EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000021952 (Gene tree)
Gene ID: 108270724
Gene Symbol: rbm34
Alias: zgc:92062
Full Name: RNA binding motif protein 34
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 10243 bases
Position: chr10:7699460-7709702
Accession: 108270724
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000032673	RRM_1	PF00076.22	7.4e-28	1	2
ENSIPUP00000032673	RRM_1	PF00076.22	7.4e-28	2	2
ENSIPUP00000032694	RRM_1	PF00076.22	4.8e-22	1	2
ENSIPUP00000032694	RRM_1	PF00076.22	4.8e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000033986	-	1278	-	ENSIPUP00000032694	425 (aa)	-	-
ENSIPUT00000033964	-	3576	XM_017477576	ENSIPUP00000032673	434 (aa)	XP_017333065	A0A2D0RSY0

Gene Model

Click here to download ENSIPUG00000021952's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000021952's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000021952	rbm34	74	46.199	ENSG00000188739	RBM34	76	46.341	Homo_sapiens
ENSIPUG00000021952	rbm34	91	51.385	ENSAPOG00000004027	rbm34	93	51.256	Acanthochromis_polyacanthus
ENSIPUG00000021952	rbm34	92	44.307	ENSACIG00000014842	rbm34	87	46.005	Amphilophus_citrinellus
ENSIPUG00000021952	rbm34	95	51.537	ENSAOCG00000006146	rbm34	95	51.773	Amphiprion_ocellaris
ENSIPUG00000021952	rbm34	95	51.408	ENSAPEG00000022105	rbm34	95	51.174	Amphiprion_percula
ENSIPUG00000021952	rbm34	91	52.463	ENSATEG00000016567	rbm34	95	51.807	Anabas_testudineus
ENSIPUG00000021952	rbm34	59	53.668	ENSAPLG00000004344	RBM34	80	53.175	Anas_platyrhynchos
ENSIPUG00000021952	rbm34	78	43.490	ENSACAG00000001253	RBM34	80	43.353	Anolis_carolinensis
ENSIPUG00000021952	rbm34	74	44.321	ENSANAG00000029971	RBM34	77	43.642	Aotus_nancymaae
ENSIPUG00000021952	rbm34	92	51.225	ENSACLG00000018471	rbm34	81	51.225	Astatotilapia_calliptera
ENSIPUG00000021952	rbm34	92	51.225	ENSACLG00000026337	rbm34	93	51.225	Astatotilapia_calliptera
ENSIPUG00000021952	rbm34	95	62.143	ENSAMXG00000021328	rbm34	96	62.295	Astyanax_mexicanus
ENSIPUG00000021952	rbm34	74	47.353	ENSCJAG00000018125	RBM34	76	46.646	Callithrix_jacchus
ENSIPUG00000021952	rbm34	74	43.824	ENSCAFG00000011507	RBM34	90	41.479	Canis_familiaris
ENSIPUG00000021952	rbm34	75	46.857	ENSTSYG00000009942	RBM34	76	46.386	Carlito_syrichta
ENSIPUG00000021952	rbm34	60	43.728	ENSCAPG00000015346	RBM34	71	43.922	Cavia_aperea
ENSIPUG00000021952	rbm34	75	46.398	ENSCPOG00000015213	RBM34	76	46.386	Cavia_porcellus
ENSIPUG00000021952	rbm34	76	46.974	ENSCCAG00000025584	RBM34	77	46.386	Cebus_capucinus
ENSIPUG00000021952	rbm34	74	46.199	ENSCATG00000031771	RBM34	77	46.341	Cercocebus_atys
ENSIPUG00000021952	rbm34	75	45.748	ENSCLAG00000003464	RBM34	76	45.820	Chinchilla_lanigera
ENSIPUG00000021952	rbm34	75	45.507	ENSCSAG00000010079	RBM34	76	46.037	Chlorocebus_sabaeus
ENSIPUG00000021952	rbm34	77	44.538	ENSCPBG00000005460	RBM34	71	44.277	Chrysemys_picta_bellii
ENSIPUG00000021952	rbm34	74	46.784	ENSCANG00000009561	RBM34	76	46.037	Colobus_angolensis_palliatus
ENSIPUG00000021952	rbm34	93	33.333	ENSCGRG00001018721	Rbm34	89	41.339	Cricetulus_griseus_chok1gshd
ENSIPUG00000021952	rbm34	93	36.667	ENSCGRG00000014051	Rbm34	91	35.422	Cricetulus_griseus_crigri
ENSIPUG00000021952	rbm34	95	50.236	ENSCSEG00000000993	rbm34	94	50.118	Cynoglossus_semilaevis
ENSIPUG00000021952	rbm34	91	46.782	ENSCVAG00000018699	rbm34	78	51.863	Cyprinodon_variegatus
ENSIPUG00000021952	rbm34	93	54.950	ENSDARG00000101877	rbm34	98	56.997	Danio_rerio
ENSIPUG00000021952	rbm34	74	45.930	ENSDNOG00000044740	RBM34	76	45.758	Dasypus_novemcinctus
ENSIPUG00000021952	rbm34	55	53.600	ENSDORG00000006420	Rbm34	77	53.361	Dipodomys_ordii
ENSIPUG00000021952	rbm34	58	45.490	ENSEBUG00000012070	rbm34	68	46.091	Eptatretus_burgeri
ENSIPUG00000021952	rbm34	75	37.941	ENSEEUG00000012760	RBM34	76	37.152	Erinaceus_europaeus
ENSIPUG00000021952	rbm34	91	53.333	ENSELUG00000015682	rbm34	93	54.118	Esox_lucius
ENSIPUG00000021952	rbm34	74	46.608	ENSFCAG00000001852	RBM34	76	46.037	Felis_catus
ENSIPUG00000021952	rbm34	66	52.218	ENSFHEG00000010140	rbm34	97	52.721	Fundulus_heteroclitus
ENSIPUG00000021952	rbm34	51	51.802	ENSGMOG00000011683	rbm34	87	51.802	Gadus_morhua
ENSIPUG00000021952	rbm34	84	50.806	ENSGAFG00000017798	rbm34	91	50.392	Gambusia_affinis
ENSIPUG00000021952	rbm34	90	47.704	ENSGACG00000001040	-	96	47.229	Gasterosteus_aculeatus
ENSIPUG00000021952	rbm34	77	43.626	ENSGAGG00000020598	RBM34	77	45.427	Gopherus_agassizii
ENSIPUG00000021952	rbm34	74	46.784	ENSGGOG00000007924	RBM34	76	46.951	Gorilla_gorilla
ENSIPUG00000021952	rbm34	92	51.471	ENSHBUG00000015508	rbm34	93	51.471	Haplochromis_burtoni
ENSIPUG00000021952	rbm34	77	45.455	ENSHGLG00000016495	RBM34	78	45.509	Heterocephalus_glaber_female
ENSIPUG00000021952	rbm34	77	45.455	ENSHGLG00100014678	RBM34	78	45.509	Heterocephalus_glaber_male
ENSIPUG00000021952	rbm34	52	55.365	ENSHCOG00000010393	rbm34	78	46.023	Hippocampus_comes
ENSIPUG00000021952	rbm34	80	46.070	ENSSTOG00000002792	RBM34	81	45.584	Ictidomys_tridecemlineatus
ENSIPUG00000021952	rbm34	56	53.906	ENSJJAG00000021295	Rbm34	77	53.306	Jaculus_jaculus
ENSIPUG00000021952	rbm34	95	46.651	ENSKMAG00000007790	rbm34	96	44.498	Kryptolebias_marmoratus
ENSIPUG00000021952	rbm34	71	48.397	ENSLBEG00000028305	rbm34	90	42.929	Labrus_bergylta
ENSIPUG00000021952	rbm34	90	51.741	ENSLBEG00000022530	-	92	52.109	Labrus_bergylta
ENSIPUG00000021952	rbm34	76	45.787	ENSLACG00000013628	RBM34	82	44.225	Latimeria_chalumnae
ENSIPUG00000021952	rbm34	95	51.294	ENSLOCG00000015902	rbm34	95	51.294	Lepisosteus_oculatus
ENSIPUG00000021952	rbm34	78	46.154	ENSLAFG00000014289	RBM34	76	46.429	Loxodonta_africana
ENSIPUG00000021952	rbm34	74	46.199	ENSMFAG00000038522	RBM34	77	46.341	Macaca_fascicularis
ENSIPUG00000021952	rbm34	74	46.199	ENSMMUG00000039424	RBM34	80	46.341	Macaca_mulatta
ENSIPUG00000021952	rbm34	74	46.199	ENSMNEG00000040149	RBM34	77	46.341	Macaca_nemestrina
ENSIPUG00000021952	rbm34	95	51.190	ENSMAMG00000018828	rbm34	95	51.179	Mastacembelus_armatus
ENSIPUG00000021952	rbm34	92	51.225	ENSMZEG00005021586	rbm34	93	51.225	Maylandia_zebra
ENSIPUG00000021952	rbm34	62	52.555	ENSMZEG00005010091	-	91	52.555	Maylandia_zebra
ENSIPUG00000021952	rbm34	77	46.418	ENSMGAG00000011921	RBM34	82	47.059	Meleagris_gallopavo
ENSIPUG00000021952	rbm34	78	44.023	ENSMICG00000038704	-	76	44.099	Microcebus_murinus
ENSIPUG00000021952	rbm34	74	47.801	ENSMOCG00000013550	Rbm34	77	47.112	Microtus_ochrogaster
ENSIPUG00000021952	rbm34	87	52.455	ENSMMOG00000018675	rbm34	89	52.455	Mola_mola
ENSIPUG00000021952	rbm34	75	43.059	ENSMODG00000008436	RBM34	78	42.105	Monodelphis_domestica
ENSIPUG00000021952	rbm34	90	46.898	ENSMALG00000007816	rbm34	95	44.828	Monopterus_albus
ENSIPUG00000021952	rbm34	76	45.682	MGP_CAROLIEiJ_G0031732	Rbm34	78	45.455	Mus_caroli
ENSIPUG00000021952	rbm34	74	46.286	ENSMUSG00000033931	Rbm34	75	45.509	Mus_musculus
ENSIPUG00000021952	rbm34	75	46.839	MGP_PahariEiJ_G0023329	Rbm34	76	46.364	Mus_pahari
ENSIPUG00000021952	rbm34	76	45.506	MGP_SPRETEiJ_G0032849	Rbm34	76	45.266	Mus_spretus
ENSIPUG00000021952	rbm34	74	45.882	ENSMPUG00000002849	RBM34	76	44.985	Mustela_putorius_furo
ENSIPUG00000021952	rbm34	74	45.845	ENSMLUG00000016224	RBM34	77	45.697	Myotis_lucifugus
ENSIPUG00000021952	rbm34	78	45.658	ENSNGAG00000010712	Rbm34	77	47.095	Nannospalax_galili
ENSIPUG00000021952	rbm34	92	47.816	ENSNBRG00000010975	rbm34	95	47.608	Neolamprologus_brichardi
ENSIPUG00000021952	rbm34	74	45.906	ENSNLEG00000002610	RBM34	76	45.732	Nomascus_leucogenys
ENSIPUG00000021952	rbm34	66	43.206	ENSMEUG00000005465	-	95	39.458	Notamacropus_eugenii
ENSIPUG00000021952	rbm34	71	38.889	ENSOPRG00000013930	RBM34	76	36.637	Ochotona_princeps
ENSIPUG00000021952	rbm34	74	46.939	ENSODEG00000006130	RBM34	84	46.224	Octodon_degus
ENSIPUG00000021952	rbm34	92	51.351	ENSONIG00000018121	rbm34	91	51.351	Oreochromis_niloticus
ENSIPUG00000021952	rbm34	74	45.217	ENSOANG00000001206	RBM34	77	44.848	Ornithorhynchus_anatinus
ENSIPUG00000021952	rbm34	85	43.434	ENSOCUG00000009173	RBM34	77	45.373	Oryctolagus_cuniculus
ENSIPUG00000021952	rbm34	90	50.995	ENSORLG00000001221	rbm34	91	51.358	Oryzias_latipes
ENSIPUG00000021952	rbm34	90	50.868	ENSORLG00020016678	rbm34	91	51.232	Oryzias_latipes_hni
ENSIPUG00000021952	rbm34	90	50.374	ENSORLG00015016039	rbm34	91	50.995	Oryzias_latipes_hsok
ENSIPUG00000021952	rbm34	91	49.020	ENSOMEG00000007902	rbm34	93	48.905	Oryzias_melastigma
ENSIPUG00000021952	rbm34	82	42.597	ENSOGAG00000012470	RBM34	76	45.104	Otolemur_garnettii
ENSIPUG00000021952	rbm34	74	45.190	ENSPPAG00000030692	RBM34	76	44.681	Pan_paniscus
ENSIPUG00000021952	rbm34	74	47.198	ENSPPRG00000013597	RBM34	76	46.341	Panthera_pardus
ENSIPUG00000021952	rbm34	74	46.903	ENSPTIG00000011612	RBM34	76	46.037	Panthera_tigris_altaica
ENSIPUG00000021952	rbm34	74	46.491	ENSPTRG00000032432	RBM34	76	46.646	Pan_troglodytes
ENSIPUG00000021952	rbm34	74	46.491	ENSPTRG00000048646	-	76	46.646	Pan_troglodytes
ENSIPUG00000021952	rbm34	74	46.199	ENSPANG00000010411	RBM34	76	46.341	Papio_anubis
ENSIPUG00000021952	rbm34	90	55.062	ENSPKIG00000009284	rbm34	92	55.122	Paramormyrops_kingsleyae
ENSIPUG00000021952	rbm34	75	42.135	ENSPSIG00000011370	RBM34	75	42.857	Pelodiscus_sinensis
ENSIPUG00000021952	rbm34	74	43.519	ENSPMGG00000001183	rbm34	78	43.464	Periophthalmus_magnuspinnatus
ENSIPUG00000021952	rbm34	74	46.398	ENSPEMG00000000265	Rbm34	77	45.427	Peromyscus_maniculatus_bairdii
ENSIPUG00000021952	rbm34	80	44.865	ENSPMAG00000001602	rbm34	89	45.634	Petromyzon_marinus
ENSIPUG00000021952	rbm34	95	39.140	ENSPCIG00000029736	-	80	37.808	Phascolarctos_cinereus
ENSIPUG00000021952	rbm34	91	49.377	ENSPFOG00000009829	-	92	50.649	Poecilia_formosa
ENSIPUG00000021952	rbm34	82	51.791	ENSPLAG00000018385	-	91	50.909	Poecilia_latipinna
ENSIPUG00000021952	rbm34	83	45.924	ENSPMEG00000014440	-	91	45.144	Poecilia_mexicana
ENSIPUG00000021952	rbm34	85	50.526	ENSPREG00000023227	rbm34	92	49.741	Poecilia_reticulata
ENSIPUG00000021952	rbm34	74	45.614	ENSPPYG00000029513	RBM34	76	45.732	Pongo_abelii
ENSIPUG00000021952	rbm34	78	44.258	ENSPCOG00000018448	RBM34	75	45.732	Propithecus_coquereli
ENSIPUG00000021952	rbm34	74	48.961	ENSPVAG00000015158	RBM34	77	48.318	Pteropus_vampyrus
ENSIPUG00000021952	rbm34	92	51.699	ENSPNYG00000004970	rbm34	93	51.471	Pundamilia_nyererei
ENSIPUG00000021952	rbm34	97	65.566	ENSPNAG00000002639	rbm34	97	66.667	Pygocentrus_nattereri
ENSIPUG00000021952	rbm34	74	47.661	ENSRNOG00000020004	Rbm34	76	46.951	Rattus_norvegicus
ENSIPUG00000021952	rbm34	74	46.491	ENSRBIG00000032900	RBM34	76	46.646	Rhinopithecus_bieti
ENSIPUG00000021952	rbm34	74	46.491	ENSRROG00000039131	RBM34	76	46.646	Rhinopithecus_roxellana
ENSIPUG00000021952	rbm34	78	42.179	ENSSHAG00000015812	RBM34	95	38.170	Sarcophilus_harrisii
ENSIPUG00000021952	rbm34	77	53.448	ENSSFOG00015000148	rbm34	79	53.216	Scleropages_formosus
ENSIPUG00000021952	rbm34	95	50.935	ENSSMAG00000020955	rbm34	95	50.234	Scophthalmus_maximus
ENSIPUG00000021952	rbm34	95	49.188	ENSSDUG00000019237	rbm34	93	48.551	Seriola_dumerili
ENSIPUG00000021952	rbm34	95	48.585	ENSSLDG00000000796	rbm34	95	48.700	Seriola_lalandi_dorsalis
ENSIPUG00000021952	rbm34	78	44.134	ENSSPUG00000015430	RBM34	77	44.817	Sphenodon_punctatus
ENSIPUG00000021952	rbm34	91	50.739	ENSSPAG00000010174	rbm34	92	51.358	Stegastes_partitus
ENSIPUG00000021952	rbm34	94	44.365	ENSTRUG00000011172	rbm34	85	51.613	Takifugu_rubripes
ENSIPUG00000021952	rbm34	50	61.712	ENSTNIG00000001302	-	88	49.062	Tetraodon_nigroviridis
ENSIPUG00000021952	rbm34	76	48.830	ENSXETG00000023721	rbm34	77	49.080	Xenopus_tropicalis
ENSIPUG00000021952	rbm34	85	45.600	ENSXCOG00000011190	RBM34	92	44.737	Xiphophorus_couchianus
ENSIPUG00000021952	rbm34	84	52.139	ENSXMAG00000029852	rbm34	91	51.688	Xiphophorus_maculatus