanthochromis_polyacanthus
ENSIPUG00000021668	spen	69	80.874	ENSAMEG00000011817	SPEN	96	81.667	Ailuropoda_melanoleuca
ENSIPUG00000021668	spen	84	73.896	ENSAOCG00000008077	si:ch1073-335m2.2	99	54.673	Amphiprion_ocellaris
ENSIPUG00000021668	spen	100	53.626	ENSAOCG00000014505	-	100	53.677	Amphiprion_ocellaris
ENSIPUG00000021668	spen	96	66.188	ENSAPEG00000013515	si:ch1073-335m2.2	100	62.249	Amphiprion_percula
ENSIPUG00000021668	spen	100	53.612	ENSAPEG00000010288	-	100	53.662	Amphiprion_percula
ENSIPUG00000021668	spen	99	60.156	ENSATEG00000007674	si:ch1073-335m2.2	100	60.156	Anabas_testudineus
ENSIPUG00000021668	spen	100	53.842	ENSATEG00000005627	-	100	53.696	Anabas_testudineus
ENSIPUG00000021668	spen	98	78.846	ENSAPLG00000012618	SPEN	99	79.739	Anas_platyrhynchos
ENSIPUG00000021668	spen	97	78.481	ENSANAG00000034428	SPEN	96	79.355	Aotus_nancymaae
ENSIPUG00000021668	spen	97	77.586	ENSACLG00000021433	si:ch1073-335m2.2	100	60.547	Astatotilapia_calliptera
ENSIPUG00000021668	spen	100	52.855	ENSACLG00000016922	-	100	52.668	Astatotilapia_calliptera
ENSIPUG00000021668	spen	100	70.414	ENSAMXG00000012485	spen	100	69.907	Astyanax_mexicanus
ENSIPUG00000021668	spen	98	80.874	ENSBTAG00000018729	SPEN	97	81.667	Bos_taurus
ENSIPUG00000021668	spen	98	81.967	ENSCJAG00000008527	SPEN	96	82.778	Callithrix_jacchus
ENSIPUG00000021668	spen	85	81.967	ENSCAFG00000016132	-	91	82.778	Canis_familiaris
ENSIPUG00000021668	spen	87	81.967	ENSCHIG00000025070	SPEN	97	82.778	Capra_hircus
ENSIPUG00000021668	spen	80	46.236	ENSTSYG00000036016	SPEN	85	46.154	Carlito_syrichta
ENSIPUG00000021668	spen	89	46.949	ENSCAPG00000013803	SPEN	99	79.739	Cavia_aperea
ENSIPUG00000021668	spen	88	47.228	ENSCPOG00000014036	SPEN	99	79.605	Cavia_porcellus
ENSIPUG00000021668	spen	98	81.967	ENSCCAG00000020258	SPEN	86	82.778	Cebus_capucinus
ENSIPUG00000021668	spen	88	81.967	ENSCATG00000015079	SPEN	86	82.778	Cercocebus_atys
ENSIPUG00000021668	spen	88	81.967	ENSCSAG00000000841	SPEN	96	82.778	Chlorocebus_sabaeus
ENSIPUG00000021668	spen	98	81.967	ENSCPBG00000010477	SPEN	99	82.778	Chrysemys_picta_bellii
ENSIPUG00000021668	spen	88	72.881	ENSCANG00000034547	SPEN	86	73.563	Colobus_angolensis_palliatus
ENSIPUG00000021668	spen	87	81.967	ENSCGRG00001007725	Spen	97	82.778	Cricetulus_griseus_chok1gshd
ENSIPUG00000021668	spen	87	78.710	ENSCGRG00000010581	Spen	97	79.605	Cricetulus_griseus_crigri
ENSIPUG00000021668	spen	100	52.315	ENSCSEG00000003915	-	100	52.472	Cynoglossus_semilaevis
ENSIPUG00000021668	spen	94	72.680	ENSCVAG00000009075	si:ch1073-335m2.2	100	72.680	Cyprinodon_variegatus
ENSIPUG00000021668	spen	100	51.977	ENSCVAG00000016346	-	100	52.020	Cyprinodon_variegatus
ENSIPUG00000021668	spen	100	59.832	ENSDARG00000074245	spen	100	93.333	Danio_rerio
ENSIPUG00000021668	spen	97	77.528	ENSDARG00000074332	si:ch1073-335m2.2	99	75.135	Danio_rerio
ENSIPUG00000021668	spen	87	81.421	ENSDNOG00000041948	SPEN	86	82.222	Dasypus_novemcinctus
ENSIPUG00000021668	spen	95	78.000	ENSDORG00000023909	Spen	99	78.912	Dipodomys_ordii
ENSIPUG00000021668	spen	94	86.667	ENSEASG00005015911	SPEN	96	82.778	Equus_asinus_asinus
ENSIPUG00000021668	spen	94	86.667	ENSECAG00000008833	SPEN	96	82.778	Equus_caballus
ENSIPUG00000021668	spen	64	86.047	ENSEEUG00000010255	SPEN	66	86.047	Erinaceus_europaeus
ENSIPUG00000021668	spen	97	75.648	ENSELUG00000007726	si:ch1073-335m2.2	94	75.648	Esox_lucius
ENSIPUG00000021668	spen	87	44.055	ENSFALG00000003551	SPEN	100	43.946	Ficedula_albicollis
ENSIPUG00000021668	spen	88	47.094	ENSFDAG00000010212	SPEN	88	78.912	Fukomys_damarensis
ENSIPUG00000021668	spen	94	73.711	ENSFHEG00000004544	si:ch1073-335m2.2	96	73.711	Fundulus_heteroclitus
ENSIPUG00000021668	spen	100	41.767	ENSGMOG00000008156	si:ch1073-335m2.2	100	41.281	Gadus_morhua
ENSIPUG00000021668	spen	95	82.162	ENSGMOG00000008397	-	98	83.889	Gadus_morhua
ENSIPUG00000021668	spen	98	81.967	ENSGALG00000036932	SPEN	99	82.778	Gallus_gallus
ENSIPUG00000021668	spen	64	73.196	ENSGAFG00000021570	si:ch1073-335m2.2	100	73.196	Gambusia_affinis
ENSIPUG00000021668	spen	100	51.929	ENSGAFG00000015819	-	89	64.331	Gambusia_affinis
ENSIPUG00000021668	spen	100	51.899	ENSGACG00000005341	-	100	51.915	Gasterosteus_aculeatus
ENSIPUG00000021668	spen	100	41.509	ENSGACG00000001176	si:ch1073-335m2.2	100	41.457	Gasterosteus_aculeatus
ENSIPUG00000021668	spen	98	81.967	ENSGAGG00000020785	SPEN	99	82.778	Gopherus_agassizii
ENSIPUG00000021668	spen	88	81.967	ENSGGOG00000012041	SPEN	96	82.778	Gorilla_gorilla
ENSIPUG00000021668	spen	97	77.586	ENSHBUG00000023253	si:ch1073-335m2.2	100	61.089	Haplochromis_burtoni
ENSIPUG00000021668	spen	100	52.897	ENSHBUG00000020626	-	100	52.682	Haplochromis_burtoni
ENSIPUG00000021668	spen	83	54.582	ENSHGLG00000019259	SPEN	75	82.778	Heterocephalus_glaber_female
ENSIPUG00000021668	spen	68	55.271	ENSHGLG00100019294	SPEN	75	78.912	Heterocephalus_glaber_male
ENSIPUG00000021668	spen	93	80.159	ENSHCOG00000006004	si:ch1073-335m2.2	99	80.159	Hippocampus_comes
ENSIPUG00000021668	spen	87	78.000	ENSSTOG00000021428	SPEN	97	78.912	Ictidomys_tridecemlineatus
ENSIPUG00000021668	spen	98	80.874	ENSJJAG00000010882	Spen	98	81.667	Jaculus_jaculus
ENSIPUG00000021668	spen	54	73.196	ENSKMAG00000021725	si:ch1073-335m2.2	94	73.196	Kryptolebias_marmoratus
ENSIPUG00000021668	spen	100	52.482	ENSKMAG00000003882	-	100	52.132	Kryptolebias_marmoratus
ENSIPUG00000021668	spen	97	81.325	ENSLBEG00000020855	si:ch1073-335m2.2	99	81.325	Labrus_bergylta
ENSIPUG00000021668	spen	84	46.899	ENSLBEG00000019129	-	100	46.514	Labrus_bergylta
ENSIPUG00000021668	spen	98	81.421	ENSLACG00000003258	SPEN	77	82.222	Latimeria_chalumnae
ENSIPUG00000021668	spen	97	83.448	ENSLOCG00000007896	si:ch1073-335m2.2	98	83.448	Lepisosteus_oculatus
ENSIPUG00000021668	spen	88	78.481	ENSLAFG00000004524	SPEN	86	79.355	Loxodonta_africana
ENSIPUG00000021668	spen	88	81.967	ENSMFAG00000041974	SPEN	86	82.778	Macaca_fascicularis
ENSIPUG00000021668	spen	88	81.967	ENSMMUG00000008026	SPEN	86	82.778	Macaca_mulatta
ENSIPUG00000021668	spen	88	81.967	ENSMNEG00000042402	SPEN	86	82.778	Macaca_nemestrina
ENSIPUG00000021668	spen	88	71.038	ENSMLEG00000039293	SPEN	86	71.667	Mandrillus_leucophaeus
ENSIPUG00000021668	spen	97	82.036	ENSMAMG00000023870	si:ch1073-335m2.2	100	41.880	Mastacembelus_armatus
ENSIPUG00000021668	spen	97	77.586	ENSMZEG00005011762	si:ch1073-335m2.2	100	60.547	Maylandia_zebra
ENSIPUG00000021668	spen	89	50.124	ENSMZEG00005021491	-	99	49.923	Maylandia_zebra
ENSIPUG00000021668	spen	87	81.421	ENSMAUG00000008318	Spen	95	82.222	Mesocricetus_auratus
ENSIPUG00000021668	spen	98	81.421	ENSMICG00000030994	SPEN	96	82.222	Microcebus_murinus
ENSIPUG00000021668	spen	87	81.421	ENSMOCG00000016083	Spen	97	82.222	Microtus_ochrogaster
ENSIPUG00000021668	spen	97	73.797	ENSMMOG00000021742	si:ch1073-335m2.2	99	77.586	Mola_mola
ENSIPUG00000021668	spen	100	45.041	ENSMODG00000003411	SPEN	99	82.778	Monodelphis_domestica
ENSIPUG00000021668	spen	100	53.654	ENSMALG00000008625	-	100	53.645	Monopterus_albus
ENSIPUG00000021668	spen	87	80.874	MGP_CAROLIEiJ_G0026745	Spen	97	81.667	Mus_caroli
ENSIPUG00000021668	spen	80	81.421	ENSMUSG00000040761	Spen	97	82.222	Mus_musculus
ENSIPUG00000021668	spen	98	80.874	MGP_PahariEiJ_G0029076	Spen	98	81.667	Mus_pahari
ENSIPUG00000021668	spen	80	80.874	MGP_SPRETEiJ_G0027724	Spen	97	81.667	Mus_spretus
ENSIPUG00000021668	spen	96	73.913	ENSMPUG00000016317	SPEN	96	75.000	Mustela_putorius_furo
ENSIPUG00000021668	spen	93	84.946	ENSMLUG00000010144	SPEN	92	84.946	Myotis_lucifugus
ENSIPUG00000021668	spen	94	81.967	ENSNGAG00000000641	Spen	99	82.778	Nannospalax_galili
ENSIPUG00000021668	spen	97	78.161	ENSNBRG00000005733	si:ch1073-335m2.2	100	60.547	Neolamprologus_brichardi
ENSIPUG00000021668	spen	84	47.966	ENSNBRG00000022090	-	100	47.764	Neolamprologus_brichardi
ENSIPUG00000021668	spen	87	78.481	ENSNLEG00000007652	SPEN	96	79.355	Nomascus_leucogenys
ENSIPUG00000021668	spen	90	80.208	ENSMEUG00000002422	SPEN	89	80.208	Notamacropus_eugenii
ENSIPUG00000021668	spen	86	78.065	ENSOPRG00000015800	SPEN	84	78.947	Ochotona_princeps
ENSIPUG00000021668	spen	100	52.664	ENSONIG00000006573	-	99	76.167	Oreochromis_niloticus
ENSIPUG00000021668	spen	88	61.714	ENSOCUG00000010840	SPEN	97	62.209	Oryctolagus_cuniculus
ENSIPUG00000021668	spen	87	45.301	ENSORLG00000028894	-	100	44.992	Oryzias_latipes
ENSIPUG00000021668	spen	87	45.403	ENSORLG00020007735	-	100	45.167	Oryzias_latipes_hni
ENSIPUG00000021668	spen	100	49.063	ENSORLG00015022085	-	100	48.833	Oryzias_latipes_hsok
ENSIPUG00000021668	spen	90	81.366	ENSORLG00015005537	si:ch1073-335m2.2	95	78.090	Oryzias_latipes_hsok
ENSIPUG00000021668	spen	100	49.313	ENSOMEG00000007639	-	100	48.864	Oryzias_melastigma
ENSIPUG00000021668	spen	50	78.652	ENSOMEG00000004509	si:ch1073-335m2.2	98	78.652	Oryzias_melastigma
ENSIPUG00000021668	spen	98	81.967	ENSOGAG00000025110	SPEN	96	82.778	Otolemur_garnettii
ENSIPUG00000021668	spen	98	73.864	ENSOARG00000008477	SPEN	86	74.566	Ovis_aries
ENSIPUG00000021668	spen	87	78.710	ENSPPAG00000035690	SPEN	86	79.605	Pan_paniscus
ENSIPUG00000021668	spen	88	81.967	ENSPTRG00000000210	SPEN	96	82.778	Pan_troglodytes
ENSIPUG00000021668	spen	88	81.967	ENSPANG00000006293	SPEN	86	82.778	Papio_anubis
ENSIPUG00000021668	spen	100	53.388	ENSPKIG00000002617	SPEN	90	65.714	Paramormyrops_kingsleyae
ENSIPUG00000021668	spen	97	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	100	100.000	Paramormyrops_kingsleyae
ENSIPUG00000021668	spen	98	78.846	ENSPSIG00000008026	SPEN	99	79.739	Pelodiscus_sinensis
ENSIPUG00000021668	spen	90	77.419	ENSPEMG00000022997	Spen	97	77.551	Peromyscus_maniculatus_bairdii
ENSIPUG00000021668	spen	52	74.112	ENSPFOG00000017986	si:ch1073-335m2.2	100	74.742	Poecilia_formosa
ENSIPUG00000021668	spen	61	74.112	ENSPLAG00000016625	si:ch1073-335m2.2	100	74.742	Poecilia_latipinna
ENSIPUG00000021668	spen	100	52.278	ENSPMEG00000006764	-	89	65.287	Poecilia_mexicana
ENSIPUG00000021668	spen	52	74.742	ENSPMEG00000002674	si:ch1073-335m2.2	100	74.742	Poecilia_mexicana
ENSIPUG00000021668	spen	100	52.197	ENSPREG00000010399	-	89	65.287	Poecilia_reticulata
ENSIPUG00000021668	spen	52	75.258	ENSPREG00000005357	si:ch1073-335m2.2	100	75.258	Poecilia_reticulata
ENSIPUG00000021668	spen	88	81.967	ENSPPYG00000001834	SPEN	96	82.778	Pongo_abelii
ENSIPUG00000021668	spen	86	72.222	ENSPCAG00000009543	SPEN	86	74.510	Procavia_capensis
ENSIPUG00000021668	spen	98	81.421	ENSPCOG00000021735	SPEN	96	82.222	Propithecus_coquereli
ENSIPUG00000021668	spen	65	80.874	ENSPVAG00000013794	SPEN	66	81.667	Pteropus_vampyrus
ENSIPUG00000021668	spen	97	77.586	ENSPNYG00000009042	si:ch1073-335m2.2	100	60.547	Pundamilia_nyererei
ENSIPUG00000021668	spen	100	52.897	ENSPNYG00000012379	-	100	52.710	Pundamilia_nyererei
ENSIPUG00000021668	spen	100	42.975	ENSPNAG00000011452	si:ch1073-335m2.2	99	76.404	Pygocentrus_nattereri
ENSIPUG00000021668	spen	100	73.384	ENSPNAG00000020795	spen	100	73.299	Pygocentrus_nattereri
ENSIPUG00000021668	spen	87	78.205	ENSRNOG00000033556	Spen	97	79.085	Rattus_norvegicus
ENSIPUG00000021668	spen	87	78.710	ENSRBIG00000039654	SPEN	86	79.605	Rhinopithecus_bieti
ENSIPUG00000021668	spen	87	78.481	ENSRROG00000035686	SPEN	85	79.355	Rhinopithecus_roxellana
ENSIPUG00000021668	spen	97	78.481	ENSSBOG00000028770	SPEN	96	79.355	Saimiri_boliviensis_boliviensis
ENSIPUG00000021668	spen	99	44.587	ENSSHAG00000004960	SPEN	99	77.358	Sarcophilus_harrisii
ENSIPUG00000021668	spen	100	54.253	ENSSFOG00015010267	si:ch1073-335m2.2	100	54.093	Scleropages_formosus
ENSIPUG00000021668	spen	86	63.889	ENSSFOG00015007131	si:ch1073-335m2.2	100	54.057	Scleropages_formosus
ENSIPUG00000021668	spen	100	53.368	ENSSMAG00000008996	-	100	53.313	Scophthalmus_maximus
ENSIPUG00000021668	spen	93	73.737	ENSSMAG00000000125	si:ch1073-335m2.2	95	60.938	Scophthalmus_maximus
ENSIPUG00000021668	spen	98	72.727	ENSSDUG00000008416	si:ch1073-335m2.2	100	72.727	Seriola_dumerili
ENSIPUG00000021668	spen	100	54.573	ENSSDUG00000003476	-	86	87.222	Seriola_dumerili
ENSIPUG00000021668	spen	100	54.305	ENSSLDG00000012950	-	86	87.222	Seriola_lalandi_dorsalis
ENSIPUG00000021668	spen	98	72.727	ENSSLDG00000023347	si:ch1073-335m2.2	94	72.727	Seriola_lalandi_dorsalis
ENSIPUG00000021668	spen	87	42.598	ENSSPUG00000001866	-	100	42.269	Sphenodon_punctatus
ENSIPUG00000021668	spen	100	53.622	ENSSPAG00000006014	-	89	67.197	Stegastes_partitus
ENSIPUG00000021668	spen	94	79.775	ENSSPAG00000012454	si:ch1073-335m2.2	52	82.840	Stegastes_partitus
ENSIPUG00000021668	spen	84	81.967	ENSSSCG00000034484	SPEN	95	82.778	Sus_scrofa
ENSIPUG00000021668	spen	86	66.667	ENSTRUG00000021008	si:ch1073-335m2.2	100	66.667	Takifugu_rubripes
ENSIPUG00000021668	spen	100	52.252	ENSTRUG00000024350	-	100	51.949	Takifugu_rubripes
ENSIPUG00000021668	spen	98	65.939	ENSTNIG00000014666	si:ch1073-335m2.2	73	65.939	Tetraodon_nigroviridis
ENSIPUG00000021668	spen	96	76.055	ENSTNIG00000010907	-	99	75.713	Tetraodon_nigroviridis
ENSIPUG00000021668	spen	69	84.409	ENSTBEG00000003628	SPEN	70	84.409	Tupaia_belangeri
ENSIPUG00000021668	spen	71	78.744	ENSTTRG00000015704	SPEN	69	79.605	Tursiops_truncatus
ENSIPUG00000021668	spen	69	81.967	ENSUAMG00000009600	SPEN	96	82.778	Ursus_americanus
ENSIPUG00000021668	spen	68	76.543	ENSUMAG00000021641	SPEN	96	77.358	Ursus_maritimus
ENSIPUG00000021668	spen	90	100.000	ENSVVUG00000028951	SPEN	95	100.000	Vulpes_vulpes
ENSIPUG00000021668	spen	95	77.049	ENSXETG00000023114	SPEN	99	77.778	Xenopus_tropicalis
ENSIPUG00000021668	spen	93	74.227	ENSXCOG00000004516	si:ch1073-335m2.2	100	74.227	Xiphophorus_couchianus
ENSIPUG00000021668	spen	100	52.106	ENSXMAG00000021384	-	89	63.175	Xiphophorus_maculatus
ENSIPUG00000021668	spen	93	73.711	ENSXMAG00000029887	si:ch1073-335m2.2	100	73.711	Xiphophorus_maculatus