EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000021998 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 813 bases
Position: chr12:25918257-25919069
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000032722	zf-C2H2	PF00096.26	1.2e-42	1	7
ENSIPUP00000032722	zf-C2H2	PF00096.26	1.2e-42	2	7
ENSIPUP00000032722	zf-C2H2	PF00096.26	1.2e-42	3	7
ENSIPUP00000032722	zf-C2H2	PF00096.26	1.2e-42	4	7
ENSIPUP00000032722	zf-C2H2	PF00096.26	1.2e-42	5	7
ENSIPUP00000032722	zf-C2H2	PF00096.26	1.2e-42	6	7
ENSIPUP00000032722	zf-C2H2	PF00096.26	1.2e-42	7	7
ENSIPUP00000032722	zf-met	PF12874.7	4.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000034013	-	813	-	ENSIPUP00000032722	270 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000021998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000021998's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000021998	-	93	70.238	ENSIPUG00000023688	-	99	67.984
ENSIPUG00000021998	-	70	71.779	ENSIPUG00000015294	-	61	71.779
ENSIPUG00000021998	-	93	66.327	ENSIPUG00000015601	-	50	66.327
ENSIPUG00000021998	-	91	64.211	ENSIPUG00000021484	-	98	64.211
ENSIPUG00000021998	-	93	37.241	ENSIPUG00000018102	znf646	75	37.241
ENSIPUG00000021998	-	96	45.324	ENSIPUG00000011652	znf648	77	45.324
ENSIPUG00000021998	-	91	63.866	ENSIPUG00000005339	-	83	63.866
ENSIPUG00000021998	-	96	44.853	ENSIPUG00000012830	-	90	44.853
ENSIPUG00000021998	-	96	62.802	ENSIPUG00000021472	-	91	62.802
ENSIPUG00000021998	-	90	40.000	ENSIPUG00000005379	e4f1	71	40.000
ENSIPUG00000021998	-	99	39.819	ENSIPUG00000007076	-	91	39.819
ENSIPUG00000021998	-	91	44.776	ENSIPUG00000001248	prdm5	79	41.224
ENSIPUG00000021998	-	93	51.323	ENSIPUG00000022266	ZNF135	61	48.770
ENSIPUG00000021998	-	90	63.592	ENSIPUG00000003960	-	86	63.592
ENSIPUG00000021998	-	91	64.865	ENSIPUG00000015177	-	67	64.865
ENSIPUG00000021998	-	95	61.170	ENSIPUG00000004428	-	76	61.170
ENSIPUG00000021998	-	95	59.426	ENSIPUG00000021518	-	89	61.966
ENSIPUG00000021998	-	91	64.975	ENSIPUG00000021515	-	85	62.705
ENSIPUG00000021998	-	91	62.051	ENSIPUG00000015203	-	63	62.051
ENSIPUG00000021998	-	97	61.728	ENSIPUG00000022741	-	83	61.728
ENSIPUG00000021998	-	96	31.068	ENSIPUG00000002510	-	57	31.068
ENSIPUG00000021998	-	94	35.366	ENSIPUG00000002075	znf341	51	35.366
ENSIPUG00000021998	-	91	66.667	ENSIPUG00000009750	-	94	66.667
ENSIPUG00000021998	-	91	63.077	ENSIPUG00000021527	-	91	63.077
ENSIPUG00000021998	-	94	52.222	ENSIPUG00000016009	znf596	68	52.222
ENSIPUG00000021998	-	95	73.604	ENSIPUG00000022751	-	99	73.604
ENSIPUG00000021998	-	91	60.331	ENSIPUG00000021441	-	93	60.816
ENSIPUG00000021998	-	99	66.122	ENSIPUG00000015468	-	92	61.778
ENSIPUG00000021998	-	91	66.364	ENSIPUG00000016075	-	92	66.364
ENSIPUG00000021998	-	91	39.091	ENSIPUG00000011399	zbtb47b	75	39.091
ENSIPUG00000021998	-	93	32.911	ENSIPUG00000015844	snai1b	57	33.117
ENSIPUG00000021998	-	90	37.226	ENSIPUG00000000131	snai2	51	37.226
ENSIPUG00000021998	-	92	61.638	ENSIPUG00000006936	-	99	59.833
ENSIPUG00000021998	-	93	59.426	ENSIPUG00000006916	-	85	59.426
ENSIPUG00000021998	-	91	59.111	ENSIPUG00000001941	-	83	59.111
ENSIPUG00000021998	-	89	36.765	ENSIPUG00000005547	-	51	36.765
ENSIPUG00000021998	-	93	72.081	ENSIPUG00000015400	-	93	72.081
ENSIPUG00000021998	-	99	58.261	ENSIPUG00000021434	-	99	58.261
ENSIPUG00000021998	-	97	68.110	ENSIPUG00000023635	-	99	68.110
ENSIPUG00000021998	-	91	46.502	ENSIPUG00000019205	-	75	46.502
ENSIPUG00000021998	-	91	53.689	ENSIPUG00000013315	-	93	53.689
ENSIPUG00000021998	-	91	63.393	ENSIPUG00000015233	-	70	63.393
ENSIPUG00000021998	-	90	44.048	ENSIPUG00000012769	gfi1b	51	44.048
ENSIPUG00000021998	-	91	34.211	ENSIPUG00000015037	znf711	51	34.211
ENSIPUG00000021998	-	91	61.883	ENSIPUG00000005733	-	67	61.883
ENSIPUG00000021998	-	90	45.641	ENSIPUG00000012109	ZN12	51	45.641
ENSIPUG00000021998	-	96	60.816	ENSIPUG00000017575	-	63	60.816
ENSIPUG00000021998	-	99	37.849	ENSIPUG00000008581	znf319b	88	38.077
ENSIPUG00000021998	-	91	63.452	ENSIPUG00000021556	-	82	63.452
ENSIPUG00000021998	-	98	72.018	ENSIPUG00000005581	-	78	72.018
ENSIPUG00000021998	-	99	68.182	ENSIPUG00000011073	-	97	68.182
ENSIPUG00000021998	-	91	68.841	ENSIPUG00000012960	-	90	68.841
ENSIPUG00000021998	-	90	64.975	ENSIPUG00000002655	-	98	64.975
ENSIPUG00000021998	-	91	39.545	ENSIPUG00000003040	zbtb47a	78	39.545
ENSIPUG00000021998	-	94	64.646	ENSIPUG00000013065	-	96	69.403
ENSIPUG00000021998	-	93	44.248	ENSIPUG00000004905	znf236	59	44.248
ENSIPUG00000021998	-	93	61.233	ENSIPUG00000015121	-	58	61.233
ENSIPUG00000021998	-	90	56.951	ENSIPUG00000023761	-	60	56.951
ENSIPUG00000021998	-	94	36.653	ENSIPUG00000011258	-	87	38.976
ENSIPUG00000021998	-	90	34.682	ENSIPUG00000024004	-	76	34.682
ENSIPUG00000021998	-	90	37.500	ENSIPUG00000013526	-	72	37.500
ENSIPUG00000021998	-	93	73.364	ENSIPUG00000007934	-	96	73.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000021998	-	95	45.455	ENSAPOG00000019960	-	92	45.455	Acanthochromis_polyacanthus
ENSIPUG00000021998	-	90	57.426	ENSAPOG00000008802	-	99	57.426	Acanthochromis_polyacanthus
ENSIPUG00000021998	-	90	52.727	ENSAPOG00000006303	-	92	51.948	Acanthochromis_polyacanthus
ENSIPUG00000021998	-	90	53.247	ENSACIG00000004745	-	91	51.282	Amphilophus_citrinellus
ENSIPUG00000021998	-	90	54.733	ENSACIG00000022658	-	90	54.733	Amphilophus_citrinellus
ENSIPUG00000021998	-	94	51.452	ENSAOCG00000013130	-	82	51.452	Amphiprion_ocellaris
ENSIPUG00000021998	-	90	51.440	ENSAOCG00000013710	-	83	51.440	Amphiprion_ocellaris
ENSIPUG00000021998	-	98	51.852	ENSAOCG00000014165	-	83	51.852	Amphiprion_ocellaris
ENSIPUG00000021998	-	94	51.452	ENSAPEG00000009383	-	75	53.659	Amphiprion_percula
ENSIPUG00000021998	-	93	54.028	ENSAPEG00000006650	-	92	53.279	Amphiprion_percula
ENSIPUG00000021998	-	94	56.557	ENSATEG00000017618	-	95	56.557	Anabas_testudineus
ENSIPUG00000021998	-	94	56.557	ENSATEG00000015695	-	95	56.557	Anabas_testudineus
ENSIPUG00000021998	-	92	45.643	ENSACLG00000019291	-	88	45.643	Astatotilapia_calliptera
ENSIPUG00000021998	-	91	50.000	ENSACLG00000018746	-	89	50.262	Astatotilapia_calliptera
ENSIPUG00000021998	-	98	51.867	ENSACLG00000021343	-	99	52.245	Astatotilapia_calliptera
ENSIPUG00000021998	-	90	55.825	ENSACLG00000023513	-	81	55.825	Astatotilapia_calliptera
ENSIPUG00000021998	-	90	54.839	ENSACLG00000026703	-	72	54.839	Astatotilapia_calliptera
ENSIPUG00000021998	-	91	56.291	ENSAMXG00000043302	-	73	56.291	Astyanax_mexicanus
ENSIPUG00000021998	-	91	68.750	ENSAMXG00000041975	-	83	68.750	Astyanax_mexicanus
ENSIPUG00000021998	-	89	69.903	ENSAMXG00000035920	-	85	69.903	Astyanax_mexicanus
ENSIPUG00000021998	-	95	59.836	ENSAMXG00000039408	-	91	59.836	Astyanax_mexicanus
ENSIPUG00000021998	-	91	62.295	ENSAMXG00000042275	-	90	62.295	Astyanax_mexicanus
ENSIPUG00000021998	-	91	54.922	ENSBTAG00000016191	ZNF32	76	54.922	Bos_taurus
ENSIPUG00000021998	-	91	54.922	ENSCHIG00000021099	ZNF32	76	54.922	Capra_hircus
ENSIPUG00000021998	-	95	52.970	ENSCSAVG00000001808	-	99	52.970	Ciona_savignyi
ENSIPUG00000021998	-	90	57.895	ENSCVAG00000021225	-	95	57.895	Cyprinodon_variegatus
ENSIPUG00000021998	-	91	51.626	ENSDARG00000099986	si:ch211-207i20.2	62	51.626	Danio_rerio
ENSIPUG00000021998	-	91	55.440	ENSDNOG00000035046	ZNF32	76	55.440	Dasypus_novemcinctus
ENSIPUG00000021998	-	91	54.922	ENSEASG00005006910	ZNF32	71	54.922	Equus_asinus_asinus
ENSIPUG00000021998	-	91	54.922	ENSECAG00000023676	ZNF32	71	54.922	Equus_caballus
ENSIPUG00000021998	-	92	53.623	ENSELUG00000021229	-	82	53.623	Esox_lucius
ENSIPUG00000021998	-	91	51.131	ENSFHEG00000000678	-	67	51.131	Fundulus_heteroclitus
ENSIPUG00000021998	-	94	50.207	ENSFHEG00000018063	-	90	50.698	Fundulus_heteroclitus
ENSIPUG00000021998	-	90	51.795	ENSGAFG00000020499	-	60	48.879	Gambusia_affinis
ENSIPUG00000021998	-	91	49.593	ENSGACG00000010352	si:ch211-207i20.2	62	49.593	Gasterosteus_aculeatus
ENSIPUG00000021998	-	91	41.569	ENSHBUG00000013296	-	97	42.213	Haplochromis_burtoni
ENSIPUG00000021998	-	93	54.054	ENSHBUG00000021003	-	89	54.054	Haplochromis_burtoni
ENSIPUG00000021998	-	93	53.368	ENSHBUG00000015166	-	82	53.368	Haplochromis_burtoni
ENSIPUG00000021998	-	95	50.781	ENSLBEG00000020128	-	95	51.232	Labrus_bergylta
ENSIPUG00000021998	-	91	48.936	ENSMAMG00000014734	-	55	48.936	Mastacembelus_armatus
ENSIPUG00000021998	-	97	46.122	ENSMZEG00005020162	-	73	46.122	Maylandia_zebra
ENSIPUG00000021998	-	91	53.947	ENSMZEG00005007262	-	96	53.947	Maylandia_zebra
ENSIPUG00000021998	-	98	51.556	ENSMZEG00005019918	-	87	54.018	Maylandia_zebra
ENSIPUG00000021998	-	92	48.309	ENSMZEG00005012715	-	77	48.309	Maylandia_zebra
ENSIPUG00000021998	-	94	48.361	ENSMZEG00005014592	-	90	48.361	Maylandia_zebra
ENSIPUG00000021998	-	93	45.089	ENSMZEG00005020156	-	79	45.089	Maylandia_zebra
ENSIPUG00000021998	-	90	52.466	ENSMZEG00005025343	-	80	52.466	Maylandia_zebra
ENSIPUG00000021998	-	91	50.000	ENSMZEG00005003336	-	77	47.951	Maylandia_zebra
ENSIPUG00000021998	-	90	54.667	ENSMZEG00005021052	-	72	54.667	Maylandia_zebra
ENSIPUG00000021998	-	91	52.604	ENSMZEG00005026082	-	69	51.795	Maylandia_zebra
ENSIPUG00000021998	-	98	52.439	ENSMMOG00000010703	-	92	52.439	Mola_mola
ENSIPUG00000021998	-	90	51.639	ENSMMOG00000004460	-	94	51.639	Mola_mola
ENSIPUG00000021998	-	93	46.457	ENSMMOG00000006131	-	93	46.721	Mola_mola
ENSIPUG00000021998	-	97	51.724	ENSMALG00000015655	-	96	53.368	Monopterus_albus
ENSIPUG00000021998	-	91	51.364	ENSMALG00000004216	-	61	51.364	Monopterus_albus
ENSIPUG00000021998	-	96	52.869	ENSMALG00000007051	-	98	52.869	Monopterus_albus
ENSIPUG00000021998	-	91	59.483	MGP_PahariEiJ_G0022533	Zfp637	76	54.922	Mus_pahari
ENSIPUG00000021998	-	91	59.483	MGP_SPRETEiJ_G0029809	Zfp637	76	54.922	Mus_spretus
ENSIPUG00000021998	-	91	54.922	ENSNGAG00000020281	Zfp637	71	54.922	Nannospalax_galili
ENSIPUG00000021998	-	97	49.099	ENSNBRG00000005849	-	87	47.297	Neolamprologus_brichardi
ENSIPUG00000021998	-	95	49.398	ENSNBRG00000005796	-	94	49.398	Neolamprologus_brichardi
ENSIPUG00000021998	-	91	45.926	ENSNBRG00000003000	-	80	45.926	Neolamprologus_brichardi
ENSIPUG00000021998	-	93	44.082	ENSNBRG00000016564	-	83	44.082	Neolamprologus_brichardi
ENSIPUG00000021998	-	90	55.187	ENSNBRG00000000523	-	66	55.187	Neolamprologus_brichardi
ENSIPUG00000021998	-	95	48.770	ENSNBRG00000005805	-	93	48.770	Neolamprologus_brichardi
ENSIPUG00000021998	-	91	49.756	ENSONIG00000015552	-	90	49.756	Oreochromis_niloticus
ENSIPUG00000021998	-	94	49.590	ENSONIG00000015514	-	87	49.590	Oreochromis_niloticus
ENSIPUG00000021998	-	96	45.495	ENSONIG00000005693	-	97	46.988	Oreochromis_niloticus
ENSIPUG00000021998	-	91	54.922	ENSOARG00000002999	ZNF32	76	54.922	Ovis_aries
ENSIPUG00000021998	-	90	46.694	ENSPLAG00000015973	-	99	46.694	Poecilia_latipinna
ENSIPUG00000021998	-	91	48.469	ENSPMEG00000006726	-	90	48.469	Poecilia_mexicana
ENSIPUG00000021998	-	90	52.917	ENSPMEG00000016458	-	97	49.321	Poecilia_mexicana
ENSIPUG00000021998	-	98	56.951	ENSPREG00000010437	-	80	56.951	Poecilia_reticulata
ENSIPUG00000021998	-	91	52.245	ENSPCAG00000005270	-	96	52.632	Procavia_capensis
ENSIPUG00000021998	-	93	57.558	ENSPVAG00000009430	-	79	56.148	Pteropus_vampyrus
ENSIPUG00000021998	-	91	50.000	ENSPNYG00000007597	-	84	50.000	Pundamilia_nyererei
ENSIPUG00000021998	-	98	55.804	ENSPNYG00000002684	-	96	53.086	Pundamilia_nyererei
ENSIPUG00000021998	-	96	62.130	ENSPNAG00000029997	-	82	62.130	Pygocentrus_nattereri
ENSIPUG00000021998	-	91	48.560	ENSSFOG00015015878	-	95	48.560	Scleropages_formosus
ENSIPUG00000021998	-	96	52.542	ENSSDUG00000008943	-	85	54.751	Seriola_dumerili
ENSIPUG00000021998	-	91	47.799	ENSSDUG00000015159	-	81	47.619	Seriola_dumerili
ENSIPUG00000021998	-	98	53.509	ENSSDUG00000015182	-	69	53.509	Seriola_dumerili
ENSIPUG00000021998	-	91	50.376	ENSSDUG00000015254	-	89	50.673	Seriola_dumerili
ENSIPUG00000021998	-	90	53.112	ENSSLDG00000020675	-	97	50.000	Seriola_lalandi_dorsalis
ENSIPUG00000021998	-	90	50.735	ENSSLDG00000012036	-	96	50.735	Seriola_lalandi_dorsalis
ENSIPUG00000021998	-	90	51.020	ENSSLDG00000018273	-	76	51.020	Seriola_lalandi_dorsalis
ENSIPUG00000021998	-	90	55.983	ENSSARG00000000532	-	85	55.983	Sorex_araneus
ENSIPUG00000021998	-	96	52.439	ENSXCOG00000008116	-	99	52.439	Xiphophorus_couchianus