EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000022357 (Gene tree)
Gene ID: 108260385
Gene Symbol: mrm1
Alias: si:dkey-189h5.1
Full Name: mitochondrial rRNA methyltransferase 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 4893 bases
Position: chr28:2694551-2699443
Accession: 108260385
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000033256	SpoU_sub_bind	PF08032.12	8.3e-14	1	1
ENSIPUP00000033256	SpoU_methylase	PF00588.19	2.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000034564	-	3747	XM_017460647	ENSIPUP00000033256	390 (aa)	XP_017316136	A0A2D0QEH7

Gene Model

Click here to download ENSIPUG00000022357's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000022357's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000022357	mrm1	76	40.924	ENSG00000278619	MRM1	78	40.924	Homo_sapiens
ENSIPUG00000022357	mrm1	91	50.975	ENSAPOG00000016309	mrm1	87	50.696	Acanthochromis_polyacanthus
ENSIPUG00000022357	mrm1	76	41.118	ENSAMEG00000008301	MRM1	78	41.118	Ailuropoda_melanoleuca
ENSIPUG00000022357	mrm1	92	49.077	ENSACIG00000012244	mrm1	93	49.211	Amphilophus_citrinellus
ENSIPUG00000022357	mrm1	92	52.342	ENSAOCG00000000362	mrm1	88	52.066	Amphiprion_ocellaris
ENSIPUG00000022357	mrm1	92	52.342	ENSAPEG00000004511	mrm1	88	52.066	Amphiprion_percula
ENSIPUG00000022357	mrm1	73	46.853	ENSAPLG00000006433	MRM1	87	47.232	Anas_platyrhynchos
ENSIPUG00000022357	mrm1	71	43.885	ENSACAG00000002573	MRM1	80	45.736	Anolis_carolinensis
ENSIPUG00000022357	mrm1	68	43.015	ENSANAG00000025500	MRM1	76	43.015	Aotus_nancymaae
ENSIPUG00000022357	mrm1	76	54.605	ENSACLG00000023745	mrm1	98	55.229	Astatotilapia_calliptera
ENSIPUG00000022357	mrm1	98	56.777	ENSAMXG00000030596	mrm1	96	56.522	Astyanax_mexicanus
ENSIPUG00000022357	mrm1	98	56.777	ENSAMXG00000007295	mrm1	96	56.522	Astyanax_mexicanus
ENSIPUG00000022357	mrm1	65	44.186	ENSBTAG00000010311	MRM1	71	44.186	Bos_taurus
ENSIPUG00000022357	mrm1	68	42.435	ENSCJAG00000001023	MRM1	76	43.750	Callithrix_jacchus
ENSIPUG00000022357	mrm1	65	45.914	ENSCAFG00000017849	MRM1	73	46.304	Canis_familiaris
ENSIPUG00000022357	mrm1	65	45.914	ENSCAFG00020002377	MRM1	73	46.304	Canis_lupus_dingo
ENSIPUG00000022357	mrm1	65	44.574	ENSCHIG00000008558	MRM1	71	44.574	Capra_hircus
ENSIPUG00000022357	mrm1	82	39.815	ENSTSYG00000036380	MRM1	71	45.560	Carlito_syrichta
ENSIPUG00000022357	mrm1	65	43.191	ENSCPOG00000004283	MRM1	72	44.574	Cavia_porcellus
ENSIPUG00000022357	mrm1	68	42.647	ENSCCAG00000020032	MRM1	76	42.647	Cebus_capucinus
ENSIPUG00000022357	mrm1	76	42.105	ENSCATG00000041516	MRM1	78	42.105	Cercocebus_atys
ENSIPUG00000022357	mrm1	76	41.584	ENSCLAG00000010960	MRM1	72	44.828	Chinchilla_lanigera
ENSIPUG00000022357	mrm1	76	41.776	ENSCSAG00000006055	MRM1	78	41.776	Chlorocebus_sabaeus
ENSIPUG00000022357	mrm1	74	42.361	ENSCPBG00000009581	MRM1	54	45.455	Chrysemys_picta_bellii
ENSIPUG00000022357	mrm1	76	42.105	ENSCANG00000025543	MRM1	78	42.105	Colobus_angolensis_palliatus
ENSIPUG00000022357	mrm1	82	40.923	ENSCGRG00001001937	Mrm1	80	45.560	Cricetulus_griseus_chok1gshd
ENSIPUG00000022357	mrm1	82	40.923	ENSCGRG00000009593	Mrm1	80	45.560	Cricetulus_griseus_crigri
ENSIPUG00000022357	mrm1	77	54.967	ENSCSEG00000014575	mrm1	77	54.967	Cynoglossus_semilaevis
ENSIPUG00000022357	mrm1	77	53.846	ENSCVAG00000012104	mrm1	74	53.846	Cyprinodon_variegatus
ENSIPUG00000022357	mrm1	52	64.532	ENSDARG00000059658	mrm1	99	64.532	Danio_rerio
ENSIPUG00000022357	mrm1	84	34.940	ENSDNOG00000035159	MRM1	83	34.639	Dasypus_novemcinctus
ENSIPUG00000022357	mrm1	54	45.662	ENSDORG00000013267	Mrm1	91	45.662	Dipodomys_ordii
ENSIPUG00000022357	mrm1	53	39.631	ENSETEG00000000378	MRM1	81	39.631	Echinops_telfairi
ENSIPUG00000022357	mrm1	67	46.241	ENSEASG00005002123	MRM1	74	45.489	Equus_asinus_asinus
ENSIPUG00000022357	mrm1	66	46.388	ENSECAG00000025139	MRM1	73	45.627	Equus_caballus
ENSIPUG00000022357	mrm1	80	57.051	ENSELUG00000012392	mrm1	69	56.731	Esox_lucius
ENSIPUG00000022357	mrm1	76	41.118	ENSFCAG00000031667	MRM1	71	44.015	Felis_catus
ENSIPUG00000022357	mrm1	53	45.972	ENSFDAG00000018545	MRM1	70	45.972	Fukomys_damarensis
ENSIPUG00000022357	mrm1	76	53.535	ENSFHEG00000005529	mrm1	80	53.722	Fundulus_heteroclitus
ENSIPUG00000022357	mrm1	62	50.820	ENSGALG00000039523	MRM1	96	50.820	Gallus_gallus
ENSIPUG00000022357	mrm1	79	53.722	ENSGAFG00000012959	mrm1	85	50.751	Gambusia_affinis
ENSIPUG00000022357	mrm1	67	60.536	ENSGACG00000004024	mrm1	98	60.536	Gasterosteus_aculeatus
ENSIPUG00000022357	mrm1	76	43.729	ENSGAGG00000000908	MRM1	64	46.538	Gopherus_agassizii
ENSIPUG00000022357	mrm1	76	40.924	ENSGGOG00000007979	MRM1	78	40.924	Gorilla_gorilla
ENSIPUG00000022357	mrm1	76	54.698	ENSHBUG00000004484	mrm1	98	55.229	Haplochromis_burtoni
ENSIPUG00000022357	mrm1	65	43.023	ENSHGLG00000008701	MRM1	72	43.023	Heterocephalus_glaber_female
ENSIPUG00000022357	mrm1	54	45.370	ENSHGLG00100012646	MRM1	72	45.370	Heterocephalus_glaber_male
ENSIPUG00000022357	mrm1	87	52.632	ENSHCOG00000003665	mrm1	92	52.632	Hippocampus_comes
ENSIPUG00000022357	mrm1	82	40.123	ENSSTOG00000002422	MRM1	85	40.615	Ictidomys_tridecemlineatus
ENSIPUG00000022357	mrm1	65	46.124	ENSJJAG00000010068	Mrm1	85	46.124	Jaculus_jaculus
ENSIPUG00000022357	mrm1	78	58.170	ENSLBEG00000009581	mrm1	99	57.003	Labrus_bergylta
ENSIPUG00000022357	mrm1	71	43.273	ENSLACG00000017664	MRM1	86	45.850	Latimeria_chalumnae
ENSIPUG00000022357	mrm1	81	52.366	ENSLOCG00000004945	mrm1	98	51.111	Lepisosteus_oculatus
ENSIPUG00000022357	mrm1	76	41.584	ENSLAFG00000012584	MRM1	77	45.174	Loxodonta_africana
ENSIPUG00000022357	mrm1	76	40.924	ENSMFAG00000032112	MRM1	79	42.105	Macaca_fascicularis
ENSIPUG00000022357	mrm1	76	42.434	ENSMMUG00000000622	MRM1	81	42.434	Macaca_mulatta
ENSIPUG00000022357	mrm1	76	40.924	ENSMNEG00000044557	MRM1	79	42.105	Macaca_nemestrina
ENSIPUG00000022357	mrm1	76	42.105	ENSMLEG00000031933	MRM1	78	42.105	Mandrillus_leucophaeus
ENSIPUG00000022357	mrm1	76	56.271	ENSMAMG00000007018	mrm1	97	56.536	Mastacembelus_armatus
ENSIPUG00000022357	mrm1	76	54.934	ENSMZEG00005008320	mrm1	98	55.556	Maylandia_zebra
ENSIPUG00000022357	mrm1	82	41.975	ENSMAUG00000020976	Mrm1	80	46.899	Mesocricetus_auratus
ENSIPUG00000022357	mrm1	65	44.186	ENSMICG00000004216	MRM1	77	44.186	Microcebus_murinus
ENSIPUG00000022357	mrm1	82	51.929	ENSMMOG00000001468	mrm1	98	51.929	Mola_mola
ENSIPUG00000022357	mrm1	91	40.884	ENSMODG00000003307	MRM1	62	46.442	Monodelphis_domestica
ENSIPUG00000022357	mrm1	76	55.369	ENSMALG00000014364	mrm1	95	54.902	Monopterus_albus
ENSIPUG00000022357	mrm1	76	41.914	MGP_CAROLIEiJ_G0016896	Mrm1	83	45.221	Mus_caroli
ENSIPUG00000022357	mrm1	76	41.914	ENSMUSG00000018405	Mrm1	83	45.221	Mus_musculus
ENSIPUG00000022357	mrm1	68	44.649	MGP_PahariEiJ_G0018026	Mrm1	83	44.649	Mus_pahari
ENSIPUG00000022357	mrm1	76	41.914	MGP_SPRETEiJ_G0017741	Mrm1	83	45.221	Mus_spretus
ENSIPUG00000022357	mrm1	66	44.487	ENSMPUG00000015063	MRM1	72	44.487	Mustela_putorius_furo
ENSIPUG00000022357	mrm1	65	44.961	ENSMLUG00000013208	MRM1	72	44.961	Myotis_lucifugus
ENSIPUG00000022357	mrm1	65	45.349	ENSNGAG00000019175	Mrm1	78	45.349	Nannospalax_galili
ENSIPUG00000022357	mrm1	76	54.276	ENSNBRG00000023533	mrm1	98	54.902	Neolamprologus_brichardi
ENSIPUG00000022357	mrm1	76	40.594	ENSNLEG00000002300	MRM1	78	40.594	Nomascus_leucogenys
ENSIPUG00000022357	mrm1	65	42.802	ENSOPRG00000012866	MRM1	74	44.186	Ochotona_princeps
ENSIPUG00000022357	mrm1	74	55.369	ENSONIG00000021236	mrm1	98	56.000	Oreochromis_niloticus
ENSIPUG00000022357	mrm1	65	44.961	ENSOCUG00000012149	MRM1	71	44.747	Oryctolagus_cuniculus
ENSIPUG00000022357	mrm1	78	52.805	ENSORLG00000025876	mrm1	95	51.961	Oryzias_latipes
ENSIPUG00000022357	mrm1	78	53.135	ENSORLG00020021701	mrm1	95	52.288	Oryzias_latipes_hni
ENSIPUG00000022357	mrm1	78	53.135	ENSORLG00015020702	mrm1	95	52.475	Oryzias_latipes_hsok
ENSIPUG00000022357	mrm1	78	52.614	ENSOMEG00000003504	mrm1	96	51.961	Oryzias_melastigma
ENSIPUG00000022357	mrm1	65	43.023	ENSOGAG00000013785	MRM1	81	43.023	Otolemur_garnettii
ENSIPUG00000022357	mrm1	65	44.574	ENSOARG00000018616	MRM1	71	44.574	Ovis_aries
ENSIPUG00000022357	mrm1	76	40.924	ENSPPAG00000043135	MRM1	79	40.924	Pan_paniscus
ENSIPUG00000022357	mrm1	76	41.447	ENSPPRG00000023620	MRM1	71	44.402	Panthera_pardus
ENSIPUG00000022357	mrm1	64	43.969	ENSPTIG00000009829	MRM1	88	43.969	Panthera_tigris_altaica
ENSIPUG00000022357	mrm1	76	40.924	ENSPTRG00000009049	MRM1	78	40.924	Pan_troglodytes
ENSIPUG00000022357	mrm1	76	41.584	ENSPANG00000022126	MRM1	78	41.584	Papio_anubis
ENSIPUG00000022357	mrm1	91	50.838	ENSPKIG00000007654	mrm1	92	51.117	Paramormyrops_kingsleyae
ENSIPUG00000022357	mrm1	67	45.594	ENSPSIG00000017622	MRM1	93	45.594	Pelodiscus_sinensis
ENSIPUG00000022357	mrm1	77	52.117	ENSPMGG00000003905	mrm1	87	52.117	Periophthalmus_magnuspinnatus
ENSIPUG00000022357	mrm1	53	37.900	ENSPMAG00000000484	mrm1	100	37.900	Petromyzon_marinus
ENSIPUG00000022357	mrm1	66	46.183	ENSPCIG00000003352	MRM1	68	46.183	Phascolarctos_cinereus
ENSIPUG00000022357	mrm1	79	48.867	ENSPFOG00000018234	mrm1	73	48.867	Poecilia_formosa
ENSIPUG00000022357	mrm1	79	53.398	ENSPLAG00000020759	mrm1	75	53.398	Poecilia_latipinna
ENSIPUG00000022357	mrm1	79	53.398	ENSPMEG00000021744	mrm1	75	53.398	Poecilia_mexicana
ENSIPUG00000022357	mrm1	77	54.485	ENSPREG00000013224	mrm1	78	54.485	Poecilia_reticulata
ENSIPUG00000022357	mrm1	76	36.304	ENSPCAG00000011756	MRM1	72	38.610	Procavia_capensis
ENSIPUG00000022357	mrm1	65	44.186	ENSPCOG00000020871	MRM1	76	44.186	Propithecus_coquereli
ENSIPUG00000022357	mrm1	65	37.354	ENSPVAG00000011626	MRM1	70	37.354	Pteropus_vampyrus
ENSIPUG00000022357	mrm1	76	54.276	ENSPNYG00000000528	mrm1	98	54.902	Pundamilia_nyererei
ENSIPUG00000022357	mrm1	99	63.797	ENSPNAG00000014551	mrm1	96	62.944	Pygocentrus_nattereri
ENSIPUG00000022357	mrm1	82	40.123	ENSRNOG00000027901	Mrm1	89	40.123	Rattus_norvegicus
ENSIPUG00000022357	mrm1	76	41.776	ENSRBIG00000040494	MRM1	78	41.776	Rhinopithecus_bieti
ENSIPUG00000022357	mrm1	76	41.776	ENSRROG00000041704	MRM1	79	41.776	Rhinopithecus_roxellana
ENSIPUG00000022357	mrm1	68	43.382	ENSSBOG00000024145	MRM1	76	43.382	Saimiri_boliviensis_boliviensis
ENSIPUG00000022357	mrm1	80	53.312	ENSSFOG00015022117	mrm1	66	59.924	Scleropages_formosus
ENSIPUG00000022357	mrm1	78	56.436	ENSSMAG00000009657	mrm1	96	54.902	Scophthalmus_maximus
ENSIPUG00000022357	mrm1	92	52.033	ENSSDUG00000009089	mrm1	91	51.351	Seriola_dumerili
ENSIPUG00000022357	mrm1	88	52.394	ENSSLDG00000024141	mrm1	99	51.685	Seriola_lalandi_dorsalis
ENSIPUG00000022357	mrm1	76	44.295	ENSSPUG00000000265	MRM1	66	48.828	Sphenodon_punctatus
ENSIPUG00000022357	mrm1	64	44.882	ENSSSCG00000017691	MRM1	68	44.882	Sus_scrofa
ENSIPUG00000022357	mrm1	93	49.725	ENSTRUG00000011737	mrm1	93	48.901	Takifugu_rubripes
ENSIPUG00000022357	mrm1	91	51.124	ENSTNIG00000010088	mrm1	93	51.404	Tetraodon_nigroviridis
ENSIPUG00000022357	mrm1	54	38.991	ENSTBEG00000007237	-	77	42.197	Tupaia_belangeri
ENSIPUG00000022357	mrm1	83	40.122	ENSTTRG00000011984	MRM1	73	43.446	Tursiops_truncatus
ENSIPUG00000022357	mrm1	75	47.863	ENSUAMG00000023152	MRM1	87	40.268	Ursus_americanus
ENSIPUG00000022357	mrm1	65	45.174	ENSVVUG00000018420	MRM1	61	45.946	Vulpes_vulpes
ENSIPUG00000022357	mrm1	86	50.298	ENSXCOG00000003622	mrm1	88	50.298	Xiphophorus_couchianus
ENSIPUG00000022357	mrm1	87	50.294	ENSXMAG00000014890	mrm1	87	50.294	Xiphophorus_maculatus