EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000022587 (Gene tree)
Gene ID: 108272802
Gene Symbol: Utp6
Alias: zgc:55648
Full Name: UTP6%2C small subunit processome component
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 14637 bases
Position: chr12:11542585-11557221
Accession: 108272802
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000033704	U3_assoc_6	PF08640.11	7.4e-25	1	1
ENSIPUP00000033699	U3_assoc_6	PF08640.11	7.4e-25	1	1
ENSIPUP00000033684	U3_assoc_6	PF08640.11	7.5e-25	1	1
ENSIPUP00000033665	U3_assoc_6	PF08640.11	7.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000035028	-	1746	-	ENSIPUP00000033704	581 (aa)	-	-
ENSIPUT00000035022	-	1752	-	ENSIPUP00000033699	583 (aa)	-	-
ENSIPUT00000034990	-	5406	XM_017481551	ENSIPUP00000033665	594 (aa)	XP_017337040	W5UE51
ENSIPUT00000035008	-	5145	-	ENSIPUP00000033684	589 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000022587's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000022587's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000022587	Utp6	100	54.849	ENSG00000108651	UTP6	100	54.849	Homo_sapiens
ENSIPUG00000022587	Utp6	100	71.261	ENSAPOG00000000435	utp6	100	71.261	Acanthochromis_polyacanthus
ENSIPUG00000022587	Utp6	99	54.530	ENSAMEG00000005443	UTP6	99	54.530	Ailuropoda_melanoleuca
ENSIPUG00000022587	Utp6	100	68.235	ENSACIG00000004124	utp6	100	68.235	Amphilophus_citrinellus
ENSIPUG00000022587	Utp6	100	70.420	ENSAOCG00000016812	utp6	100	70.420	Amphiprion_ocellaris
ENSIPUG00000022587	Utp6	100	70.588	ENSAPEG00000023565	utp6	100	70.588	Amphiprion_percula
ENSIPUG00000022587	Utp6	100	71.597	ENSATEG00000003401	utp6	100	71.597	Anabas_testudineus
ENSIPUG00000022587	Utp6	99	57.046	ENSAPLG00000005821	UTP6	99	57.046	Anas_platyrhynchos
ENSIPUG00000022587	Utp6	100	60.134	ENSACAG00000009472	UTP6	100	60.134	Anolis_carolinensis
ENSIPUG00000022587	Utp6	100	54.348	ENSANAG00000034603	UTP6	100	54.348	Aotus_nancymaae
ENSIPUG00000022587	Utp6	100	71.765	ENSACLG00000006728	utp6	100	71.765	Astatotilapia_calliptera
ENSIPUG00000022587	Utp6	100	81.313	ENSAMXG00000009478	utp6	100	81.313	Astyanax_mexicanus
ENSIPUG00000022587	Utp6	99	51.613	ENSBTAG00000003769	-	98	51.591	Bos_taurus
ENSIPUG00000022587	Utp6	100	53.088	ENSBTAG00000015612	UTP6	100	53.088	Bos_taurus
ENSIPUG00000022587	Utp6	100	54.682	ENSCJAG00000014115	UTP6	100	54.682	Callithrix_jacchus
ENSIPUG00000022587	Utp6	100	55.092	ENSCAFG00000018507	UTP6	100	55.092	Canis_familiaris
ENSIPUG00000022587	Utp6	100	55.092	ENSCAFG00020014678	UTP6	100	55.092	Canis_lupus_dingo
ENSIPUG00000022587	Utp6	100	52.755	ENSCHIG00000009726	-	100	52.755	Capra_hircus
ENSIPUG00000022587	Utp6	100	52.755	ENSCHIG00000017954	-	100	52.755	Capra_hircus
ENSIPUG00000022587	Utp6	99	49.833	ENSTSYG00000002202	UTP6	99	49.833	Carlito_syrichta
ENSIPUG00000022587	Utp6	87	49.709	ENSCAPG00000017595	UTP6	93	50.485	Cavia_aperea
ENSIPUG00000022587	Utp6	99	55.779	ENSCPOG00000014294	UTP6	100	55.779	Cavia_porcellus
ENSIPUG00000022587	Utp6	100	51.783	ENSCCAG00000033318	-	100	51.783	Cebus_capucinus
ENSIPUG00000022587	Utp6	100	54.257	ENSCATG00000034868	UTP6	100	54.257	Cercocebus_atys
ENSIPUG00000022587	Utp6	99	55.444	ENSCLAG00000007274	UTP6	99	55.444	Chinchilla_lanigera
ENSIPUG00000022587	Utp6	100	54.348	ENSCSAG00000006595	UTP6	100	54.348	Chlorocebus_sabaeus
ENSIPUG00000022587	Utp6	73	45.679	ENSCHOG00000010940	-	73	45.679	Choloepus_hoffmanni
ENSIPUG00000022587	Utp6	100	60.134	ENSCPBG00000004652	UTP6	100	60.134	Chrysemys_picta_bellii
ENSIPUG00000022587	Utp6	54	34.663	ENSCSAVG00000011416	-	99	34.663	Ciona_savignyi
ENSIPUG00000022587	Utp6	89	39.114	ENSCANG00000031141	UTP6	91	39.114	Colobus_angolensis_palliatus
ENSIPUG00000022587	Utp6	99	54.941	ENSCGRG00001000046	Utp6	100	54.941	Cricetulus_griseus_chok1gshd
ENSIPUG00000022587	Utp6	95	54.064	ENSCGRG00000011543	Utp6	100	54.064	Cricetulus_griseus_crigri
ENSIPUG00000022587	Utp6	100	65.327	ENSCSEG00000013422	utp6	100	77.049	Cynoglossus_semilaevis
ENSIPUG00000022587	Utp6	100	69.849	ENSCVAG00000020322	utp6	100	69.849	Cyprinodon_variegatus
ENSIPUG00000022587	Utp6	100	76.431	ENSDARG00000098433	utp6	100	86.188	Danio_rerio
ENSIPUG00000022587	Utp6	100	55.426	ENSDNOG00000037018	UTP6	100	55.426	Dasypus_novemcinctus
ENSIPUG00000022587	Utp6	92	56.801	ENSDORG00000003843	Utp6	99	56.618	Dipodomys_ordii
ENSIPUG00000022587	Utp6	100	55.259	ENSEASG00005010870	UTP6	100	55.259	Equus_asinus_asinus
ENSIPUG00000022587	Utp6	100	55.092	ENSECAG00000022217	UTP6	100	55.092	Equus_caballus
ENSIPUG00000022587	Utp6	100	71.380	ENSELUG00000006618	utp6	100	71.380	Esox_lucius
ENSIPUG00000022587	Utp6	100	53.333	ENSFCAG00000015795	UTP6	100	52.970	Felis_catus
ENSIPUG00000022587	Utp6	100	59.129	ENSFALG00000002282	UTP6	100	59.129	Ficedula_albicollis
ENSIPUG00000022587	Utp6	99	54.774	ENSFDAG00000019506	UTP6	100	54.774	Fukomys_damarensis
ENSIPUG00000022587	Utp6	100	69.244	ENSFHEG00000010373	utp6	100	69.244	Fundulus_heteroclitus
ENSIPUG00000022587	Utp6	100	66.891	ENSGMOG00000011958	utp6	100	66.891	Gadus_morhua
ENSIPUG00000022587	Utp6	100	59.966	ENSGALG00000003260	UTP6	100	59.966	Gallus_gallus
ENSIPUG00000022587	Utp6	100	70.924	ENSGAFG00000008505	utp6	100	70.924	Gambusia_affinis
ENSIPUG00000022587	Utp6	100	69.916	ENSGACG00000019424	utp6	100	69.916	Gasterosteus_aculeatus
ENSIPUG00000022587	Utp6	100	58.961	ENSGAGG00000004820	UTP6	100	58.961	Gopherus_agassizii
ENSIPUG00000022587	Utp6	100	55.184	ENSGGOG00000013569	UTP6	100	55.184	Gorilla_gorilla
ENSIPUG00000022587	Utp6	100	44.741	ENSGGOG00000026003	-	100	44.574	Gorilla_gorilla
ENSIPUG00000022587	Utp6	100	71.765	ENSHBUG00000018668	utp6	100	71.765	Haplochromis_burtoni
ENSIPUG00000022587	Utp6	99	51.771	ENSHGLG00000008642	-	99	51.771	Heterocephalus_glaber_female
ENSIPUG00000022587	Utp6	99	55.444	ENSHGLG00000010332	UTP6	100	55.444	Heterocephalus_glaber_female
ENSIPUG00000022587	Utp6	99	52.931	ENSHGLG00100014271	-	100	52.931	Heterocephalus_glaber_male
ENSIPUG00000022587	Utp6	96	53.169	ENSHGLG00100006047	-	99	53.169	Heterocephalus_glaber_male
ENSIPUG00000022587	Utp6	100	66.555	ENSHCOG00000017277	utp6	100	66.555	Hippocampus_comes
ENSIPUG00000022587	Utp6	99	56.020	ENSSTOG00000015875	UTP6	100	56.020	Ictidomys_tridecemlineatus
ENSIPUG00000022587	Utp6	100	70.420	ENSKMAG00000021631	utp6	100	70.420	Kryptolebias_marmoratus
ENSIPUG00000022587	Utp6	100	71.429	ENSLBEG00000002115	utp6	100	71.429	Labrus_bergylta
ENSIPUG00000022587	Utp6	100	61.642	ENSLACG00000017158	UTP6	100	61.642	Latimeria_chalumnae
ENSIPUG00000022587	Utp6	92	69.725	ENSLOCG00000013797	utp6	90	69.725	Lepisosteus_oculatus
ENSIPUG00000022587	Utp6	100	55.259	ENSLAFG00000013008	UTP6	100	55.259	Loxodonta_africana
ENSIPUG00000022587	Utp6	80	45.918	ENSMFAG00000041904	-	87	46.237	Macaca_fascicularis
ENSIPUG00000022587	Utp6	100	54.257	ENSMFAG00000038842	UTP6	100	54.257	Macaca_fascicularis
ENSIPUG00000022587	Utp6	100	54.257	ENSMMUG00000020403	UTP6	100	54.257	Macaca_mulatta
ENSIPUG00000022587	Utp6	100	54.257	ENSMNEG00000039480	UTP6	100	54.257	Macaca_nemestrina
ENSIPUG00000022587	Utp6	99	41.946	ENSMLEG00000039364	-	99	41.779	Mandrillus_leucophaeus
ENSIPUG00000022587	Utp6	100	46.912	ENSMLEG00000032174	UTP6	100	46.922	Mandrillus_leucophaeus
ENSIPUG00000022587	Utp6	100	70.252	ENSMAMG00000002228	utp6	99	70.252	Mastacembelus_armatus
ENSIPUG00000022587	Utp6	100	71.765	ENSMZEG00005023895	utp6	100	71.765	Maylandia_zebra
ENSIPUG00000022587	Utp6	95	59.331	ENSMGAG00000008111	UTP6	100	59.331	Meleagris_gallopavo
ENSIPUG00000022587	Utp6	99	55.444	ENSMAUG00000021895	Utp6	100	55.444	Mesocricetus_auratus
ENSIPUG00000022587	Utp6	100	54.013	ENSMICG00000002632	UTP6	100	54.013	Microcebus_murinus
ENSIPUG00000022587	Utp6	99	53.936	ENSMOCG00000014163	Utp6	100	53.936	Microtus_ochrogaster
ENSIPUG00000022587	Utp6	100	67.395	ENSMMOG00000008653	utp6	100	71.186	Mola_mola
ENSIPUG00000022587	Utp6	100	58.528	ENSMODG00000019206	UTP6	100	58.528	Monodelphis_domestica
ENSIPUG00000022587	Utp6	100	70.588	ENSMALG00000021112	utp6	100	70.588	Monopterus_albus
ENSIPUG00000022587	Utp6	99	55.779	MGP_CAROLIEiJ_G0016828	Utp6	100	55.779	Mus_caroli
ENSIPUG00000022587	Utp6	99	55.611	ENSMUSG00000035575	Utp6	100	55.611	Mus_musculus
ENSIPUG00000022587	Utp6	99	50.419	MGP_PahariEiJ_G0017965	Utp6	100	50.419	Mus_pahari
ENSIPUG00000022587	Utp6	99	55.611	MGP_SPRETEiJ_G0017672	Utp6	100	55.611	Mus_spretus
ENSIPUG00000022587	Utp6	100	53.099	ENSMPUG00000014581	UTP6	100	53.099	Mustela_putorius_furo
ENSIPUG00000022587	Utp6	100	54.758	ENSMLUG00000016422	UTP6	100	54.758	Myotis_lucifugus
ENSIPUG00000022587	Utp6	99	55.779	ENSNGAG00000015482	Utp6	100	55.779	Nannospalax_galili
ENSIPUG00000022587	Utp6	100	71.597	ENSNBRG00000019714	utp6	100	71.597	Neolamprologus_brichardi
ENSIPUG00000022587	Utp6	100	53.679	ENSNLEG00000011009	UTP6	100	53.679	Nomascus_leucogenys
ENSIPUG00000022587	Utp6	88	52.482	ENSOPRG00000008446	-	89	52.482	Ochotona_princeps
ENSIPUG00000022587	Utp6	67	58.650	ENSODEG00000011971	UTP6	98	58.650	Octodon_degus
ENSIPUG00000022587	Utp6	100	70.924	ENSONIG00000018090	utp6	100	70.924	Oreochromis_niloticus
ENSIPUG00000022587	Utp6	98	55.952	ENSOANG00000004279	UTP6	99	55.952	Ornithorhynchus_anatinus
ENSIPUG00000022587	Utp6	99	54.348	ENSOCUG00000016980	UTP6	99	54.348	Oryctolagus_cuniculus
ENSIPUG00000022587	Utp6	99	71.044	ENSORLG00000003546	utp6	64	71.044	Oryzias_latipes
ENSIPUG00000022587	Utp6	99	71.044	ENSORLG00020010377	utp6	99	71.044	Oryzias_latipes_hni
ENSIPUG00000022587	Utp6	99	70.539	ENSORLG00015008893	utp6	99	70.539	Oryzias_latipes_hsok
ENSIPUG00000022587	Utp6	100	70.252	ENSOMEG00000017487	utp6	100	70.252	Oryzias_melastigma
ENSIPUG00000022587	Utp6	88	47.238	ENSOGAG00000004511	UTP6	100	47.238	Otolemur_garnettii
ENSIPUG00000022587	Utp6	100	52.922	ENSOARG00000013474	UTP6	100	52.922	Ovis_aries
ENSIPUG00000022587	Utp6	100	55.017	ENSPPAG00000038089	UTP6	100	55.017	Pan_paniscus
ENSIPUG00000022587	Utp6	100	44.799	ENSPPAG00000016895	-	100	44.631	Pan_paniscus
ENSIPUG00000022587	Utp6	100	55.259	ENSPPRG00000001010	UTP6	100	55.259	Panthera_pardus
ENSIPUG00000022587	Utp6	100	55.259	ENSPTIG00000013913	UTP6	100	55.259	Panthera_tigris_altaica
ENSIPUG00000022587	Utp6	100	44.966	ENSPTRG00000044798	-	100	44.966	Pan_troglodytes
ENSIPUG00000022587	Utp6	100	55.017	ENSPTRG00000008977	UTP6	100	55.017	Pan_troglodytes
ENSIPUG00000022587	Utp6	100	52.500	ENSPANG00000023113	UTP6	100	52.500	Papio_anubis
ENSIPUG00000022587	Utp6	99	42.061	ENSPANG00000034274	-	99	41.892	Papio_anubis
ENSIPUG00000022587	Utp6	100	72.074	ENSPKIG00000004653	utp6	100	72.074	Paramormyrops_kingsleyae
ENSIPUG00000022587	Utp6	100	58.992	ENSPSIG00000012435	UTP6	100	58.992	Pelodiscus_sinensis
ENSIPUG00000022587	Utp6	100	68.908	ENSPMGG00000009548	utp6	100	68.908	Periophthalmus_magnuspinnatus
ENSIPUG00000022587	Utp6	99	54.606	ENSPEMG00000014081	Utp6	100	54.606	Peromyscus_maniculatus_bairdii
ENSIPUG00000022587	Utp6	93	45.567	ENSPMAG00000009561	utp6	100	45.567	Petromyzon_marinus
ENSIPUG00000022587	Utp6	100	60.804	ENSPCIG00000029968	UTP6	86	60.804	Phascolarctos_cinereus
ENSIPUG00000022587	Utp6	100	70.924	ENSPFOG00000013918	utp6	100	70.924	Poecilia_formosa
ENSIPUG00000022587	Utp6	100	70.588	ENSPLAG00000017825	utp6	100	70.588	Poecilia_latipinna
ENSIPUG00000022587	Utp6	100	71.261	ENSPMEG00000008133	utp6	100	71.261	Poecilia_mexicana
ENSIPUG00000022587	Utp6	100	68.403	ENSPREG00000013108	utp6	99	68.403	Poecilia_reticulata
ENSIPUG00000022587	Utp6	100	52.508	ENSPPYG00000008154	UTP6	100	52.508	Pongo_abelii
ENSIPUG00000022587	Utp6	100	54.424	ENSPCOG00000010224	UTP6	100	54.424	Propithecus_coquereli
ENSIPUG00000022587	Utp6	100	51.753	ENSPVAG00000015759	UTP6	100	51.753	Pteropus_vampyrus
ENSIPUG00000022587	Utp6	100	71.429	ENSPNYG00000002290	utp6	100	71.429	Pundamilia_nyererei
ENSIPUG00000022587	Utp6	100	78.788	ENSPNAG00000027370	utp6	100	78.788	Pygocentrus_nattereri
ENSIPUG00000022587	Utp6	99	54.271	ENSRNOG00000014209	Utp6	100	54.271	Rattus_norvegicus
ENSIPUG00000022587	Utp6	100	54.090	ENSRBIG00000020822	UTP6	100	54.090	Rhinopithecus_bieti
ENSIPUG00000022587	Utp6	100	54.090	ENSRROG00000036838	UTP6	100	54.090	Rhinopithecus_roxellana
ENSIPUG00000022587	Utp6	100	69.732	ENSSFOG00015005978	utp6	100	69.732	Scleropages_formosus
ENSIPUG00000022587	Utp6	100	70.588	ENSSMAG00000014772	utp6	100	70.588	Scophthalmus_maximus
ENSIPUG00000022587	Utp6	100	71.765	ENSSDUG00000000329	utp6	100	71.765	Seriola_dumerili
ENSIPUG00000022587	Utp6	100	70.924	ENSSLDG00000016724	utp6	100	70.924	Seriola_lalandi_dorsalis
ENSIPUG00000022587	Utp6	99	48.074	ENSSARG00000010778	UTP6	99	48.074	Sorex_araneus
ENSIPUG00000022587	Utp6	100	59.296	ENSSPUG00000005273	UTP6	100	59.296	Sphenodon_punctatus
ENSIPUG00000022587	Utp6	100	70.084	ENSSPAG00000011871	utp6	99	70.084	Stegastes_partitus
ENSIPUG00000022587	Utp6	100	55.593	ENSSSCG00000017745	UTP6	100	55.593	Sus_scrofa
ENSIPUG00000022587	Utp6	100	58.626	ENSTGUG00000004999	UTP6	100	58.626	Taeniopygia_guttata
ENSIPUG00000022587	Utp6	99	66.835	ENSTRUG00000012005	utp6	100	66.835	Takifugu_rubripes
ENSIPUG00000022587	Utp6	99	67.340	ENSTNIG00000003235	utp6	100	67.340	Tetraodon_nigroviridis
ENSIPUG00000022587	Utp6	68	53.591	ENSTBEG00000005388	-	64	53.591	Tupaia_belangeri
ENSIPUG00000022587	Utp6	100	54.591	ENSTTRG00000009911	UTP6	100	54.591	Tursiops_truncatus
ENSIPUG00000022587	Utp6	99	54.698	ENSUMAG00000015139	UTP6	99	54.698	Ursus_maritimus
ENSIPUG00000022587	Utp6	100	55.184	ENSVPAG00000005782	UTP6	100	55.184	Vicugna_pacos
ENSIPUG00000022587	Utp6	100	55.259	ENSVVUG00000012238	UTP6	100	55.259	Vulpes_vulpes
ENSIPUG00000022587	Utp6	100	49.749	ENSXETG00000020057	utp6	100	49.749	Xenopus_tropicalis
ENSIPUG00000022587	Utp6	100	70.352	ENSXCOG00000013626	utp6	100	81.944	Xiphophorus_couchianus
ENSIPUG00000022587	Utp6	100	70.588	ENSXMAG00000017414	utp6	100	70.588	Xiphophorus_maculatus