EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000021878 (Gene tree)
Gene ID: 108258481
Gene Symbol: zc3h13
Alias: zgc:66359
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 18185 bases
Position: chr26:12724301-12742485
Accession: 108258481
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000032568	zf-CCCH	PF00642.24	1.3e-06	1	1
ENSIPUP00000032545	zf-CCCH	PF00642.24	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000033831	-	5597	XM_017457135	ENSIPUP00000032545	1749 (aa)	XP_017312624	-
ENSIPUT00000033855	-	5552	XM_017457136	ENSIPUP00000032568	1734 (aa)	XP_017312625	-

Gene Model

Click here to download ENSIPUG00000021878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000021878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000021878	zc3h13	50	55.652	ENSCSEG00000010275	zc3h13	50	54.585	Cynoglossus_semilaevis
ENSIPUG00000021878	zc3h13	70	63.889	ENSGACG00000015166	zc3h13	67	75.330	Gasterosteus_aculeatus
ENSIPUG00000021878	zc3h13	50	54.842	ENSORLG00000005201	zc3h13	51	53.533	Oryzias_latipes
ENSIPUG00000021878	zc3h13	50	55.136	ENSORLG00020016576	zc3h13	51	54.350	Oryzias_latipes_hni
ENSIPUG00000021878	zc3h13	50	54.890	ENSORLG00015014966	zc3h13	51	53.739	Oryzias_latipes_hsok
ENSIPUG00000021878	zc3h13	60	87.685	ENSPKIG00000019756	zc3h13	68	84.729	Paramormyrops_kingsleyae
ENSIPUG00000021878	zc3h13	64	73.733	ENSPCAG00000001146	ZC3H13	74	70.042	Procavia_capensis
ENSIPUG00000021878	zc3h13	50	74.227	ENSPVAG00000012353	ZC3H13	56	72.195	Pteropus_vampyrus
ENSIPUG00000021878	zc3h13	63	54.493	ENSTNIG00000014523	zc3h13	63	75.107	Tetraodon_nigroviridis