EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000022817 (Gene tree)
Gene ID: 108277297
Gene Symbol: smarcad1b
Alias: si:dkey-76p7.6
Full Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1B-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 20105 bases
Position: chr16:3366964-3387068
Accession: 108277297
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000033975	ResIII	PF04851.15	7.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000035309	-	3280	XM_017489896	ENSIPUP00000033975	922 (aa)	XP_017345385	A0A2D0SSB0

Gene Model

Click here to download ENSIPUG00000022817's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000022817's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000022817	smarcad1b	56	30.127	ENSIPUG00000018531	rad54b	53	30.127
ENSIPUG00000022817	smarcad1b	55	35.478	ENSIPUG00000002634	HELLS	63	35.478
ENSIPUG00000022817	smarcad1b	77	70.736	ENSIPUG00000000242	smarcad1a	78	70.245

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000022817	smarcad1b	89	57.279	ENSG00000163104	SMARCAD1	100	67.114	Homo_sapiens
ENSIPUG00000022817	smarcad1b	86	72.134	ENSAPOG00000011446	smarcad1a	71	74.277	Acanthochromis_polyacanthus
ENSIPUG00000022817	smarcad1b	84	59.745	ENSAMEG00000005844	SMARCAD1	81	56.821	Ailuropoda_melanoleuca
ENSIPUG00000022817	smarcad1b	72	70.465	ENSACIG00000018326	smarcad1a	89	73.386	Amphilophus_citrinellus
ENSIPUG00000022817	smarcad1b	86	72.368	ENSAOCG00000019762	smarcad1a	78	68.716	Amphiprion_ocellaris
ENSIPUG00000022817	smarcad1b	88	72.222	ENSAPEG00000003889	smarcad1a	78	68.673	Amphiprion_percula
ENSIPUG00000022817	smarcad1b	77	73.966	ENSATEG00000015608	smarcad1a	85	67.073	Anabas_testudineus
ENSIPUG00000022817	smarcad1b	98	53.579	ENSAPLG00000004630	SMARCAD1	100	53.579	Anas_platyrhynchos
ENSIPUG00000022817	smarcad1b	99	51.590	ENSACAG00000013554	SMARCAD1	94	51.639	Anolis_carolinensis
ENSIPUG00000022817	smarcad1b	89	57.295	ENSANAG00000020488	SMARCAD1	91	56.802	Aotus_nancymaae
ENSIPUG00000022817	smarcad1b	83	71.199	ENSACLG00000017063	smarcad1a	71	74.080	Astatotilapia_calliptera
ENSIPUG00000022817	smarcad1b	70	69.419	ENSAMXG00000015470	smarcad1a	92	69.419	Astyanax_mexicanus
ENSIPUG00000022817	smarcad1b	100	75.932	ENSAMXG00000019130	smarcad1b	100	76.907	Astyanax_mexicanus
ENSIPUG00000022817	smarcad1b	89	57.007	ENSBTAG00000017061	SMARCAD1	81	56.940	Bos_taurus
ENSIPUG00000022817	smarcad1b	69	40.839	WBGene00010845	M03C11.8	66	40.244	Caenorhabditis_elegans
ENSIPUG00000022817	smarcad1b	89	57.432	ENSCJAG00000006778	SMARCAD1	81	56.921	Callithrix_jacchus
ENSIPUG00000022817	smarcad1b	84	59.873	ENSCAFG00000010026	SMARCAD1	81	56.940	Canis_familiaris
ENSIPUG00000022817	smarcad1b	89	57.365	ENSCAFG00020003994	SMARCAD1	93	57.297	Canis_lupus_dingo
ENSIPUG00000022817	smarcad1b	84	59.545	ENSCHIG00000012905	SMARCAD1	81	56.722	Capra_hircus
ENSIPUG00000022817	smarcad1b	84	59.745	ENSTSYG00000002706	SMARCAD1	81	57.006	Carlito_syrichta
ENSIPUG00000022817	smarcad1b	86	50.552	ENSCAPG00000016744	SMARCAD1	88	50.798	Cavia_aperea
ENSIPUG00000022817	smarcad1b	84	59.898	ENSCPOG00000011398	SMARCAD1	80	57.160	Cavia_porcellus
ENSIPUG00000022817	smarcad1b	84	59.924	ENSCCAG00000022264	SMARCAD1	100	67.282	Cebus_capucinus
ENSIPUG00000022817	smarcad1b	99	51.890	ENSCATG00000035663	SMARCAD1	93	56.802	Cercocebus_atys
ENSIPUG00000022817	smarcad1b	89	57.279	ENSCSAG00000004186	SMARCAD1	99	56.802	Chlorocebus_sabaeus
ENSIPUG00000022817	smarcad1b	99	52.415	ENSCPBG00000013203	SMARCAD1	93	52.263	Chrysemys_picta_bellii
ENSIPUG00000022817	smarcad1b	70	50.683	ENSCING00000001688	-	99	50.683	Ciona_intestinalis
ENSIPUG00000022817	smarcad1b	99	52.094	ENSCANG00000003556	SMARCAD1	100	67.114	Colobus_angolensis_palliatus
ENSIPUG00000022817	smarcad1b	84	59.848	ENSCGRG00001015056	Smarcad1	81	57.177	Cricetulus_griseus_chok1gshd
ENSIPUG00000022817	smarcad1b	84	59.848	ENSCGRG00000014087	Smarcad1	81	57.177	Cricetulus_griseus_crigri
ENSIPUG00000022817	smarcad1b	84	68.529	ENSCSEG00000017903	smarcad1a	72	70.687	Cynoglossus_semilaevis
ENSIPUG00000022817	smarcad1b	81	68.328	ENSCSEG00000014419	-	77	70.353	Cynoglossus_semilaevis
ENSIPUG00000022817	smarcad1b	97	55.626	ENSDARG00000014041	smarcad1a	95	56.748	Danio_rerio
ENSIPUG00000022817	smarcad1b	99	68.158	ENSDARG00000073721	smarcad1b	98	68.980	Danio_rerio
ENSIPUG00000022817	smarcad1b	89	57.126	ENSDNOG00000000806	-	81	56.886	Dasypus_novemcinctus
ENSIPUG00000022817	smarcad1b	89	57.467	ENSDORG00000012331	Smarcad1	81	57.348	Dipodomys_ordii
ENSIPUG00000022817	smarcad1b	70	43.884	FBgn0032157	Etl1	75	44.618	Drosophila_melanogaster
ENSIPUG00000022817	smarcad1b	68	46.573	ENSEBUG00000003969	smarcad1a	93	47.833	Eptatretus_burgeri
ENSIPUG00000022817	smarcad1b	84	60.025	ENSEASG00005012382	SMARCAD1	81	56.923	Equus_asinus_asinus
ENSIPUG00000022817	smarcad1b	84	60.025	ENSECAG00000011562	SMARCAD1	81	56.923	Equus_caballus
ENSIPUG00000022817	smarcad1b	97	64.624	ENSELUG00000019154	smarcad1b	93	64.194	Esox_lucius
ENSIPUG00000022817	smarcad1b	89	64.253	ENSELUG00000018535	smarcad1a	85	64.138	Esox_lucius
ENSIPUG00000022817	smarcad1b	89	57.126	ENSFCAG00000003958	SMARCAD1	100	66.779	Felis_catus
ENSIPUG00000022817	smarcad1b	98	54.227	ENSFALG00000006089	SMARCAD1	93	53.586	Ficedula_albicollis
ENSIPUG00000022817	smarcad1b	84	60.025	ENSFDAG00000017027	SMARCAD1	81	57.399	Fukomys_damarensis
ENSIPUG00000022817	smarcad1b	84	70.659	ENSFHEG00000012778	smarcad1a	71	71.736	Fundulus_heteroclitus
ENSIPUG00000022817	smarcad1b	85	65.530	ENSGMOG00000018995	smarcad1a	90	65.102	Gadus_morhua
ENSIPUG00000022817	smarcad1b	84	58.186	ENSGALG00000037339	SMARCAD1	94	58.048	Gallus_gallus
ENSIPUG00000022817	smarcad1b	87	72.134	ENSGAFG00000013498	smarcad1a	69	72.134	Gambusia_affinis
ENSIPUG00000022817	smarcad1b	88	63.946	ENSGACG00000007327	smarcad1a	92	63.703	Gasterosteus_aculeatus
ENSIPUG00000022817	smarcad1b	99	51.992	ENSGAGG00000008582	SMARCAD1	93	51.799	Gopherus_agassizii
ENSIPUG00000022817	smarcad1b	89	57.279	ENSGGOG00000023001	SMARCAD1	81	56.802	Gorilla_gorilla
ENSIPUG00000022817	smarcad1b	83	71.053	ENSHBUG00000011042	smarcad1a	71	73.926	Haplochromis_burtoni
ENSIPUG00000022817	smarcad1b	84	60.152	ENSHGLG00000005070	SMARCAD1	80	57.518	Heterocephalus_glaber_female
ENSIPUG00000022817	smarcad1b	84	60.152	ENSHGLG00100006812	SMARCAD1	80	57.518	Heterocephalus_glaber_male
ENSIPUG00000022817	smarcad1b	86	70.330	ENSHCOG00000007848	smarcad1a	75	69.325	Hippocampus_comes
ENSIPUG00000022817	smarcad1b	89	57.449	ENSSTOG00000001227	SMARCAD1	81	56.973	Ictidomys_tridecemlineatus
ENSIPUG00000022817	smarcad1b	89	57.656	ENSJJAG00000022342	Smarcad1	81	57.279	Jaculus_jaculus
ENSIPUG00000022817	smarcad1b	78	71.212	ENSKMAG00000021351	smarcad1a	71	72.154	Kryptolebias_marmoratus
ENSIPUG00000022817	smarcad1b	83	72.945	ENSLBEG00000008088	smarcad1a	72	74.194	Labrus_bergylta
ENSIPUG00000022817	smarcad1b	98	57.427	ENSLOCG00000012909	smarcad1a	96	57.956	Lepisosteus_oculatus
ENSIPUG00000022817	smarcad1b	89	56.683	ENSLAFG00000000040	SMARCAD1	81	56.615	Loxodonta_africana
ENSIPUG00000022817	smarcad1b	99	51.685	ENSMFAG00000042606	SMARCAD1	93	56.683	Macaca_fascicularis
ENSIPUG00000022817	smarcad1b	89	57.160	ENSMMUG00000022242	SMARCAD1	93	56.683	Macaca_mulatta
ENSIPUG00000022817	smarcad1b	99	51.685	ENSMNEG00000038117	SMARCAD1	100	67.114	Macaca_nemestrina
ENSIPUG00000022817	smarcad1b	99	51.890	ENSMLEG00000038333	SMARCAD1	100	67.114	Mandrillus_leucophaeus
ENSIPUG00000022817	smarcad1b	99	56.733	ENSMAMG00000000933	smarcad1a	72	73.579	Mastacembelus_armatus
ENSIPUG00000022817	smarcad1b	74	71.199	ENSMZEG00005005203	smarcad1a	64	74.080	Maylandia_zebra
ENSIPUG00000022817	smarcad1b	98	49.541	ENSMGAG00000005577	SMARCAD1	100	49.393	Meleagris_gallopavo
ENSIPUG00000022817	smarcad1b	89	57.126	ENSMAUG00000008417	Smarcad1	81	57.006	Mesocricetus_auratus
ENSIPUG00000022817	smarcad1b	89	57.738	ENSMICG00000009746	SMARCAD1	81	57.262	Microcebus_murinus
ENSIPUG00000022817	smarcad1b	84	59.796	ENSMOCG00000017142	Smarcad1	81	56.938	Microtus_ochrogaster
ENSIPUG00000022817	smarcad1b	85	65.239	ENSMMOG00000000275	smarcad1a	91	73.620	Mola_mola
ENSIPUG00000022817	smarcad1b	99	52.469	ENSMODG00000019268	SMARCAD1	94	52.317	Monodelphis_domestica
ENSIPUG00000022817	smarcad1b	89	57.605	MGP_CAROLIEiJ_G0028458	-	66	57.126	Mus_caroli
ENSIPUG00000022817	smarcad1b	89	57.074	ENSMUSG00000029920	Smarcad1	81	56.595	Mus_musculus
ENSIPUG00000022817	smarcad1b	89	57.554	MGP_PahariEiJ_G0022198	Smarcad1	81	57.074	Mus_pahari
ENSIPUG00000022817	smarcad1b	89	57.485	MGP_SPRETEiJ_G0029462	Smarcad1	81	57.006	Mus_spretus
ENSIPUG00000022817	smarcad1b	84	59.490	ENSMPUG00000002111	SMARCAD1	81	56.584	Mustela_putorius_furo
ENSIPUG00000022817	smarcad1b	84	60.277	ENSMLUG00000000425	SMARCAD1	81	57.788	Myotis_lucifugus
ENSIPUG00000022817	smarcad1b	84	59.898	ENSNGAG00000000810	Smarcad1	82	57.041	Nannospalax_galili
ENSIPUG00000022817	smarcad1b	73	70.354	ENSNBRG00000012749	smarcad1a	77	73.053	Neolamprologus_brichardi
ENSIPUG00000022817	smarcad1b	89	57.279	ENSNLEG00000014225	SMARCAD1	100	67.114	Nomascus_leucogenys
ENSIPUG00000022817	smarcad1b	84	60.203	ENSODEG00000004334	SMARCAD1	81	57.518	Octodon_degus
ENSIPUG00000022817	smarcad1b	69	73.167	ENSONIG00000015059	smarcad1a	83	63.951	Oreochromis_niloticus
ENSIPUG00000022817	smarcad1b	86	58.902	ENSOANG00000013764	SMARCAD1	98	59.830	Ornithorhynchus_anatinus
ENSIPUG00000022817	smarcad1b	89	56.766	ENSOCUG00000017283	SMARCAD1	81	56.287	Oryctolagus_cuniculus
ENSIPUG00000022817	smarcad1b	70	72.239	ENSORLG00000004869	smarcad1a	64	70.222	Oryzias_latipes
ENSIPUG00000022817	smarcad1b	70	72.393	ENSORLG00020020569	smarcad1a	64	70.370	Oryzias_latipes_hni
ENSIPUG00000022817	smarcad1b	70	72.393	ENSORLG00015009045	smarcad1a	62	72.393	Oryzias_latipes_hsok
ENSIPUG00000022817	smarcad1b	84	71.889	ENSOMEG00000023032	smarcad1a	73	71.889	Oryzias_melastigma
ENSIPUG00000022817	smarcad1b	84	59.212	ENSOGAG00000011444	SMARCAD1	81	56.579	Otolemur_garnettii
ENSIPUG00000022817	smarcad1b	84	59.545	ENSOARG00000017851	SMARCAD1	81	56.722	Ovis_aries
ENSIPUG00000022817	smarcad1b	89	57.279	ENSPPAG00000035715	SMARCAD1	81	56.802	Pan_paniscus
ENSIPUG00000022817	smarcad1b	89	57.126	ENSPPRG00000024756	SMARCAD1	100	66.779	Panthera_pardus
ENSIPUG00000022817	smarcad1b	89	57.109	ENSPTIG00000017868	SMARCAD1	81	56.870	Panthera_tigris_altaica
ENSIPUG00000022817	smarcad1b	89	57.279	ENSPTRG00000023126	SMARCAD1	100	67.114	Pan_troglodytes
ENSIPUG00000022817	smarcad1b	99	50.916	ENSPANG00000019757	SMARCAD1	95	50.711	Papio_anubis
ENSIPUG00000022817	smarcad1b	99	52.941	ENSPSIG00000010255	SMARCAD1	92	52.680	Pelodiscus_sinensis
ENSIPUG00000022817	smarcad1b	69	68.075	ENSPMGG00000010735	smarcad1a	94	66.818	Periophthalmus_magnuspinnatus
ENSIPUG00000022817	smarcad1b	82	53.553	ENSPEMG00000001854	Smarcad1	82	50.362	Peromyscus_maniculatus_bairdii
ENSIPUG00000022817	smarcad1b	87	52.121	ENSPMAG00000003516	smarcad1a	80	52.063	Petromyzon_marinus
ENSIPUG00000022817	smarcad1b	84	60.100	ENSPCIG00000008137	SMARCAD1	98	59.730	Phascolarctos_cinereus
ENSIPUG00000022817	smarcad1b	78	72.841	ENSPFOG00000019116	smarcad1a	66	72.841	Poecilia_formosa
ENSIPUG00000022817	smarcad1b	78	72.684	ENSPLAG00000000108	smarcad1a	66	72.684	Poecilia_latipinna
ENSIPUG00000022817	smarcad1b	78	72.841	ENSPMEG00000009155	smarcad1a	66	72.841	Poecilia_mexicana
ENSIPUG00000022817	smarcad1b	88	71.088	ENSPREG00000018185	smarcad1a	74	73.312	Poecilia_reticulata
ENSIPUG00000022817	smarcad1b	89	57.024	ENSPPYG00000014935	SMARCAD1	81	56.548	Pongo_abelii
ENSIPUG00000022817	smarcad1b	78	52.322	ENSPCOG00000020478	SMARCAD1	73	55.556	Propithecus_coquereli
ENSIPUG00000022817	smarcad1b	89	57.177	ENSPVAG00000001760	SMARCAD1	81	57.109	Pteropus_vampyrus
ENSIPUG00000022817	smarcad1b	73	69.630	ENSPNYG00000010087	smarcad1a	77	72.473	Pundamilia_nyererei
ENSIPUG00000022817	smarcad1b	100	77.966	ENSPNAG00000010099	smarcad1b	100	78.118	Pygocentrus_nattereri
ENSIPUG00000022817	smarcad1b	87	62.425	ENSPNAG00000001663	smarcad1a	85	62.425	Pygocentrus_nattereri
ENSIPUG00000022817	smarcad1b	88	57.998	ENSRNOG00000006391	Smarcad1	79	57.509	Rattus_norvegicus
ENSIPUG00000022817	smarcad1b	99	51.992	ENSRBIG00000041989	SMARCAD1	95	51.478	Rhinopithecus_bieti
ENSIPUG00000022817	smarcad1b	99	51.992	ENSRROG00000035309	SMARCAD1	95	51.478	Rhinopithecus_roxellana
ENSIPUG00000022817	smarcad1b	99	52.085	ENSSBOG00000032114	SMARCAD1	100	67.282	Saimiri_boliviensis_boliviensis
ENSIPUG00000022817	smarcad1b	99	52.454	ENSSHAG00000001279	SMARCAD1	94	52.254	Sarcophilus_harrisii
ENSIPUG00000022817	smarcad1b	99	61.765	ENSSFOG00015016814	smarcad1b	96	61.963	Scleropages_formosus
ENSIPUG00000022817	smarcad1b	82	63.543	ENSSFOG00015020909	smarcad1a	100	63.355	Scleropages_formosus
ENSIPUG00000022817	smarcad1b	84	69.899	ENSSMAG00000001326	smarcad1a	70	72.603	Scophthalmus_maximus
ENSIPUG00000022817	smarcad1b	74	71.802	ENSSDUG00000022338	smarcad1a	78	73.788	Seriola_dumerili
ENSIPUG00000022817	smarcad1b	81	70.930	ENSSLDG00000024986	smarcad1a	71	72.879	Seriola_lalandi_dorsalis
ENSIPUG00000022817	smarcad1b	63	66.218	ENSSPUG00000004633	SMARCAD1	99	66.218	Sphenodon_punctatus
ENSIPUG00000022817	smarcad1b	82	72.424	ENSSPAG00000001970	smarcad1a	70	74.847	Stegastes_partitus
ENSIPUG00000022817	smarcad1b	84	59.873	ENSSSCG00000009193	SMARCAD1	99	56.789	Sus_scrofa
ENSIPUG00000022817	smarcad1b	84	59.748	ENSTGUG00000003127	SMARCAD1	100	60.500	Taeniopygia_guttata
ENSIPUG00000022817	smarcad1b	86	66.419	ENSTNIG00000017585	smarcad1a	94	64.904	Tetraodon_nigroviridis
ENSIPUG00000022817	smarcad1b	74	70.437	ENSTBEG00000002789	SMARCAD1	69	70.437	Tupaia_belangeri
ENSIPUG00000022817	smarcad1b	89	57.075	ENSTTRG00000000226	SMARCAD1	83	56.837	Tursiops_truncatus
ENSIPUG00000022817	smarcad1b	84	59.618	ENSUAMG00000022262	SMARCAD1	79	59.140	Ursus_americanus
ENSIPUG00000022817	smarcad1b	89	57.126	ENSUMAG00000004549	SMARCAD1	81	57.057	Ursus_maritimus
ENSIPUG00000022817	smarcad1b	84	59.645	ENSVVUG00000007271	SMARCAD1	99	56.738	Vulpes_vulpes
ENSIPUG00000022817	smarcad1b	83	55.013	ENSXETG00000019214	smarcad1	89	55.371	Xenopus_tropicalis
ENSIPUG00000022817	smarcad1b	83	65.274	ENSXCOG00000005232	smarcad1a	79	71.429	Xiphophorus_couchianus
ENSIPUG00000022817	smarcad1b	83	69.041	ENSXMAG00000015350	smarcad1a	66	72.841	Xiphophorus_maculatus