EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000021966 (Gene tree)
Gene ID
-
Gene Symbol
rbfox3b
Alias
rbfox3l|si:ch73-322f21.1
Full Name
RNA binding fox-1 homolog 3b
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Minus strand
Length
94240 bases
Position
chr12:25570608-25664847
Accession
ZDB-GENE-091204-46
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000032692Fox-1_CPF12414.81.4e-2611
ENSIPUP00000032702Fox-1_CPF12414.84.8e-1611
ENSIPUP00000032702RRM_1PF00076.229.3e-1911
ENSIPUP00000032692RRM_1PF00076.221.4e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000033994-1469-ENSIPUP00000032702262 (aa)--
ENSIPUT00000033983-984-ENSIPUP00000032692327 (aa)--
Gene Model
Click here to download ENSIPUG00000021966's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000021966's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000021966rbfox3b10077.007ENSIPUG00000012010rbfox3a9566.857
ENSIPUG00000021966rbfox3b8754.688ENSIPUG00000016896rbfox28954.579
ENSIPUG00000021966rbfox3b9769.380ENSIPUG00000015215rbfox18960.290
ENSIPUG00000021966rbfox3b8259.735ENSIPUG00000000065rbfox1l8848.563
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000021966rbfox3b8875.949ENSG00000167281RBFOX310065.988Homo_sapiens
ENSIPUG00000021966rbfox3b9363.052ENSAPOG00000015658-7861.168Acanthochromis_polyacanthus
ENSIPUG00000021966rbfox3b9885.985ENSAPOG00000021630rbfox3b8573.837Acanthochromis_polyacanthus
ENSIPUG00000021966rbfox3b9870.819ENSAMEG00000014170RBFOX38562.363Ailuropoda_melanoleuca
ENSIPUG00000021966rbfox3b9873.022ENSACIG00000003768-7872.202Amphilophus_citrinellus
ENSIPUG00000021966rbfox3b9485.375ENSACIG00000010817rbfox3b9973.414Amphilophus_citrinellus
ENSIPUG00000021966rbfox3b9885.985ENSAOCG00000012358rbfox3b8573.837Amphiprion_ocellaris
ENSIPUG00000021966rbfox3b9878.626ENSAOCG00000010786-8368.580Amphiprion_ocellaris
ENSIPUG00000021966rbfox3b9371.587ENSAPEG00000015891-8362.678Amphiprion_percula
ENSIPUG00000021966rbfox3b9285.200ENSAPEG00000019081rbfox3b7282.400Amphiprion_percula
ENSIPUG00000021966rbfox3b9385.714ENSATEG00000019945rbfox3b9972.989Anabas_testudineus
ENSIPUG00000021966rbfox3b8875.630ENSATEG00000023101-9763.429Anabas_testudineus
ENSIPUG00000021966rbfox3b9875.379ENSACAG00000016093RBFOX38766.087Anolis_carolinensis
ENSIPUG00000021966rbfox3b8875.105ENSANAG00000023457RBFOX310065.407Aotus_nancymaae
ENSIPUG00000021966rbfox3b9475.889ENSACLG00000025552-8667.052Astatotilapia_calliptera
ENSIPUG00000021966rbfox3b9886.207ENSACLG00000020011rbfox3b10072.754Astatotilapia_calliptera
ENSIPUG00000021966rbfox3b10077.372ENSAMXG00000037246rbfox3a9566.857Astyanax_mexicanus
ENSIPUG00000021966rbfox3b9887.925ENSAMXG00000042841rbfox3b8972.754Astyanax_mexicanus
ENSIPUG00000021966rbfox3b8876.371ENSBTAG00000006280RBFOX310055.710Bos_taurus
ENSIPUG00000021966rbfox3b9563.924ENSCJAG00000009563RBFOX310063.408Callithrix_jacchus
ENSIPUG00000021966rbfox3b6786.441ENSCAFG00000005547RBFOX38569.259Canis_familiaris
ENSIPUG00000021966rbfox3b8475.556ENSCAFG00020008126RBFOX39763.989Canis_lupus_dingo
ENSIPUG00000021966rbfox3b8875.949ENSCHIG00000009124RBFOX39763.989Capra_hircus
ENSIPUG00000021966rbfox3b8475.111ENSTSYG00000029617RBFOX310063.510Carlito_syrichta
ENSIPUG00000021966rbfox3b5670.130ENSCAPG00000010217RBFOX310072.189Cavia_aperea
ENSIPUG00000021966rbfox3b8475.221ENSCPOG00000021703RBFOX310064.088Cavia_porcellus
ENSIPUG00000021966rbfox3b8875.105ENSCCAG00000028450RBFOX310065.407Cebus_capucinus
ENSIPUG00000021966rbfox3b8875.949ENSCATG00000018349RBFOX310065.988Cercocebus_atys
ENSIPUG00000021966rbfox3b8474.779ENSCLAG00000006449RBFOX310064.167Chinchilla_lanigera
ENSIPUG00000021966rbfox3b8875.949ENSCSAG00000002355RBFOX310065.988Chlorocebus_sabaeus
ENSIPUG00000021966rbfox3b10078.731ENSCPBG00000010904RBFOX310068.129Chrysemys_picta_bellii
ENSIPUG00000021966rbfox3b8875.949ENSCANG00000043120RBFOX310065.988Colobus_angolensis_palliatus
ENSIPUG00000021966rbfox3b8474.336ENSCGRG00001019476Rbfox310062.881Cricetulus_griseus_chok1gshd
ENSIPUG00000021966rbfox3b8474.336ENSCGRG00000003268Rbfox310062.881Cricetulus_griseus_crigri
ENSIPUG00000021966rbfox3b9377.016ENSCSEG00000015567RBFOX37477.692Cynoglossus_semilaevis
ENSIPUG00000021966rbfox3b9769.549ENSCSEG00000020606RBFOX38761.094Cynoglossus_semilaevis
ENSIPUG00000021966rbfox3b9885.985ENSCVAG00000006882rbfox3b8573.837Cyprinodon_variegatus
ENSIPUG00000021966rbfox3b9382.661ENSDARG00000074310rbfox3b10076.214Danio_rerio
ENSIPUG00000021966rbfox3b9877.985ENSDARG00000010083rbfox3a9667.714Danio_rerio
ENSIPUG00000021966rbfox3b7077.540ENSDNOG00000039391RBFOX39654.918Dasypus_novemcinctus
ENSIPUG00000021966rbfox3b8464.444ENSDORG00000005352Rbfox310055.367Dipodomys_ordii
ENSIPUG00000021966rbfox3b9466.534ENSEBUG00000002129RBFOX39356.389Eptatretus_burgeri
ENSIPUG00000021966rbfox3b9755.636ENSEBUG00000013559RBFOX37850.649Eptatretus_burgeri
ENSIPUG00000021966rbfox3b8875.949ENSEASG00005005059RBFOX310065.318Equus_asinus_asinus
ENSIPUG00000021966rbfox3b8875.949ENSECAG00000023811RBFOX310065.318Equus_caballus
ENSIPUG00000021966rbfox3b7272.917ENSEEUG00000013974RBFOX37373.430Erinaceus_europaeus
ENSIPUG00000021966rbfox3b9884.674ENSELUG00000017963rbfox3b8483.333Esox_lucius
ENSIPUG00000021966rbfox3b7063.934ENSELUG00000009807-5459.113Esox_lucius
ENSIPUG00000021966rbfox3b9875.665ENSFCAG00000002555RBFOX310065.407Felis_catus
ENSIPUG00000021966rbfox3b8175.115ENSFALG00000012288RBFOX36676.214Ficedula_albicollis
ENSIPUG00000021966rbfox3b9557.955ENSFDAG00000007489RBFOX310059.392Fukomys_damarensis
ENSIPUG00000021966rbfox3b9473.123ENSFHEG00000008550rbfox3b10064.535Fundulus_heteroclitus
ENSIPUG00000021966rbfox3b9472.358ENSGMOG00000019304-9660.335Gadus_morhua
ENSIPUG00000021966rbfox3b9878.244ENSGALG00000032889RBFOX38767.347Gallus_gallus
ENSIPUG00000021966rbfox3b9881.818ENSGAFG00000005025rbfox3b8872.239Gambusia_affinis
ENSIPUG00000021966rbfox3b8874.583ENSGACG00000002138-9760.929Gasterosteus_aculeatus
ENSIPUG00000021966rbfox3b10078.731ENSGAGG00000020025RBFOX310068.421Gopherus_agassizii
ENSIPUG00000021966rbfox3b8875.949ENSGGOG00000012546RBFOX310065.988Gorilla_gorilla
ENSIPUG00000021966rbfox3b9475.889ENSHBUG00000023098-9167.241Haplochromis_burtoni
ENSIPUG00000021966rbfox3b9886.207ENSHBUG00000018099rbfox3b7286.207Haplochromis_burtoni
ENSIPUG00000021966rbfox3b8474.336ENSHGLG00000008679RBFOX310062.637Heterocephalus_glaber_female
ENSIPUG00000021966rbfox3b9560.340ENSHGLG00100014739RBFOX39760.929Heterocephalus_glaber_male
ENSIPUG00000021966rbfox3b8881.702ENSHCOG00000007444RBFOX38070.326Hippocampus_comes
ENSIPUG00000021966rbfox3b8975.732ENSHCOG00000001863RBFOX39362.952Hippocampus_comes
ENSIPUG00000021966rbfox3b9552.836ENSSTOG00000026817RBFOX310052.436Ictidomys_tridecemlineatus
ENSIPUG00000021966rbfox3b8475.664ENSJJAG00000014167Rbfox310064.345Jaculus_jaculus
ENSIPUG00000021966rbfox3b9885.985ENSKMAG00000006726rbfox3b8573.837Kryptolebias_marmoratus
ENSIPUG00000021966rbfox3b9877.652ENSLBEG00000022508-8667.919Labrus_bergylta
ENSIPUG00000021966rbfox3b9885.606ENSLBEG00000004030rbfox3b9973.414Labrus_bergylta
ENSIPUG00000021966rbfox3b5367.808ENSLACG00000000021-9560.870Latimeria_chalumnae
ENSIPUG00000021966rbfox3b9870.345ENSLACG00000018409-8761.905Latimeria_chalumnae
ENSIPUG00000021966rbfox3b10080.074ENSLOCG00000012267rbfox3a9568.876Lepisosteus_oculatus
ENSIPUG00000021966rbfox3b9867.698ENSLAFG00000016623RBFOX39763.989Loxodonta_africana
ENSIPUG00000021966rbfox3b9566.967ENSMFAG00000002247RBFOX39767.826Macaca_fascicularis
ENSIPUG00000021966rbfox3b8875.949ENSMMUG00000023028RBFOX310065.988Macaca_mulatta
ENSIPUG00000021966rbfox3b8875.949ENSMNEG00000041147RBFOX310065.698Macaca_nemestrina
ENSIPUG00000021966rbfox3b8875.949ENSMLEG00000025686RBFOX310065.988Mandrillus_leucophaeus
ENSIPUG00000021966rbfox3b9377.510ENSMAMG00000020600-9064.118Mastacembelus_armatus
ENSIPUG00000021966rbfox3b9385.246ENSMAMG00000019810rbfox3b9972.086Mastacembelus_armatus
ENSIPUG00000021966rbfox3b9264.260ENSMZEG00005003055-5486.290Maylandia_zebra
ENSIPUG00000021966rbfox3b9886.207ENSMZEG00005000781rbfox3b7286.207Maylandia_zebra
ENSIPUG00000021966rbfox3b8175.115ENSMGAG00000005600RBFOX38373.733Meleagris_gallopavo
ENSIPUG00000021966rbfox3b8473.568ENSMAUG00000013543Rbfox310063.158Mesocricetus_auratus
ENSIPUG00000021966rbfox3b9872.075ENSMICG00000014898RBFOX310064.723Microcebus_murinus
ENSIPUG00000021966rbfox3b8473.894ENSMOCG00000015373Rbfox310062.500Microtus_ochrogaster
ENSIPUG00000021966rbfox3b9885.932ENSMMOG00000020193rbfox3b8476.488Mola_mola
ENSIPUG00000021966rbfox3b9876.718ENSMODG00000002089RBFOX38766.764Monodelphis_domestica
ENSIPUG00000021966rbfox3b9883.712ENSMALG00000020407rbfox3b8573.837Monopterus_albus
ENSIPUG00000021966rbfox3b9876.515ENSMALG00000018270-9766.265Monopterus_albus
ENSIPUG00000021966rbfox3b8873.840MGP_CAROLIEiJ_G0017487Rbfox39586.957Mus_caroli
ENSIPUG00000021966rbfox3b8873.840ENSMUSG00000025576Rbfox39586.957Mus_musculus
ENSIPUG00000021966rbfox3b8874.262MGP_PahariEiJ_G0018614Rbfox39587.681Mus_pahari
ENSIPUG00000021966rbfox3b8873.840MGP_SPRETEiJ_G0018331Rbfox39586.957Mus_spretus
ENSIPUG00000021966rbfox3b9866.667ENSMPUG00000012319RBFOX39259.791Mustela_putorius_furo
ENSIPUG00000021966rbfox3b8474.336ENSNGAG00000018006Rbfox310063.611Nannospalax_galili
ENSIPUG00000021966rbfox3b9475.600ENSNBRG00000022885-8665.443Neolamprologus_brichardi
ENSIPUG00000021966rbfox3b9785.385ENSNBRG00000010102rbfox3b7285.385Neolamprologus_brichardi
ENSIPUG00000021966rbfox3b6779.310ENSNLEG00000000153-8279.310Nomascus_leucogenys
ENSIPUG00000021966rbfox3b8854.894ENSMEUG00000004218-6284.615Notamacropus_eugenii
ENSIPUG00000021966rbfox3b6969.841ENSOPRG00000016279-6872.472Ochotona_princeps
ENSIPUG00000021966rbfox3b8875.527ENSODEG00000009433RBFOX310065.797Octodon_degus
ENSIPUG00000021966rbfox3b9885.606ENSONIG00000009549rbfox3b9772.599Oreochromis_niloticus
ENSIPUG00000021966rbfox3b9475.889ENSONIG00000007282-9267.052Oreochromis_niloticus
ENSIPUG00000021966rbfox3b5380.142ENSOCUG00000014217RBFOX37755.088Oryctolagus_cuniculus
ENSIPUG00000021966rbfox3b9885.227ENSORLG00000000905rbfox3b6872.754Oryzias_latipes
ENSIPUG00000021966rbfox3b9885.227ENSORLG00020018030rbfox3b9463.953Oryzias_latipes_hni
ENSIPUG00000021966rbfox3b9885.227ENSORLG00015009200rbfox3b9963.768Oryzias_latipes_hsok
ENSIPUG00000021966rbfox3b9378.810ENSOMEG00000014677rbfox3b8072.727Oryzias_melastigma
ENSIPUG00000021966rbfox3b9774.809ENSOGAG00000029595RBFOX38465.407Otolemur_garnettii
ENSIPUG00000021966rbfox3b8259.641ENSOARG00000002908RBFOX38846.594Ovis_aries
ENSIPUG00000021966rbfox3b8875.949ENSPPAG00000025383RBFOX39966.456Pan_paniscus
ENSIPUG00000021966rbfox3b8476.000ENSPPRG00000007819RBFOX310064.489Panthera_pardus
ENSIPUG00000021966rbfox3b8875.949ENSPTRG00000009727RBFOX310065.988Pan_troglodytes
ENSIPUG00000021966rbfox3b8875.949ENSPANG00000019837RBFOX310065.988Papio_anubis
ENSIPUG00000021966rbfox3b9880.303ENSPKIG00000010299rbfox3a7678.788Paramormyrops_kingsleyae
ENSIPUG00000021966rbfox3b9871.429ENSPKIG00000022633-8559.593Paramormyrops_kingsleyae
ENSIPUG00000021966rbfox3b9783.908ENSPMGG00000008000rbfox3b8281.226Periophthalmus_magnuspinnatus
ENSIPUG00000021966rbfox3b8473.451ENSPEMG00000010500Rbfox310062.222Peromyscus_maniculatus_bairdii
ENSIPUG00000021966rbfox3b5957.589ENSPMAG00000008689rbfox3b9457.589Petromyzon_marinus
ENSIPUG00000021966rbfox3b9876.718ENSPCIG00000005766RBFOX310065.084Phascolarctos_cinereus
ENSIPUG00000021966rbfox3b9885.985ENSPFOG00000018294rbfox3b9761.170Poecilia_formosa
ENSIPUG00000021966rbfox3b6989.189ENSPLAG00000000481rbfox3b5495.152Poecilia_latipinna
ENSIPUG00000021966rbfox3b9473.123ENSPMEG00000022997rbfox3b10064.826Poecilia_mexicana
ENSIPUG00000021966rbfox3b9885.283ENSPREG00000012886rbfox3b9073.333Poecilia_reticulata
ENSIPUG00000021966rbfox3b9769.084ENSPPYG00000008704RBFOX38461.392Pongo_abelii
ENSIPUG00000021966rbfox3b8473.778ENSPCAG00000001401RBFOX310062.291Procavia_capensis
ENSIPUG00000021966rbfox3b8973.750ENSPCOG00000012689RBFOX310062.570Propithecus_coquereli
ENSIPUG00000021966rbfox3b9454.942ENSPVAG00000015243RBFOX310055.989Pteropus_vampyrus
ENSIPUG00000021966rbfox3b9476.190ENSPNYG00000009079-7375.191Pundamilia_nyererei
ENSIPUG00000021966rbfox3b9284.739ENSPNYG00000010414rbfox3b7382.329Pundamilia_nyererei
ENSIPUG00000021966rbfox3b10065.138ENSPNAG00000018173rbfox3b9265.138Pygocentrus_nattereri
ENSIPUG00000021966rbfox3b9877.239ENSPNAG00000002889rbfox3a9854.167Pygocentrus_nattereri
ENSIPUG00000021966rbfox3b8874.262ENSRNOG00000003386Rbfox310064.451Rattus_norvegicus
ENSIPUG00000021966rbfox3b9775.191ENSRBIG00000040449RBFOX38965.634Rhinopithecus_bieti
ENSIPUG00000021966rbfox3b8875.949ENSRROG00000000766RBFOX310065.988Rhinopithecus_roxellana
ENSIPUG00000021966rbfox3b8875.105ENSSBOG00000031591RBFOX310065.407Saimiri_boliviensis_boliviensis
ENSIPUG00000021966rbfox3b9868.367ENSSHAG00000016076RBFOX310057.726Sarcophilus_harrisii
ENSIPUG00000021966rbfox3b9869.663ENSSFOG00015004716RBFOX38959.827Scleropages_formosus
ENSIPUG00000021966rbfox3b9880.377ENSSFOG00015023260rbfox3a9460.231Scleropages_formosus
ENSIPUG00000021966rbfox3b9880.071ENSSMAG00000012618rbfox3b7570.083Scophthalmus_maximus
ENSIPUG00000021966rbfox3b9876.046ENSSMAG00000019052-10065.130Scophthalmus_maximus
ENSIPUG00000021966rbfox3b9877.907ENSSDUG00000015801-8767.155Seriola_dumerili
ENSIPUG00000021966rbfox3b9473.123ENSSDUG00000023183rbfox3b10064.535Seriola_dumerili
ENSIPUG00000021966rbfox3b9775.769ENSSLDG00000016098-8864.809Seriola_lalandi_dorsalis
ENSIPUG00000021966rbfox3b9885.606ENSSLDG00000000149rbfox3b8573.547Seriola_lalandi_dorsalis
ENSIPUG00000021966rbfox3b8877.311ENSSPUG00000011733RBFOX39967.246Sphenodon_punctatus
ENSIPUG00000021966rbfox3b8872.881ENSSPAG00000004898-7571.315Stegastes_partitus
ENSIPUG00000021966rbfox3b9879.545ENSSPAG00000017571rbfox3b8468.882Stegastes_partitus
ENSIPUG00000021966rbfox3b7779.327ENSSSCG00000039498RBFOX39664.151Sus_scrofa
ENSIPUG00000021966rbfox3b9885.938ENSTRUG00000004894rbfox3b9171.067Takifugu_rubripes
ENSIPUG00000021966rbfox3b9876.351ENSTNIG00000011278rbfox3b8767.196Tetraodon_nigroviridis
ENSIPUG00000021966rbfox3b5571.034ENSTBEG00000004296-6866.667Tupaia_belangeri
ENSIPUG00000021966rbfox3b8467.111ENSTTRG00000003676RBFOX310058.380Tursiops_truncatus
ENSIPUG00000021966rbfox3b8875.949ENSUAMG00000004668RBFOX310065.988Ursus_americanus
ENSIPUG00000021966rbfox3b9875.665ENSVVUG00000017864RBFOX310065.698Vulpes_vulpes
ENSIPUG00000021966rbfox3b8172.811ENSXETG00000020236rbfox38553.005Xenopus_tropicalis
ENSIPUG00000021966rbfox3b9784.848ENSXCOG00000018262rbfox3b10072.866Xiphophorus_couchianus
ENSIPUG00000021966rbfox3b9885.606ENSXMAG00000012939rbfox3b8573.547Xiphophorus_maculatus

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