EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000022394 (Gene tree)
Gene ID: 108266861
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 5010 bases
Position: chr6:11895320-11900329
Accession: 108266861
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000033316	MMR_HSR1	PF01926.23	6.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000034624	-	3433	XM_017470668	ENSIPUP00000033316	230 (aa)	XP_017326157	A0A2D0R6C8

Gene Model

Click here to download ENSIPUG00000022394's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu04140	Autophagy - animal	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000022394's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000022394	zgc:101559	72	42.262	ENSIPUG00000016261	RAB19	73	42.262
ENSIPUG00000022394	zgc:101559	66	40.645	ENSIPUG00000014035	rab9a	76	40.645
ENSIPUG00000022394	zgc:101559	63	33.108	ENSIPUG00000005254	RERG	70	33.108
ENSIPUG00000022394	zgc:101559	64	41.611	ENSIPUG00000021740	rab6a	75	41.611
ENSIPUG00000022394	zgc:101559	89	35.122	ENSIPUG00000015058	rab6b	95	35.122
ENSIPUG00000022394	zgc:101559	86	37.619	ENSIPUG00000015525	-	95	37.619
ENSIPUG00000022394	zgc:101559	75	38.728	ENSIPUG00000019927	rab11bb	78	38.728
ENSIPUG00000022394	zgc:101559	72	30.539	ENSIPUG00000006702	rras	79	30.539
ENSIPUG00000022394	zgc:101559	85	35.859	ENSIPUG00000019237	rab15	91	35.859
ENSIPUG00000022394	zgc:101559	85	62.687	ENSIPUG00000017684	rab33b	86	62.687
ENSIPUG00000022394	zgc:101559	71	35.976	ENSIPUG00000022502	hrasb	90	36.364
ENSIPUG00000022394	zgc:101559	81	35.079	ENSIPUG00000006091	RAB11A	88	35.079
ENSIPUG00000022394	zgc:101559	72	38.788	ENSIPUG00000010859	rab18b	79	38.788
ENSIPUG00000022394	zgc:101559	85	36.275	ENSIPUG00000012218	RAB25	93	36.275
ENSIPUG00000022394	zgc:101559	66	47.403	ENSIPUG00000024203	rab39ba	72	47.403
ENSIPUG00000022394	zgc:101559	72	40.120	ENSIPUG00000007415	rab14	75	40.120
ENSIPUG00000022394	zgc:101559	76	31.461	ENSIPUG00000024568	rheb	94	31.461
ENSIPUG00000022394	zgc:101559	71	48.171	ENSIPUG00000021010	Rab30	79	48.171
ENSIPUG00000022394	zgc:101559	85	39.320	ENSIPUG00000020833	rab39b	96	39.320
ENSIPUG00000022394	zgc:101559	83	30.612	ENSIPUG00000015086	dnajc27	69	30.928
ENSIPUG00000022394	zgc:101559	75	37.572	ENSIPUG00000021401	Rab11a	80	37.572
ENSIPUG00000022394	zgc:101559	83	37.306	ENSIPUG00000010794	rab22a	93	37.306
ENSIPUG00000022394	zgc:101559	74	35.673	ENSIPUG00000004259	kras	93	36.066
ENSIPUG00000022394	zgc:101559	89	38.532	ENSIPUG00000012509	-	97	38.532
ENSIPUG00000022394	zgc:101559	76	39.106	ENSIPUG00000017200	-	85	39.106
ENSIPUG00000022394	zgc:101559	83	36.979	ENSIPUG00000018098	rab6b	90	36.979
ENSIPUG00000022394	zgc:101559	73	40.116	ENSIPUG00000024531	rab34	66	40.116
ENSIPUG00000022394	zgc:101559	72	39.521	ENSIPUG00000007539	rab2a	76	39.521
ENSIPUG00000022394	zgc:101559	71	39.881	ENSIPUG00000022445	RAB7A	79	39.881
ENSIPUG00000022394	zgc:101559	73	46.429	ENSIPUG00000008650	rab1a	81	46.429
ENSIPUG00000022394	zgc:101559	72	39.759	ENSIPUG00000020082	rab5c	76	39.759
ENSIPUG00000022394	zgc:101559	75	33.526	ENSIPUG00000000962	MRAS	81	33.526
ENSIPUG00000022394	zgc:101559	67	30.588	ENSIPUG00000009956	rasl11b	66	30.588
ENSIPUG00000022394	zgc:101559	73	46.429	ENSIPUG00000017890	Rab1A	81	46.429
ENSIPUG00000022394	zgc:101559	67	36.364	ENSIPUG00000016561	rab9b	69	36.364
ENSIPUG00000022394	zgc:101559	71	40.476	ENSIPUG00000007246	rab7a	80	40.476
ENSIPUG00000022394	zgc:101559	85	36.893	ENSIPUG00000011376	rab42a	96	36.893
ENSIPUG00000022394	zgc:101559	79	39.011	ENSIPUG00000023392	rab5a	80	39.011
ENSIPUG00000022394	zgc:101559	85	40.816	ENSIPUG00000011489	Rab35	96	40.816
ENSIPUG00000022394	zgc:101559	59	33.088	ENSIPUG00000016494	rab23	70	33.784
ENSIPUG00000022394	zgc:101559	78	31.579	ENSIPUG00000013954	rasm	90	31.579
ENSIPUG00000022394	zgc:101559	78	35.754	ENSIPUG00000006053	hras	92	35.754
ENSIPUG00000022394	zgc:101559	85	40.816	ENSIPUG00000024622	rab35	96	40.816
ENSIPUG00000022394	zgc:101559	76	38.333	ENSIPUG00000025100	rab11b	78	38.728
ENSIPUG00000022394	zgc:101559	63	41.497	ENSIPUG00000020226	RAB15	71	41.497
ENSIPUG00000022394	zgc:101559	85	37.681	ENSIPUG00000006126	Rab25	94	37.681
ENSIPUG00000022394	zgc:101559	86	40.299	ENSIPUG00000003199	rab13	95	40.299
ENSIPUG00000022394	zgc:101559	82	40.000	ENSIPUG00000017401	rab12	77	39.487
ENSIPUG00000022394	zgc:101559	74	52.023	ENSIPUG00000009784	-	78	52.023
ENSIPUG00000022394	zgc:101559	64	43.624	ENSIPUG00000019382	rab41	77	41.611
ENSIPUG00000022394	zgc:101559	75	33.514	ENSIPUG00000000761	zgc	70	33.514
ENSIPUG00000022394	zgc:101559	79	64.286	ENSIPUG00000014269	rab33a	79	64.286
ENSIPUG00000022394	zgc:101559	51	30.345	ENSIPUG00000012657	rabl3	62	30.345
ENSIPUG00000022394	zgc:101559	73	38.690	ENSIPUG00000018050	RAB31	84	38.690
ENSIPUG00000022394	zgc:101559	73	47.024	ENSIPUG00000020508	rab1ab	81	47.024

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000022394	zgc:101559	89	76.214	ENSAPOG00000007503	zgc:101559	88	76.214	Acanthochromis_polyacanthus
ENSIPUG00000022394	zgc:101559	80	83.152	ENSACIG00000021459	zgc:101559	81	83.152	Amphilophus_citrinellus
ENSIPUG00000022394	zgc:101559	100	70.085	ENSAOCG00000024675	zgc:101559	100	70.085	Amphiprion_ocellaris
ENSIPUG00000022394	zgc:101559	100	70.085	ENSAPEG00000005176	zgc:101559	100	70.085	Amphiprion_percula
ENSIPUG00000022394	zgc:101559	93	74.537	ENSATEG00000007761	zgc:101559	92	74.537	Anabas_testudineus
ENSIPUG00000022394	zgc:101559	100	69.957	ENSACLG00000027006	zgc:101559	99	69.957	Astatotilapia_calliptera
ENSIPUG00000022394	zgc:101559	100	83.043	ENSAMXG00000040460	zgc:101559	94	83.043	Astyanax_mexicanus
ENSIPUG00000022394	zgc:101559	88	77.073	ENSCSEG00000006243	zgc:101559	88	77.073	Cynoglossus_semilaevis
ENSIPUG00000022394	zgc:101559	91	74.286	ENSCVAG00000019227	zgc:101559	90	74.286	Cyprinodon_variegatus
ENSIPUG00000022394	zgc:101559	100	76.395	ENSDARG00000003257	zgc:101559	100	76.395	Danio_rerio
ENSIPUG00000022394	zgc:101559	91	73.810	ENSFHEG00000011483	zgc:101559	90	73.810	Fundulus_heteroclitus
ENSIPUG00000022394	zgc:101559	86	78.894	ENSGMOG00000011665	zgc:101559	94	78.894	Gadus_morhua
ENSIPUG00000022394	zgc:101559	93	70.833	ENSGAFG00000021202	zgc:101559	92	70.833	Gambusia_affinis
ENSIPUG00000022394	zgc:101559	91	71.362	ENSGACG00000001725	zgc:101559	91	71.362	Gasterosteus_aculeatus
ENSIPUG00000022394	zgc:101559	100	70.085	ENSHBUG00000007827	zgc:101559	100	70.085	Haplochromis_burtoni
ENSIPUG00000022394	zgc:101559	88	72.683	ENSHCOG00000009133	zgc:101559	100	66.949	Hippocampus_comes
ENSIPUG00000022394	zgc:101559	88	76.585	ENSKMAG00000002862	zgc:101559	87	76.585	Kryptolebias_marmoratus
ENSIPUG00000022394	zgc:101559	100	70.940	ENSLBEG00000025798	zgc:101559	100	70.940	Labrus_bergylta
ENSIPUG00000022394	zgc:101559	87	67.662	ENSLACG00000011557	zgc:101559	87	67.662	Latimeria_chalumnae
ENSIPUG00000022394	zgc:101559	88	77.451	ENSLOCG00000005904	zgc:101559	87	77.451	Lepisosteus_oculatus
ENSIPUG00000022394	zgc:101559	92	75.926	ENSMAMG00000017431	zgc:101559	92	75.926	Mastacembelus_armatus
ENSIPUG00000022394	zgc:101559	100	70.085	ENSMZEG00005021778	zgc:101559	100	70.085	Maylandia_zebra
ENSIPUG00000022394	zgc:101559	100	68.803	ENSMMOG00000019779	zgc:101559	100	68.803	Mola_mola
ENSIPUG00000022394	zgc:101559	88	75.122	ENSMALG00000003712	zgc:101559	88	75.122	Monopterus_albus
ENSIPUG00000022394	zgc:101559	100	70.085	ENSNBRG00000002684	zgc:101559	100	70.085	Neolamprologus_brichardi
ENSIPUG00000022394	zgc:101559	100	70.085	ENSONIG00000006715	-	100	70.085	Oreochromis_niloticus
ENSIPUG00000022394	zgc:101559	87	75.124	ENSORLG00000030642	zgc:101559	86	75.124	Oryzias_latipes
ENSIPUG00000022394	zgc:101559	100	69.099	ENSORLG00020012685	zgc:101559	100	69.099	Oryzias_latipes_hni
ENSIPUG00000022394	zgc:101559	87	74.627	ENSORLG00015016047	zgc:101559	86	74.627	Oryzias_latipes_hsok
ENSIPUG00000022394	zgc:101559	100	68.240	ENSOMEG00000013128	zgc:101559	100	68.240	Oryzias_melastigma
ENSIPUG00000022394	zgc:101559	95	72.973	ENSPKIG00000013397	zgc:101559	94	72.973	Paramormyrops_kingsleyae
ENSIPUG00000022394	zgc:101559	93	72.222	ENSPFOG00000009101	-	92	72.222	Poecilia_formosa
ENSIPUG00000022394	zgc:101559	93	72.558	ENSPLAG00000020627	zgc:101559	91	72.558	Poecilia_latipinna
ENSIPUG00000022394	zgc:101559	93	73.148	ENSPMEG00000010152	zgc:101559	92	73.148	Poecilia_mexicana
ENSIPUG00000022394	zgc:101559	93	71.759	ENSPREG00000007017	zgc:101559	92	71.759	Poecilia_reticulata
ENSIPUG00000022394	zgc:101559	100	70.085	ENSPNYG00000012922	zgc:101559	100	70.085	Pundamilia_nyererei
ENSIPUG00000022394	zgc:101559	100	84.783	ENSPNAG00000017856	zgc:101559	100	84.783	Pygocentrus_nattereri
ENSIPUG00000022394	zgc:101559	95	70.852	ENSSFOG00015006175	zgc:101559	96	70.852	Scleropages_formosus
ENSIPUG00000022394	zgc:101559	89	72.683	ENSSMAG00000002229	zgc:101559	87	72.683	Scophthalmus_maximus
ENSIPUG00000022394	zgc:101559	92	75.463	ENSSDUG00000008151	zgc:101559	92	75.463	Seriola_dumerili
ENSIPUG00000022394	zgc:101559	100	71.368	ENSSLDG00000019214	zgc:101559	100	71.368	Seriola_lalandi_dorsalis
ENSIPUG00000022394	zgc:101559	100	70.513	ENSSPAG00000006404	zgc:101559	100	70.513	Stegastes_partitus
ENSIPUG00000022394	zgc:101559	100	67.949	ENSTRUG00000009903	zgc:101559	100	67.949	Takifugu_rubripes
ENSIPUG00000022394	zgc:101559	91	72.170	ENSTNIG00000015000	zgc:101559	87	73.786	Tetraodon_nigroviridis
ENSIPUG00000022394	zgc:101559	93	72.222	ENSXCOG00000018683	zgc:101559	92	72.222	Xiphophorus_couchianus
ENSIPUG00000022394	zgc:101559	93	73.148	ENSXMAG00000011171	zgc:101559	92	73.148	Xiphophorus_maculatus