EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000021822 (Gene tree)
Gene ID: 108257395
Gene Symbol: trit1
Alias: si:ch211-194e15.1
Full Name: tRNA isopentenyltransferase 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 50736 bases
Position: chr24:8799763-8850498
Accession: 108257395
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000032460	IPPT	PF01715.17	7.7e-67	1	1
ENSIPUP00000032467	IPPT	PF01715.17	9.6e-58	1	1
ENSIPUP00000032474	IPPT	PF01715.17	1.5e-47	1	1
ENSIPUP00000032474	zf-C2H2_jaz	PF12171.8	2.6e-06	1	1
ENSIPUP00000032467	zf-C2H2_jaz	PF12171.8	3.1e-06	1	1
ENSIPUP00000032460	zf-C2H2_jaz	PF12171.8	3.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000033750	-	1391	XM_017455134	ENSIPUP00000032467	456 (aa)	XP_017310623	A0A2D0PVT5
ENSIPUT00000033743	-	1904	XM_017455133	ENSIPUP00000032460	482 (aa)	XP_017310622	A0A2D0PX63
ENSIPUT00000033757	-	1948	-	ENSIPUP00000032474	434 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000021822's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000021822's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000021822	trit1	95	60.304	ENSG00000043514	TRIT1	99	66.279	Homo_sapiens
ENSIPUG00000021822	trit1	89	71.795	ENSAPOG00000020918	trit1	99	68.996	Acanthochromis_polyacanthus
ENSIPUG00000021822	trit1	93	60.841	ENSAMEG00000004342	TRIT1	95	60.841	Ailuropoda_melanoleuca
ENSIPUG00000021822	trit1	83	71.000	ENSACIG00000017409	trit1	99	64.905	Amphilophus_citrinellus
ENSIPUG00000021822	trit1	96	66.737	ENSAOCG00000009850	trit1	98	66.737	Amphiprion_ocellaris
ENSIPUG00000021822	trit1	96	66.949	ENSAPEG00000001481	trit1	98	66.949	Amphiprion_percula
ENSIPUG00000021822	trit1	88	71.163	ENSATEG00000005426	trit1	89	71.663	Anabas_testudineus
ENSIPUG00000021822	trit1	77	52.647	ENSAPLG00000011421	TRIT1	97	52.647	Anas_platyrhynchos
ENSIPUG00000021822	trit1	89	58.565	ENSACAG00000002280	TRIT1	85	58.565	Anolis_carolinensis
ENSIPUG00000021822	trit1	93	60.802	ENSANAG00000030732	TRIT1	99	58.312	Aotus_nancymaae
ENSIPUG00000021822	trit1	97	66.454	ENSACLG00000004920	trit1	99	66.454	Astatotilapia_calliptera
ENSIPUG00000021822	trit1	93	77.506	ENSAMXG00000010959	trit1	99	77.506	Astyanax_mexicanus
ENSIPUG00000021822	trit1	84	66.259	ENSBTAG00000013832	TRIT1	92	63.889	Bos_taurus
ENSIPUG00000021822	trit1	82	37.956	WBGene00001740	gro-1	95	38.785	Caenorhabditis_elegans
ENSIPUG00000021822	trit1	93	60.802	ENSCJAG00000002620	TRIT1	94	60.802	Callithrix_jacchus
ENSIPUG00000021822	trit1	85	63.835	ENSCAFG00000003048	TRIT1	92	62.125	Canis_familiaris
ENSIPUG00000021822	trit1	85	62.118	ENSCAFG00020003875	TRIT1	97	62.254	Canis_lupus_dingo
ENSIPUG00000021822	trit1	87	63.443	ENSCHIG00000013259	TRIT1	88	63.443	Capra_hircus
ENSIPUG00000021822	trit1	87	63.810	ENSTSYG00000004363	TRIT1	88	63.810	Carlito_syrichta
ENSIPUG00000021822	trit1	88	54.167	ENSCAPG00000017001	TRIT1	95	54.617	Cavia_aperea
ENSIPUG00000021822	trit1	87	62.619	ENSCPOG00000012820	TRIT1	88	62.619	Cavia_porcellus
ENSIPUG00000021822	trit1	84	64.059	ENSCCAG00000031271	TRIT1	94	63.687	Cebus_capucinus
ENSIPUG00000021822	trit1	86	61.307	ENSCATG00000034344	TRIT1	92	64.264	Cercocebus_atys
ENSIPUG00000021822	trit1	88	61.176	ENSCLAG00000009828	TRIT1	88	62.053	Chinchilla_lanigera
ENSIPUG00000021822	trit1	78	62.963	ENSCSAG00000001137	TRIT1	91	62.963	Chlorocebus_sabaeus
ENSIPUG00000021822	trit1	87	63.744	ENSCHOG00000000435	TRIT1	88	64.048	Choloepus_hoffmanni
ENSIPUG00000021822	trit1	84	45.433	ENSCSAVG00000002050	-	91	45.433	Ciona_savignyi
ENSIPUG00000021822	trit1	95	59.870	ENSCANG00000043008	TRIT1	92	63.964	Colobus_angolensis_palliatus
ENSIPUG00000021822	trit1	87	63.357	ENSCGRG00001001894	Trit1	88	63.658	Cricetulus_griseus_chok1gshd
ENSIPUG00000021822	trit1	82	60.759	ENSCGRG00000007059	Trit1	87	60.759	Cricetulus_griseus_crigri
ENSIPUG00000021822	trit1	85	70.602	ENSCSEG00000009574	trit1	92	69.746	Cynoglossus_semilaevis
ENSIPUG00000021822	trit1	91	71.715	ENSDARG00000032876	trit1	99	75.375	Danio_rerio
ENSIPUG00000021822	trit1	95	62.701	ENSDNOG00000001994	TRIT1	96	52.571	Dasypus_novemcinctus
ENSIPUG00000021822	trit1	87	55.765	ENSDORG00000012449	Trit1	91	55.765	Dipodomys_ordii
ENSIPUG00000021822	trit1	85	40.181	FBgn0043799	CG31381	91	40.181	Drosophila_melanogaster
ENSIPUG00000021822	trit1	84	61.631	ENSETEG00000008733	TRIT1	96	61.631	Echinops_telfairi
ENSIPUG00000021822	trit1	84	55.340	ENSEBUG00000012845	trit1	91	55.340	Eptatretus_burgeri
ENSIPUG00000021822	trit1	51	53.153	ENSEASG00005000884	-	99	53.153	Equus_asinus_asinus
ENSIPUG00000021822	trit1	93	59.081	ENSECAG00000010597	TRIT1	92	57.292	Equus_caballus
ENSIPUG00000021822	trit1	69	59.118	ENSEEUG00000009269	TRIT1	75	57.500	Erinaceus_europaeus
ENSIPUG00000021822	trit1	90	63.387	ENSELUG00000017278	trit1	91	63.387	Esox_lucius
ENSIPUG00000021822	trit1	96	59.483	ENSFCAG00000006029	TRIT1	96	59.483	Felis_catus
ENSIPUG00000021822	trit1	78	61.273	ENSFALG00000000532	TRIT1	94	61.273	Ficedula_albicollis
ENSIPUG00000021822	trit1	87	60.648	ENSFDAG00000003098	TRIT1	93	60.648	Fukomys_damarensis
ENSIPUG00000021822	trit1	69	63.174	ENSFHEG00000022274	trit1	99	63.174	Fundulus_heteroclitus
ENSIPUG00000021822	trit1	88	71.230	ENSGMOG00000006522	trit1	100	71.230	Gadus_morhua
ENSIPUG00000021822	trit1	87	62.201	ENSGALG00000003851	TRIT1	91	62.201	Gallus_gallus
ENSIPUG00000021822	trit1	73	67.514	ENSGAFG00000018636	trit1	96	68.362	Gambusia_affinis
ENSIPUG00000021822	trit1	89	69.585	ENSGACG00000008493	trit1	99	69.585	Gasterosteus_aculeatus
ENSIPUG00000021822	trit1	77	62.097	ENSGAGG00000000522	TRIT1	92	62.097	Gopherus_agassizii
ENSIPUG00000021822	trit1	95	60.304	ENSGGOG00000010070	TRIT1	96	60.304	Gorilla_gorilla
ENSIPUG00000021822	trit1	97	67.234	ENSHBUG00000018999	trit1	98	67.234	Haplochromis_burtoni
ENSIPUG00000021822	trit1	84	57.248	ENSHGLG00000009564	-	87	57.248	Heterocephalus_glaber_female
ENSIPUG00000021822	trit1	84	63.971	ENSHGLG00000010308	-	87	63.971	Heterocephalus_glaber_female
ENSIPUG00000021822	trit1	76	47.139	ENSHGLG00100018159	-	94	47.139	Heterocephalus_glaber_male
ENSIPUG00000021822	trit1	84	63.971	ENSHGLG00100015382	-	88	63.971	Heterocephalus_glaber_male
ENSIPUG00000021822	trit1	84	70.983	ENSHCOG00000006755	trit1	84	70.330	Hippocampus_comes
ENSIPUG00000021822	trit1	87	63.357	ENSSTOG00000006446	TRIT1	86	63.658	Ictidomys_tridecemlineatus
ENSIPUG00000021822	trit1	93	56.570	ENSJJAG00000000316	-	98	56.570	Jaculus_jaculus
ENSIPUG00000021822	trit1	95	53.564	ENSJJAG00000000300	-	99	52.941	Jaculus_jaculus
ENSIPUG00000021822	trit1	96	65.733	ENSKMAG00000021788	trit1	94	65.733	Kryptolebias_marmoratus
ENSIPUG00000021822	trit1	91	71.106	ENSLBEG00000024262	trit1	92	71.106	Labrus_bergylta
ENSIPUG00000021822	trit1	89	65.207	ENSLACG00000013861	TRIT1	88	65.207	Latimeria_chalumnae
ENSIPUG00000021822	trit1	95	69.165	ENSLOCG00000002057	trit1	97	69.165	Lepisosteus_oculatus
ENSIPUG00000021822	trit1	87	61.575	ENSLAFG00000016876	TRIT1	88	61.575	Loxodonta_africana
ENSIPUG00000021822	trit1	87	63.658	ENSMFAG00000001316	TRIT1	92	64.264	Macaca_fascicularis
ENSIPUG00000021822	trit1	87	63.658	ENSMMUG00000016220	TRIT1	92	64.264	Macaca_mulatta
ENSIPUG00000021822	trit1	87	63.658	ENSMNEG00000023137	TRIT1	92	64.264	Macaca_nemestrina
ENSIPUG00000021822	trit1	87	63.420	ENSMLEG00000035296	TRIT1	92	64.264	Mandrillus_leucophaeus
ENSIPUG00000021822	trit1	85	68.675	ENSMAMG00000005868	trit1	97	63.421	Mastacembelus_armatus
ENSIPUG00000021822	trit1	97	66.242	ENSMZEG00005011506	trit1	99	66.242	Maylandia_zebra
ENSIPUG00000021822	trit1	77	60.858	ENSMGAG00000005516	TRIT1	99	60.858	Meleagris_gallopavo
ENSIPUG00000021822	trit1	95	59.442	ENSMAUG00000000399	Trit1	96	59.442	Mesocricetus_auratus
ENSIPUG00000021822	trit1	93	60.310	ENSMICG00000016294	TRIT1	99	58.562	Microcebus_murinus
ENSIPUG00000021822	trit1	87	63.183	ENSMOCG00000008173	Trit1	88	63.183	Microtus_ochrogaster
ENSIPUG00000021822	trit1	81	66.071	ENSMMOG00000021140	trit1	90	66.071	Mola_mola
ENSIPUG00000021822	trit1	85	62.053	ENSMODG00000017650	TRIT1	91	62.053	Monodelphis_domestica
ENSIPUG00000021822	trit1	90	66.820	ENSMALG00000017843	trit1	92	66.743	Monopterus_albus
ENSIPUG00000021822	trit1	90	62.700	MGP_CAROLIEiJ_G0026428	Trit1	91	62.700	Mus_caroli
ENSIPUG00000021822	trit1	90	62.929	ENSMUSG00000028653	Trit1	91	62.929	Mus_musculus
ENSIPUG00000021822	trit1	87	64.371	MGP_PahariEiJ_G0028758	Trit1	88	64.371	Mus_pahari
ENSIPUG00000021822	trit1	90	62.700	MGP_SPRETEiJ_G0027408	Trit1	91	62.700	Mus_spretus
ENSIPUG00000021822	trit1	93	60.044	ENSMPUG00000014291	TRIT1	100	58.403	Mustela_putorius_furo
ENSIPUG00000021822	trit1	87	61.702	ENSMLUG00000000334	TRIT1	88	61.995	Myotis_lucifugus
ENSIPUG00000021822	trit1	95	60.521	ENSNLEG00000012038	TRIT1	92	64.865	Nomascus_leucogenys
ENSIPUG00000021822	trit1	85	55.746	ENSMEUG00000005217	TRIT1	87	56.020	Notamacropus_eugenii
ENSIPUG00000021822	trit1	60	56.287	ENSOPRG00000003205	-	68	53.646	Ochotona_princeps
ENSIPUG00000021822	trit1	88	60.187	ENSODEG00000006117	TRIT1	89	60.187	Octodon_degus
ENSIPUG00000021822	trit1	95	66.738	ENSONIG00000015407	trit1	97	66.738	Oreochromis_niloticus
ENSIPUG00000021822	trit1	77	59.894	ENSOANG00000002779	TRIT1	94	59.894	Ornithorhynchus_anatinus
ENSIPUG00000021822	trit1	95	60.217	ENSOCUG00000002054	TRIT1	96	60.217	Oryctolagus_cuniculus
ENSIPUG00000021822	trit1	91	68.100	ENSORLG00000005802	trit1	95	68.100	Oryzias_latipes
ENSIPUG00000021822	trit1	95	66.739	ENSORLG00020005519	trit1	99	66.739	Oryzias_latipes_hni
ENSIPUG00000021822	trit1	91	68.326	ENSORLG00015018715	trit1	99	66.739	Oryzias_latipes_hsok
ENSIPUG00000021822	trit1	89	68.998	ENSOMEG00000006569	trit1	94	68.100	Oryzias_melastigma
ENSIPUG00000021822	trit1	88	62.061	ENSOGAG00000009571	TRIT1	93	61.187	Otolemur_garnettii
ENSIPUG00000021822	trit1	87	65.166	ENSOARG00000020140	TRIT1	88	65.166	Ovis_aries
ENSIPUG00000021822	trit1	95	60.304	ENSPPAG00000023930	TRIT1	92	64.865	Pan_paniscus
ENSIPUG00000021822	trit1	87	62.884	ENSPPRG00000009680	TRIT1	88	63.183	Panthera_pardus
ENSIPUG00000021822	trit1	87	62.884	ENSPTIG00000021134	TRIT1	88	63.183	Panthera_tigris_altaica
ENSIPUG00000021822	trit1	95	60.304	ENSPTRG00000000579	TRIT1	92	64.865	Pan_troglodytes
ENSIPUG00000021822	trit1	87	63.121	ENSPANG00000018125	TRIT1	92	63.964	Papio_anubis
ENSIPUG00000021822	trit1	79	65.879	ENSPKIG00000024527	trit1	97	65.879	Paramormyrops_kingsleyae
ENSIPUG00000021822	trit1	75	46.814	ENSPSIG00000017073	TRIT1	99	46.814	Pelodiscus_sinensis
ENSIPUG00000021822	trit1	79	69.531	ENSPMGG00000018445	trit1	93	69.531	Periophthalmus_magnuspinnatus
ENSIPUG00000021822	trit1	95	59.227	ENSPEMG00000022418	Trit1	96	59.227	Peromyscus_maniculatus_bairdii
ENSIPUG00000021822	trit1	78	56.883	ENSPMAG00000008892	trit1	96	56.883	Petromyzon_marinus
ENSIPUG00000021822	trit1	85	62.319	ENSPCIG00000020666	TRIT1	91	65.409	Phascolarctos_cinereus
ENSIPUG00000021822	trit1	91	68.233	ENSPFOG00000014626	trit1	93	68.233	Poecilia_formosa
ENSIPUG00000021822	trit1	69	70.871	ENSPLAG00000011669	trit1	97	70.871	Poecilia_latipinna
ENSIPUG00000021822	trit1	57	68.605	ENSPMEG00000023788	trit1	93	68.605	Poecilia_mexicana
ENSIPUG00000021822	trit1	69	70.270	ENSPREG00000018182	trit1	93	70.270	Poecilia_reticulata
ENSIPUG00000021822	trit1	95	60.304	ENSPPYG00000001499	TRIT1	96	60.304	Pongo_abelii
ENSIPUG00000021822	trit1	75	51.385	ENSPCAG00000014680	TRIT1	89	51.385	Procavia_capensis
ENSIPUG00000021822	trit1	93	61.283	ENSPCOG00000014150	TRIT1	94	61.283	Propithecus_coquereli
ENSIPUG00000021822	trit1	87	55.819	ENSPVAG00000003344	TRIT1	88	56.086	Pteropus_vampyrus
ENSIPUG00000021822	trit1	67	70.550	ENSPNYG00000001003	trit1	100	70.550	Pundamilia_nyererei
ENSIPUG00000021822	trit1	94	78.808	ENSPNAG00000009466	trit1	93	81.622	Pygocentrus_nattereri
ENSIPUG00000021822	trit1	93	58.963	ENSRNOG00000014274	Trit1	95	58.963	Rattus_norvegicus
ENSIPUG00000021822	trit1	89	62.587	ENSRBIG00000043179	TRIT1	92	63.964	Rhinopithecus_bieti
ENSIPUG00000021822	trit1	89	62.587	ENSRROG00000042670	TRIT1	92	63.964	Rhinopithecus_roxellana
ENSIPUG00000021822	trit1	84	32.944	YOR274W	-	93	32.944	Saccharomyces_cerevisiae
ENSIPUG00000021822	trit1	84	64.059	ENSSBOG00000024417	TRIT1	90	65.831	Saimiri_boliviensis_boliviensis
ENSIPUG00000021822	trit1	79	59.021	ENSSHAG00000018363	TRIT1	91	59.021	Sarcophilus_harrisii
ENSIPUG00000021822	trit1	96	67.245	ENSSFOG00015007284	trit1	88	67.245	Scleropages_formosus
ENSIPUG00000021822	trit1	90	70.642	ENSSMAG00000020730	trit1	92	70.642	Scophthalmus_maximus
ENSIPUG00000021822	trit1	95	67.826	ENSSDUG00000001683	trit1	95	67.826	Seriola_dumerili
ENSIPUG00000021822	trit1	95	67.100	ENSSLDG00000008379	trit1	95	67.100	Seriola_lalandi_dorsalis
ENSIPUG00000021822	trit1	86	61.737	ENSSARG00000004540	TRIT1	93	60.682	Sorex_araneus
ENSIPUG00000021822	trit1	78	62.299	ENSSPUG00000003472	TRIT1	76	62.299	Sphenodon_punctatus
ENSIPUG00000021822	trit1	85	71.776	ENSSPAG00000020745	trit1	91	71.776	Stegastes_partitus
ENSIPUG00000021822	trit1	78	58.466	ENSTGUG00000001242	TRIT1	100	58.466	Taeniopygia_guttata
ENSIPUG00000021822	trit1	94	65.714	ENSTRUG00000013936	trit1	98	66.441	Takifugu_rubripes
ENSIPUG00000021822	trit1	90	68.421	ENSTNIG00000009240	trit1	96	68.421	Tetraodon_nigroviridis
ENSIPUG00000021822	trit1	67	78.313	ENSTBEG00000001317	TRIT1	73	66.981	Tupaia_belangeri
ENSIPUG00000021822	trit1	87	63.830	ENSTTRG00000005064	TRIT1	88	64.133	Tursiops_truncatus
ENSIPUG00000021822	trit1	55	63.889	ENSUAMG00000000522	-	91	67.901	Ursus_americanus
ENSIPUG00000021822	trit1	93	60.841	ENSUMAG00000017299	TRIT1	86	60.841	Ursus_maritimus
ENSIPUG00000021822	trit1	87	58.670	ENSVPAG00000003008	TRIT1	88	58.950	Vicugna_pacos
ENSIPUG00000021822	trit1	89	60.920	ENSXETG00000010952	trit1	93	60.920	Xenopus_tropicalis
ENSIPUG00000021822	trit1	69	70.448	ENSXMAG00000016302	trit1	91	70.448	Xiphophorus_maculatus