EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000022617 (Gene tree)
Gene ID: 108272132
Gene Symbol: chd1l
Alias: zgc:56084
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 25090 bases
Position: chr11:2477860-2502949
Accession: 108272132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000033655	ResIII	PF04851.15	4.6e-07	1	1
ENSIPUP00000033676	ResIII	PF04851.15	7.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000034979	-	6325	XM_017480339	ENSIPUP00000033655	1024 (aa)	XP_017335828	A0A2D0RZ99
ENSIPUT00000035000	-	3063	-	ENSIPUP00000033676	1020 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000022617's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000022617's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000022617	chd1l	53	42.730	ENSIPUG00000016905	Smarca1	51	45.726
ENSIPUG00000022617	chd1l	53	43.590	ENSIPUG00000005229	SMARCA5	54	43.934

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000022617	chd1l	84	60.395	ENSG00000131778	CHD1L	100	61.551	Homo_sapiens
ENSIPUG00000022617	chd1l	97	66.332	ENSAPOG00000001539	chd1l	99	68.614	Acanthochromis_polyacanthus
ENSIPUG00000022617	chd1l	87	59.618	ENSAMEG00000017063	CHD1L	98	60.384	Ailuropoda_melanoleuca
ENSIPUG00000022617	chd1l	83	68.347	ENSACIG00000001164	chd1l	99	67.429	Amphilophus_citrinellus
ENSIPUG00000022617	chd1l	99	65.366	ENSAOCG00000014510	chd1l	99	65.366	Amphiprion_ocellaris
ENSIPUG00000022617	chd1l	85	65.938	ENSAPEG00000017450	chd1l	95	66.975	Amphiprion_percula
ENSIPUG00000022617	chd1l	85	66.781	ENSAPEG00000017573	chd1l	96	66.667	Amphiprion_percula
ENSIPUG00000022617	chd1l	100	63.981	ENSATEG00000013058	chd1l	100	63.981	Anabas_testudineus
ENSIPUG00000022617	chd1l	83	60.638	ENSAPLG00000009976	CHD1L	95	60.698	Anas_platyrhynchos
ENSIPUG00000022617	chd1l	85	58.929	ENSACAG00000017686	CHD1L	100	58.443	Anolis_carolinensis
ENSIPUG00000022617	chd1l	83	61.629	ENSANAG00000024347	CHD1L	96	60.624	Aotus_nancymaae
ENSIPUG00000022617	chd1l	94	66.046	ENSACLG00000019304	chd1l	96	68.535	Astatotilapia_calliptera
ENSIPUG00000022617	chd1l	100	65.467	ENSAMXG00000012367	chd1l	100	64.883	Astyanax_mexicanus
ENSIPUG00000022617	chd1l	86	60.160	ENSBTAG00000020831	CHD1L	97	60.710	Bos_taurus
ENSIPUG00000022617	chd1l	84	60.956	ENSCJAG00000002406	CHD1L	97	60.321	Callithrix_jacchus
ENSIPUG00000022617	chd1l	85	59.127	ENSCAFG00000010944	CHD1L	97	59.127	Canis_familiaris
ENSIPUG00000022617	chd1l	87	58.903	ENSCAFG00020020121	CHD1L	97	60.731	Canis_lupus_dingo
ENSIPUG00000022617	chd1l	86	60.274	ENSCHIG00000013871	CHD1L	97	60.068	Capra_hircus
ENSIPUG00000022617	chd1l	82	61.502	ENSTSYG00000003005	CHD1L	100	60.514	Carlito_syrichta
ENSIPUG00000022617	chd1l	85	58.977	ENSCPOG00000009000	CHD1L	99	58.166	Cavia_porcellus
ENSIPUG00000022617	chd1l	84	59.441	ENSCCAG00000036079	CHD1L	97	58.830	Cebus_capucinus
ENSIPUG00000022617	chd1l	84	60.723	ENSCATG00000031044	CHD1L	97	59.863	Cercocebus_atys
ENSIPUG00000022617	chd1l	85	61.054	ENSCLAG00000000880	CHD1L	99	60.316	Chinchilla_lanigera
ENSIPUG00000022617	chd1l	84	60.839	ENSCSAG00000018386	CHD1L	97	59.977	Chlorocebus_sabaeus
ENSIPUG00000022617	chd1l	86	61.003	ENSCPBG00000002600	CHD1L	99	60.787	Chrysemys_picta_bellii
ENSIPUG00000022617	chd1l	84	60.023	ENSCANG00000020239	CHD1L	97	59.205	Colobus_angolensis_palliatus
ENSIPUG00000022617	chd1l	85	59.611	ENSCGRG00001021624	Chd1l	99	59.707	Cricetulus_griseus_chok1gshd
ENSIPUG00000022617	chd1l	81	61.705	ENSCGRG00000007554	Chd1l	99	60.849	Cricetulus_griseus_crigri
ENSIPUG00000022617	chd1l	94	65.217	ENSCVAG00000002595	chd1l	97	65.041	Cyprinodon_variegatus
ENSIPUG00000022617	chd1l	99	71.902	ENSDARG00000015471	chd1l	99	72.293	Danio_rerio
ENSIPUG00000022617	chd1l	87	59.371	ENSDNOG00000019504	CHD1L	98	60.248	Dasypus_novemcinctus
ENSIPUG00000022617	chd1l	85	59.615	ENSDORG00000013555	Chd1l	98	59.478	Dipodomys_ordii
ENSIPUG00000022617	chd1l	78	59.788	ENSETEG00000008445	CHD1L	88	58.938	Echinops_telfairi
ENSIPUG00000022617	chd1l	65	50.469	ENSEBUG00000005791	chd1l	85	50.575	Eptatretus_burgeri
ENSIPUG00000022617	chd1l	85	60.690	ENSEASG00005007364	CHD1L	99	61.652	Equus_asinus_asinus
ENSIPUG00000022617	chd1l	85	60.575	ENSECAG00000008915	CHD1L	99	61.529	Equus_caballus
ENSIPUG00000022617	chd1l	100	55.727	ENSELUG00000016844	chd1l	99	56.004	Esox_lucius
ENSIPUG00000022617	chd1l	86	60.091	ENSFCAG00000007777	CHD1L	99	59.777	Felis_catus
ENSIPUG00000022617	chd1l	87	58.296	ENSFALG00000006087	CHD1L	98	59.055	Ficedula_albicollis
ENSIPUG00000022617	chd1l	82	61.859	ENSFDAG00000012431	CHD1L	99	61.007	Fukomys_damarensis
ENSIPUG00000022617	chd1l	99	64.712	ENSFHEG00000012420	chd1l	100	64.286	Fundulus_heteroclitus
ENSIPUG00000022617	chd1l	87	59.596	ENSGALG00000015038	CHD1L	99	60.517	Gallus_gallus
ENSIPUG00000022617	chd1l	99	64.500	ENSGAFG00000018198	chd1l	99	66.474	Gambusia_affinis
ENSIPUG00000022617	chd1l	50	70.370	ENSGACG00000014042	chd1l	98	70.370	Gasterosteus_aculeatus
ENSIPUG00000022617	chd1l	85	61.034	ENSGAGG00000014432	CHD1L	99	60.800	Gopherus_agassizii
ENSIPUG00000022617	chd1l	84	59.814	ENSGGOG00000001067	CHD1L	97	59.725	Gorilla_gorilla
ENSIPUG00000022617	chd1l	94	66.046	ENSHBUG00000007464	chd1l	98	68.457	Haplochromis_burtoni
ENSIPUG00000022617	chd1l	84	59.606	ENSHGLG00000008933	CHD1L	98	59.863	Heterocephalus_glaber_female
ENSIPUG00000022617	chd1l	82	59.811	ENSHGLG00100007155	CHD1L	100	58.933	Heterocephalus_glaber_male
ENSIPUG00000022617	chd1l	82	66.627	ENSHCOG00000012787	chd1l	92	66.667	Hippocampus_comes
ENSIPUG00000022617	chd1l	86	54.955	ENSSTOG00000007032	CHD1L	98	54.802	Ictidomys_tridecemlineatus
ENSIPUG00000022617	chd1l	100	64.500	ENSKMAG00000014358	chd1l	100	64.341	Kryptolebias_marmoratus
ENSIPUG00000022617	chd1l	100	65.310	ENSLBEG00000023845	chd1l	96	69.249	Labrus_bergylta
ENSIPUG00000022617	chd1l	99	53.578	ENSLACG00000006262	CHD1L	99	53.571	Latimeria_chalumnae
ENSIPUG00000022617	chd1l	99	62.865	ENSLOCG00000010574	chd1l	99	62.840	Lepisosteus_oculatus
ENSIPUG00000022617	chd1l	83	59.742	ENSLAFG00000018136	CHD1L	99	60.685	Loxodonta_africana
ENSIPUG00000022617	chd1l	83	60.900	ENSMFAG00000043562	CHD1L	100	60.749	Macaca_fascicularis
ENSIPUG00000022617	chd1l	84	60.839	ENSMMUG00000009024	CHD1L	97	59.977	Macaca_mulatta
ENSIPUG00000022617	chd1l	84	60.839	ENSMNEG00000039905	CHD1L	97	59.977	Macaca_nemestrina
ENSIPUG00000022617	chd1l	84	60.839	ENSMLEG00000030900	CHD1L	97	59.977	Mandrillus_leucophaeus
ENSIPUG00000022617	chd1l	99	64.620	ENSMAMG00000012822	chd1l	100	65.714	Mastacembelus_armatus
ENSIPUG00000022617	chd1l	94	66.149	ENSMZEG00005020830	chd1l	95	65.975	Maylandia_zebra
ENSIPUG00000022617	chd1l	84	60.233	ENSMGAG00000014304	CHD1L	100	61.027	Meleagris_gallopavo
ENSIPUG00000022617	chd1l	86	60.388	ENSMICG00000002497	CHD1L	98	60.335	Microcebus_murinus
ENSIPUG00000022617	chd1l	87	58.915	ENSMOCG00000006305	Chd1l	99	59.643	Microtus_ochrogaster
ENSIPUG00000022617	chd1l	86	64.626	ENSMMOG00000005964	chd1l	92	64.733	Mola_mola
ENSIPUG00000022617	chd1l	87	59.753	ENSMODG00000018717	CHD1L	99	59.753	Monodelphis_domestica
ENSIPUG00000022617	chd1l	99	63.938	ENSMALG00000014675	chd1l	99	63.938	Monopterus_albus
ENSIPUG00000022617	chd1l	87	59.910	MGP_CAROLIEiJ_G0025401	Chd1l	99	59.910	Mus_caroli
ENSIPUG00000022617	chd1l	86	59.752	ENSMUSG00000028089	Chd1l	99	59.441	Mus_musculus
ENSIPUG00000022617	chd1l	87	60.494	MGP_PahariEiJ_G0026845	Chd1l	99	60.722	Mus_pahari
ENSIPUG00000022617	chd1l	86	60.410	MGP_SPRETEiJ_G0026347	Chd1l	99	60.090	Mus_spretus
ENSIPUG00000022617	chd1l	88	59.645	ENSMPUG00000000615	CHD1L	99	60.135	Mustela_putorius_furo
ENSIPUG00000022617	chd1l	83	59.883	ENSMLUG00000007573	CHD1L	97	58.241	Myotis_lucifugus
ENSIPUG00000022617	chd1l	84	56.307	ENSNGAG00000000908	Chd1l	98	57.044	Nannospalax_galili
ENSIPUG00000022617	chd1l	85	65.678	ENSNBRG00000006021	chd1l	95	66.247	Neolamprologus_brichardi
ENSIPUG00000022617	chd1l	84	60.046	ENSNLEG00000000179	CHD1L	97	59.179	Nomascus_leucogenys
ENSIPUG00000022617	chd1l	82	51.777	ENSOPRG00000006973	CHD1L	85	58.627	Ochotona_princeps
ENSIPUG00000022617	chd1l	85	56.711	ENSODEG00000002494	CHD1L	99	56.585	Octodon_degus
ENSIPUG00000022617	chd1l	100	64.802	ENSONIG00000003183	chd1l	100	64.734	Oreochromis_niloticus
ENSIPUG00000022617	chd1l	75	59.484	ENSOANG00000003068	CHD1L	93	59.484	Ornithorhynchus_anatinus
ENSIPUG00000022617	chd1l	85	57.966	ENSOCUG00000009336	CHD1L	97	56.823	Oryctolagus_cuniculus
ENSIPUG00000022617	chd1l	88	62.775	ENSORLG00000003673	chd1l	95	65.438	Oryzias_latipes
ENSIPUG00000022617	chd1l	94	63.261	ENSORLG00020005123	chd1l	99	63.240	Oryzias_latipes_hni
ENSIPUG00000022617	chd1l	94	63.448	ENSORLG00015001680	chd1l	98	65.668	Oryzias_latipes_hsok
ENSIPUG00000022617	chd1l	81	61.393	ENSOMEG00000006109	chd1l	96	60.610	Oryzias_melastigma
ENSIPUG00000022617	chd1l	86	59.863	ENSOGAG00000008775	CHD1L	97	60.641	Otolemur_garnettii
ENSIPUG00000022617	chd1l	86	60.274	ENSOARG00000020547	CHD1L	98	61.831	Ovis_aries
ENSIPUG00000022617	chd1l	86	59.432	ENSPPAG00000039193	CHD1L	98	61.406	Pan_paniscus
ENSIPUG00000022617	chd1l	85	61.079	ENSPPRG00000010258	CHD1L	98	59.798	Panthera_pardus
ENSIPUG00000022617	chd1l	86	59.205	ENSPTRG00000001220	CHD1L	95	60.560	Pan_troglodytes
ENSIPUG00000022617	chd1l	83	61.511	ENSPANG00000009170	CHD1L	98	59.639	Papio_anubis
ENSIPUG00000022617	chd1l	99	62.891	ENSPKIG00000022166	chd1l	97	65.102	Paramormyrops_kingsleyae
ENSIPUG00000022617	chd1l	86	60.775	ENSPSIG00000012595	CHD1L	99	60.806	Pelodiscus_sinensis
ENSIPUG00000022617	chd1l	85	58.864	ENSPEMG00000013528	Chd1l	99	58.398	Peromyscus_maniculatus_bairdii
ENSIPUG00000022617	chd1l	81	60.990	ENSPCIG00000030409	CHD1L	99	60.822	Phascolarctos_cinereus
ENSIPUG00000022617	chd1l	99	64.466	ENSPFOG00000015948	chd1l	100	63.733	Poecilia_formosa
ENSIPUG00000022617	chd1l	99	64.376	ENSPLAG00000015145	chd1l	97	67.394	Poecilia_latipinna
ENSIPUG00000022617	chd1l	94	64.870	ENSPMEG00000008720	chd1l	99	64.293	Poecilia_mexicana
ENSIPUG00000022617	chd1l	85	67.583	ENSPREG00000017885	chd1l	98	67.471	Poecilia_reticulata
ENSIPUG00000022617	chd1l	84	60.698	ENSPPYG00000000946	CHD1L	95	60.698	Pongo_abelii
ENSIPUG00000022617	chd1l	80	54.859	ENSPCAG00000005959	CHD1L	91	55.160	Procavia_capensis
ENSIPUG00000022617	chd1l	83	56.588	ENSPVAG00000006084	CHD1L	99	57.379	Pteropus_vampyrus
ENSIPUG00000022617	chd1l	85	67.995	ENSPNYG00000013001	chd1l	97	68.571	Pundamilia_nyererei
ENSIPUG00000022617	chd1l	100	73.541	ENSPNAG00000011881	chd1l	100	73.833	Pygocentrus_nattereri
ENSIPUG00000022617	chd1l	87	60.089	ENSRNOG00000017669	Chd1l	99	60.582	Rattus_norvegicus
ENSIPUG00000022617	chd1l	84	59.884	ENSRBIG00000041272	CHD1L	97	59.065	Rhinopithecus_bieti
ENSIPUG00000022617	chd1l	84	59.813	ENSRROG00000041354	CHD1L	96	59.766	Rhinopithecus_roxellana
ENSIPUG00000022617	chd1l	86	59.521	ENSSHAG00000017395	CHD1L	99	59.502	Sarcophilus_harrisii
ENSIPUG00000022617	chd1l	95	63.440	ENSSFOG00015003649	chd1l	98	65.780	Scleropages_formosus
ENSIPUG00000022617	chd1l	100	62.500	ENSSMAG00000019377	chd1l	97	65.564	Scophthalmus_maximus
ENSIPUG00000022617	chd1l	86	66.855	ENSSDUG00000019831	chd1l	98	67.314	Seriola_dumerili
ENSIPUG00000022617	chd1l	83	68.933	ENSSLDG00000012714	chd1l	95	68.581	Seriola_lalandi_dorsalis
ENSIPUG00000022617	chd1l	87	59.933	ENSSPUG00000016865	CHD1L	99	61.036	Sphenodon_punctatus
ENSIPUG00000022617	chd1l	94	65.177	ENSSPAG00000017653	chd1l	99	65.281	Stegastes_partitus
ENSIPUG00000022617	chd1l	86	59.132	ENSSSCG00000006701	CHD1L	99	59.322	Sus_scrofa
ENSIPUG00000022617	chd1l	83	62.118	ENSTGUG00000013392	-	99	61.015	Taeniopygia_guttata
ENSIPUG00000022617	chd1l	83	60.517	ENSTNIG00000004902	chd1l	99	60.397	Tetraodon_nigroviridis
ENSIPUG00000022617	chd1l	85	57.520	ENSTTRG00000011711	CHD1L	100	58.121	Tursiops_truncatus
ENSIPUG00000022617	chd1l	87	59.572	ENSUAMG00000021991	CHD1L	98	60.565	Ursus_americanus
ENSIPUG00000022617	chd1l	87	59.347	ENSUMAG00000009733	CHD1L	98	60.113	Ursus_maritimus
ENSIPUG00000022617	chd1l	87	59.641	ENSVVUG00000007316	CHD1L	94	60.405	Vulpes_vulpes
ENSIPUG00000022617	chd1l	96	62.892	ENSXCOG00000008336	chd1l	96	62.173	Xiphophorus_couchianus
ENSIPUG00000022617	chd1l	99	64.494	ENSXMAG00000015898	chd1l	100	63.698	Xiphophorus_maculatus