EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000022659 (Gene tree)
Gene ID: 108272976
Gene Symbol: si:ch211-256m1.8
Alias: -
Full Name: uncharacterized LOC108272976
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 8627 bases
Position: chr12:26707509-26716135
Accession: 108272976
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000033698	tRNA-synt_2	PF00152.20	4.9e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000035023	-	5295	XM_017481883	ENSIPUP00000033698	1569 (aa)	XP_017337372	A0A2D0S3P3

Gene Model

Click here to download ENSIPUG00000022659's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu00250	Alanine, aspartate and glutamate metabolism	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000022659's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000022659	si:ch211-256m1.8	100	64.470	ENSAPOG00000007012	si:ch211-256m1.8	100	64.470	Acanthochromis_polyacanthus
ENSIPUG00000022659	si:ch211-256m1.8	100	64.806	ENSAOCG00000012258	si:ch211-256m1.8	100	64.806	Amphiprion_ocellaris
ENSIPUG00000022659	si:ch211-256m1.8	100	64.806	ENSAPEG00000002724	si:ch211-256m1.8	100	64.806	Amphiprion_percula
ENSIPUG00000022659	si:ch211-256m1.8	100	67.023	ENSATEG00000006278	si:ch211-256m1.8	100	67.023	Anabas_testudineus
ENSIPUG00000022659	si:ch211-256m1.8	100	65.788	ENSACLG00000011503	si:ch211-256m1.8	100	65.788	Astatotilapia_calliptera
ENSIPUG00000022659	si:ch211-256m1.8	100	80.468	ENSAMXG00000038245	si:ch211-256m1.8	100	80.468	Astyanax_mexicanus
ENSIPUG00000022659	si:ch211-256m1.8	100	66.079	ENSCSEG00000006255	si:ch211-256m1.8	100	66.079	Cynoglossus_semilaevis
ENSIPUG00000022659	si:ch211-256m1.8	100	65.469	ENSCVAG00000003376	si:ch211-256m1.8	100	65.469	Cyprinodon_variegatus
ENSIPUG00000022659	si:ch211-256m1.8	100	73.067	ENSDARG00000055172	si:ch211-256m1.8	100	73.067	Danio_rerio
ENSIPUG00000022659	si:ch211-256m1.8	100	69.125	ENSELUG00000010546	si:ch211-256m1.8	100	69.125	Esox_lucius
ENSIPUG00000022659	si:ch211-256m1.8	100	64.691	ENSFHEG00000005847	si:ch211-256m1.8	100	65.277	Fundulus_heteroclitus
ENSIPUG00000022659	si:ch211-256m1.8	100	65.176	ENSGAFG00000010269	si:ch211-256m1.8	100	65.176	Gambusia_affinis
ENSIPUG00000022659	si:ch211-256m1.8	100	65.976	ENSHBUG00000014407	si:ch211-256m1.8	100	65.976	Haplochromis_burtoni
ENSIPUG00000022659	si:ch211-256m1.8	100	64.083	ENSHCOG00000006884	si:ch211-256m1.8	100	65.710	Hippocampus_comes
ENSIPUG00000022659	si:ch211-256m1.8	100	65.890	ENSKMAG00000016377	si:ch211-256m1.8	100	65.890	Kryptolebias_marmoratus
ENSIPUG00000022659	si:ch211-256m1.8	100	65.765	ENSLBEG00000010639	si:ch211-256m1.8	100	65.765	Labrus_bergylta
ENSIPUG00000022659	si:ch211-256m1.8	100	62.382	ENSLOCG00000011127	si:ch211-256m1.8	100	62.382	Lepisosteus_oculatus
ENSIPUG00000022659	si:ch211-256m1.8	99	65.595	ENSMAMG00000005651	si:ch211-256m1.8	99	65.595	Mastacembelus_armatus
ENSIPUG00000022659	si:ch211-256m1.8	100	65.851	ENSMZEG00005006924	si:ch211-256m1.8	100	65.851	Maylandia_zebra
ENSIPUG00000022659	si:ch211-256m1.8	100	62.484	ENSMMOG00000001736	si:ch211-256m1.8	100	62.484	Mola_mola
ENSIPUG00000022659	si:ch211-256m1.8	100	65.851	ENSNBRG00000005143	si:ch211-256m1.8	100	65.851	Neolamprologus_brichardi
ENSIPUG00000022659	si:ch211-256m1.8	100	64.119	ENSORLG00000022248	si:ch211-256m1.8	100	64.119	Oryzias_latipes
ENSIPUG00000022659	si:ch211-256m1.8	100	63.613	ENSORLG00020000214	si:ch211-256m1.8	100	63.613	Oryzias_latipes_hni
ENSIPUG00000022659	si:ch211-256m1.8	100	63.906	ENSORLG00015020297	si:ch211-256m1.8	100	64.744	Oryzias_latipes_hsok
ENSIPUG00000022659	si:ch211-256m1.8	100	63.648	ENSOMEG00000004519	si:ch211-256m1.8	100	64.373	Oryzias_melastigma
ENSIPUG00000022659	si:ch211-256m1.8	100	61.811	ENSPKIG00000007399	si:ch211-256m1.8	100	61.811	Paramormyrops_kingsleyae
ENSIPUG00000022659	si:ch211-256m1.8	98	63.081	ENSPMGG00000007698	si:ch211-256m1.8	100	63.081	Periophthalmus_magnuspinnatus
ENSIPUG00000022659	si:ch211-256m1.8	100	65.511	ENSPFOG00000005178	si:ch211-256m1.8	100	65.511	Poecilia_formosa
ENSIPUG00000022659	si:ch211-256m1.8	100	65.428	ENSPLAG00000006872	si:ch211-256m1.8	100	65.428	Poecilia_latipinna
ENSIPUG00000022659	si:ch211-256m1.8	100	65.154	ENSPMEG00000021815	si:ch211-256m1.8	100	65.154	Poecilia_mexicana
ENSIPUG00000022659	si:ch211-256m1.8	100	65.639	ENSPREG00000018669	si:ch211-256m1.8	100	65.639	Poecilia_reticulata
ENSIPUG00000022659	si:ch211-256m1.8	100	65.851	ENSPNYG00000018038	si:ch211-256m1.8	100	65.851	Pundamilia_nyererei
ENSIPUG00000022659	si:ch211-256m1.8	99	77.869	ENSPNAG00000018965	-	99	77.869	Pygocentrus_nattereri
ENSIPUG00000022659	si:ch211-256m1.8	99	78.748	ENSPNAG00000003552	si:ch211-256m1.8	99	78.947	Pygocentrus_nattereri
ENSIPUG00000022659	si:ch211-256m1.8	100	66.960	ENSSFOG00015008344	si:ch211-256m1.8	100	66.792	Scleropages_formosus
ENSIPUG00000022659	si:ch211-256m1.8	100	66.352	ENSSMAG00000007562	si:ch211-256m1.8	100	66.352	Scophthalmus_maximus
ENSIPUG00000022659	si:ch211-256m1.8	100	68.179	ENSSDUG00000018180	si:ch211-256m1.8	100	68.179	Seriola_dumerili
ENSIPUG00000022659	si:ch211-256m1.8	100	68.053	ENSSLDG00000020310	si:ch211-256m1.8	100	68.053	Seriola_lalandi_dorsalis
ENSIPUG00000022659	si:ch211-256m1.8	100	65.452	ENSSPAG00000013419	si:ch211-256m1.8	100	65.452	Stegastes_partitus
ENSIPUG00000022659	si:ch211-256m1.8	100	59.975	ENSTRUG00000023803	si:ch211-256m1.8	100	59.975	Takifugu_rubripes
ENSIPUG00000022659	si:ch211-256m1.8	100	65.365	ENSXCOG00000017726	si:ch211-256m1.8	100	65.365	Xiphophorus_couchianus
ENSIPUG00000022659	si:ch211-256m1.8	100	65.239	ENSXMAG00000026576	si:ch211-256m1.8	100	65.239	Xiphophorus_maculatus