EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000022928 (Gene tree)
Gene ID: 108274520
Gene Symbol: sall1b
Alias: -
Full Name: sal-like protein 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 7075 bases
Position: chr14:13538796-13545870
Accession: 108274520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000034120	zf-C2H2	PF00096.26	8.7e-33	1	5
ENSIPUP00000034120	zf-C2H2	PF00096.26	8.7e-33	2	5
ENSIPUP00000034120	zf-C2H2	PF00096.26	8.7e-33	3	5
ENSIPUP00000034120	zf-C2H2	PF00096.26	8.7e-33	4	5
ENSIPUP00000034120	zf-C2H2	PF00096.26	8.7e-33	5	5
ENSIPUP00000034120	zf-met	PF12874.7	1.5e-23	1	3
ENSIPUP00000034120	zf-met	PF12874.7	1.5e-23	2	3
ENSIPUP00000034120	zf-met	PF12874.7	1.5e-23	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000035459	-	5038	XM_017484727	ENSIPUP00000034120	1262 (aa)	XP_017340216	A0A2D0SCM4

Gene Model

Click here to download ENSIPUG00000022928's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000022928's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000022928	sall1b	56	46.429	ENSIPUG00000007076	-	91	52.830
ENSIPUG00000022928	sall1b	65	48.000	ENSIPUG00000004905	znf236	77	49.020
ENSIPUG00000022928	sall1b	55	48.936	ENSIPUG00000006916	-	84	48.936
ENSIPUG00000022928	sall1b	99	50.302	ENSIPUG00000016265	SALL1	99	50.302
ENSIPUG00000022928	sall1b	56	50.943	ENSIPUG00000023688	-	96	46.154
ENSIPUG00000022928	sall1b	56	53.659	ENSIPUG00000022751	-	93	53.659
ENSIPUG00000022928	sall1b	74	60.345	ENSIPUG00000003006	sall3b	86	60.345
ENSIPUG00000022928	sall1b	62	47.170	ENSIPUG00000016075	-	90	51.111
ENSIPUG00000022928	sall1b	75	63.462	ENSIPUG00000019170	sall4	77	63.462
ENSIPUG00000022928	sall1b	60	39.130	ENSIPUG00000021441	-	91	48.936

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000022928	sall1b	99	48.663	ENSG00000103449	SALL1	99	48.964	Homo_sapiens
ENSIPUG00000022928	sall1b	99	50.491	ENSAPOG00000022764	sall1a	99	50.717	Acanthochromis_polyacanthus
ENSIPUG00000022928	sall1b	99	48.387	ENSAMEG00000006817	SALL1	99	49.365	Ailuropoda_melanoleuca
ENSIPUG00000022928	sall1b	99	50.000	ENSACIG00000004231	sall1a	99	50.493	Amphilophus_citrinellus
ENSIPUG00000022928	sall1b	99	50.340	ENSAOCG00000002800	sall1a	99	50.566	Amphiprion_ocellaris
ENSIPUG00000022928	sall1b	99	50.264	ENSAPEG00000010179	sall1a	99	50.491	Amphiprion_percula
ENSIPUG00000022928	sall1b	99	50.113	ENSATEG00000003006	sall1a	99	50.340	Anabas_testudineus
ENSIPUG00000022928	sall1b	99	49.776	ENSAPLG00000003356	SALL1	99	49.963	Anas_platyrhynchos
ENSIPUG00000022928	sall1b	97	48.825	ENSACAG00000014399	SALL1	94	49.042	Anolis_carolinensis
ENSIPUG00000022928	sall1b	99	48.097	ENSANAG00000027238	SALL1	99	48.968	Aotus_nancymaae
ENSIPUG00000022928	sall1b	99	49.735	ENSACLG00000017148	sall1a	99	50.410	Astatotilapia_calliptera
ENSIPUG00000022928	sall1b	99	62.280	ENSAMXG00000017702	sall1b	100	62.357	Astyanax_mexicanus
ENSIPUG00000022928	sall1b	99	50.795	ENSAMXG00000018599	sall1a	99	50.871	Astyanax_mexicanus
ENSIPUG00000022928	sall1b	99	48.399	ENSBTAG00000008544	SALL1	99	48.920	Bos_taurus
ENSIPUG00000022928	sall1b	99	48.773	ENSCJAG00000001740	SALL1	99	49.223	Callithrix_jacchus
ENSIPUG00000022928	sall1b	92	56.140	ENSCAFG00000009755	SALL1	92	56.140	Canis_familiaris
ENSIPUG00000022928	sall1b	99	47.319	ENSCAFG00020002842	SALL1	99	48.741	Canis_lupus_dingo
ENSIPUG00000022928	sall1b	99	48.438	ENSCHIG00000026074	SALL1	99	48.933	Capra_hircus
ENSIPUG00000022928	sall1b	99	48.998	ENSTSYG00000029464	SALL1	99	48.817	Carlito_syrichta
ENSIPUG00000022928	sall1b	97	49.387	ENSCPOG00000006564	SALL1	99	49.807	Cavia_porcellus
ENSIPUG00000022928	sall1b	99	47.700	ENSCCAG00000001639	SALL1	99	47.997	Cebus_capucinus
ENSIPUG00000022928	sall1b	99	48.050	ENSCATG00000004982	SALL1	99	48.960	Cercocebus_atys
ENSIPUG00000022928	sall1b	99	48.882	ENSCLAG00000006380	SALL1	99	49.364	Chinchilla_lanigera
ENSIPUG00000022928	sall1b	99	47.334	ENSCSAG00000005319	SALL1	99	48.088	Chlorocebus_sabaeus
ENSIPUG00000022928	sall1b	59	61.084	ENSCHOG00000000800	-	59	61.084	Choloepus_hoffmanni
ENSIPUG00000022928	sall1b	99	50.299	ENSCPBG00000015924	SALL1	95	56.140	Chrysemys_picta_bellii
ENSIPUG00000022928	sall1b	99	48.582	ENSCANG00000036664	SALL1	99	49.030	Colobus_angolensis_palliatus
ENSIPUG00000022928	sall1b	99	49.178	ENSCGRG00001023314	-	99	49.145	Cricetulus_griseus_chok1gshd
ENSIPUG00000022928	sall1b	97	49.499	ENSCGRG00000009496	Sall1	99	49.463	Cricetulus_griseus_crigri
ENSIPUG00000022928	sall1b	99	50.151	ENSCSEG00000009349	sall1a	99	50.265	Cynoglossus_semilaevis
ENSIPUG00000022928	sall1b	90	63.830	ENSCVAG00000020513	sall1a	99	63.830	Cyprinodon_variegatus
ENSIPUG00000022928	sall1b	99	48.794	ENSDARG00000075891	sall1b	99	48.792	Danio_rerio
ENSIPUG00000022928	sall1b	99	50.414	ENSDARG00000074319	sall1a	99	50.414	Danio_rerio
ENSIPUG00000022928	sall1b	99	48.958	ENSDNOG00000016413	SALL1	99	49.069	Dasypus_novemcinctus
ENSIPUG00000022928	sall1b	97	48.911	ENSETEG00000015150	SALL1	99	49.276	Echinops_telfairi
ENSIPUG00000022928	sall1b	74	59.420	ENSEBUG00000011732	SALL1	97	59.420	Eptatretus_burgeri
ENSIPUG00000022928	sall1b	99	48.920	ENSEASG00005014602	SALL1	99	48.960	Equus_asinus_asinus
ENSIPUG00000022928	sall1b	91	61.224	ENSECAG00000011334	SALL1	99	61.224	Equus_caballus
ENSIPUG00000022928	sall1b	97	48.081	ENSEEUG00000002014	SALL1	99	49.162	Erinaceus_europaeus
ENSIPUG00000022928	sall1b	99	47.622	ENSELUG00000006159	sall1a	99	48.125	Esox_lucius
ENSIPUG00000022928	sall1b	97	46.522	ENSELUG00000017774	-	97	46.343	Esox_lucius
ENSIPUG00000022928	sall1b	70	53.348	ENSFCAG00000024654	SALL1	99	48.837	Felis_catus
ENSIPUG00000022928	sall1b	99	50.000	ENSFALG00000000074	SALL1	99	50.000	Ficedula_albicollis
ENSIPUG00000022928	sall1b	82	61.224	ENSFHEG00000008424	-	86	61.224	Fundulus_heteroclitus
ENSIPUG00000022928	sall1b	99	49.849	ENSFHEG00000012579	sall1a	99	50.076	Fundulus_heteroclitus
ENSIPUG00000022928	sall1b	90	62.963	ENSGMOG00000013383	-	77	63.265	Gadus_morhua
ENSIPUG00000022928	sall1b	99	50.264	ENSGMOG00000006103	sall1a	99	50.113	Gadus_morhua
ENSIPUG00000022928	sall1b	99	49.814	ENSGALG00000039238	SALL1	99	49.740	Gallus_gallus
ENSIPUG00000022928	sall1b	99	50.490	ENSGAFG00000009964	sall1a	99	50.716	Gambusia_affinis
ENSIPUG00000022928	sall1b	99	50.151	ENSGACG00000016702	sall1a	99	50.189	Gasterosteus_aculeatus
ENSIPUG00000022928	sall1b	99	50.150	ENSGAGG00000013979	SALL1	99	50.075	Gopherus_agassizii
ENSIPUG00000022928	sall1b	99	48.663	ENSGGOG00000000663	SALL1	99	48.964	Gorilla_gorilla
ENSIPUG00000022928	sall1b	99	49.735	ENSHBUG00000022005	sall1a	99	50.410	Haplochromis_burtoni
ENSIPUG00000022928	sall1b	99	48.291	ENSHGLG00000004288	-	99	48.927	Heterocephalus_glaber_female
ENSIPUG00000022928	sall1b	99	48.291	ENSHGLG00100017496	SALL1	99	48.927	Heterocephalus_glaber_male
ENSIPUG00000022928	sall1b	99	49.400	ENSHCOG00000000974	sall1a	99	49.475	Hippocampus_comes
ENSIPUG00000022928	sall1b	99	48.622	ENSSTOG00000020885	SALL1	99	48.846	Ictidomys_tridecemlineatus
ENSIPUG00000022928	sall1b	99	50.301	ENSKMAG00000016681	sall1a	99	50.680	Kryptolebias_marmoratus
ENSIPUG00000022928	sall1b	97	49.457	ENSLBEG00000012207	sall1a	95	49.496	Labrus_bergylta
ENSIPUG00000022928	sall1b	91	35.609	ENSLACG00000014018	-	93	35.452	Latimeria_chalumnae
ENSIPUG00000022928	sall1b	99	50.075	ENSLACG00000003556	SALL1	99	49.887	Latimeria_chalumnae
ENSIPUG00000022928	sall1b	99	50.898	ENSLOCG00000007283	sall1b	99	50.898	Lepisosteus_oculatus
ENSIPUG00000022928	sall1b	97	48.630	ENSLAFG00000015251	SALL1	99	49.461	Loxodonta_africana
ENSIPUG00000022928	sall1b	99	48.588	ENSMFAG00000003298	SALL1	99	49.034	Macaca_fascicularis
ENSIPUG00000022928	sall1b	87	51.067	ENSMMUG00000017200	SALL1	94	51.438	Macaca_mulatta
ENSIPUG00000022928	sall1b	87	51.067	ENSMNEG00000034770	SALL1	97	50.536	Macaca_nemestrina
ENSIPUG00000022928	sall1b	99	48.657	ENSMLEG00000036406	SALL1	99	49.104	Mandrillus_leucophaeus
ENSIPUG00000022928	sall1b	99	50.301	ENSMAMG00000004164	sall1a	99	50.976	Mastacembelus_armatus
ENSIPUG00000022928	sall1b	99	49.659	ENSMZEG00005006479	sall1a	99	50.328	Maylandia_zebra
ENSIPUG00000022928	sall1b	97	49.962	ENSMGAG00000004704	SALL1	99	49.962	Meleagris_gallopavo
ENSIPUG00000022928	sall1b	99	48.063	ENSMAUG00000019093	Sall1	99	48.291	Mesocricetus_auratus
ENSIPUG00000022928	sall1b	99	48.808	ENSMICG00000036486	SALL1	99	48.808	Microcebus_murinus
ENSIPUG00000022928	sall1b	99	50.493	ENSMMOG00000016400	sall1a	99	50.531	Mola_mola
ENSIPUG00000022928	sall1b	99	49.184	ENSMODG00000013114	SALL1	99	49.439	Monodelphis_domestica
ENSIPUG00000022928	sall1b	99	50.526	ENSMALG00000013400	sall1a	99	50.601	Monopterus_albus
ENSIPUG00000022928	sall1b	99	49.442	MGP_CAROLIEiJ_G0031362	Sall1	99	49.515	Mus_caroli
ENSIPUG00000022928	sall1b	99	49.255	ENSMUSG00000031665	Sall1	99	49.553	Mus_musculus
ENSIPUG00000022928	sall1b	99	48.856	MGP_PahariEiJ_G0022961	Sall1	99	49.553	Mus_pahari
ENSIPUG00000022928	sall1b	99	49.180	MGP_SPRETEiJ_G0032480	Sall1	99	49.478	Mus_spretus
ENSIPUG00000022928	sall1b	97	47.510	ENSMLUG00000015541	SALL1	98	48.162	Myotis_lucifugus
ENSIPUG00000022928	sall1b	99	49.810	ENSNBRG00000009307	sall1a	99	50.574	Neolamprologus_brichardi
ENSIPUG00000022928	sall1b	97	44.806	ENSNLEG00000001008	SALL1	98	45.293	Nomascus_leucogenys
ENSIPUG00000022928	sall1b	99	49.110	ENSMEUG00000012206	SALL1	99	49.516	Notamacropus_eugenii
ENSIPUG00000022928	sall1b	86	59.615	ENSOPRG00000005645	SALL1	71	59.615	Ochotona_princeps
ENSIPUG00000022928	sall1b	99	48.339	ENSODEG00000003685	SALL1	99	49.037	Octodon_degus
ENSIPUG00000022928	sall1b	99	49.848	ENSONIG00000002831	sall1a	99	56.140	Oreochromis_niloticus
ENSIPUG00000022928	sall1b	81	73.333	ENSOANG00000013399	SALL1	94	73.333	Ornithorhynchus_anatinus
ENSIPUG00000022928	sall1b	99	50.075	ENSORLG00000013827	sall1a	97	52.446	Oryzias_latipes
ENSIPUG00000022928	sall1b	99	50.151	ENSORLG00020020570	sall1a	99	50.377	Oryzias_latipes_hni
ENSIPUG00000022928	sall1b	99	50.226	ENSORLG00015018830	sall1a	97	52.532	Oryzias_latipes_hsok
ENSIPUG00000022928	sall1b	99	50.076	ENSOMEG00000016043	sall1a	99	50.566	Oryzias_melastigma
ENSIPUG00000022928	sall1b	99	49.107	ENSOGAG00000027316	SALL1	99	49.107	Otolemur_garnettii
ENSIPUG00000022928	sall1b	99	45.665	ENSOARG00000017583	SALL1	99	45.243	Ovis_aries
ENSIPUG00000022928	sall1b	97	48.926	ENSPPAG00000035657	SALL1	99	49.237	Pan_paniscus
ENSIPUG00000022928	sall1b	69	37.809	ENSPPAG00000035136	-	97	37.037	Pan_paniscus
ENSIPUG00000022928	sall1b	70	53.340	ENSPPRG00000023283	SALL1	99	48.766	Panthera_pardus
ENSIPUG00000022928	sall1b	68	69.591	ENSPTIG00000013539	-	95	61.702	Panthera_tigris_altaica
ENSIPUG00000022928	sall1b	99	48.478	ENSPTRG00000008108	SALL1	99	48.891	Pan_troglodytes
ENSIPUG00000022928	sall1b	67	38.206	ENSPTRG00000045256	-	97	36.895	Pan_troglodytes
ENSIPUG00000022928	sall1b	99	48.657	ENSPANG00000024176	SALL1	99	49.104	Papio_anubis
ENSIPUG00000022928	sall1b	99	48.685	ENSPKIG00000022251	sall1a	99	48.837	Paramormyrops_kingsleyae
ENSIPUG00000022928	sall1b	99	50.076	ENSPKIG00000005383	-	99	50.114	Paramormyrops_kingsleyae
ENSIPUG00000022928	sall1b	99	50.186	ENSPSIG00000008582	SALL1	99	50.186	Pelodiscus_sinensis
ENSIPUG00000022928	sall1b	99	49.398	ENSPMGG00000021788	sall1a	99	49.663	Periophthalmus_magnuspinnatus
ENSIPUG00000022928	sall1b	91	61.538	ENSPMAG00000008148	sall1b	96	61.538	Petromyzon_marinus
ENSIPUG00000022928	sall1b	99	48.813	ENSPCIG00000017840	SALL1	99	49.218	Phascolarctos_cinereus
ENSIPUG00000022928	sall1b	97	51.242	ENSPFOG00000015799	sall1a	94	51.475	Poecilia_formosa
ENSIPUG00000022928	sall1b	99	50.865	ENSPLAG00000022539	sall1a	99	51.091	Poecilia_latipinna
ENSIPUG00000022928	sall1b	99	50.791	ENSPMEG00000020894	sall1a	99	51.017	Poecilia_mexicana
ENSIPUG00000022928	sall1b	99	50.491	ENSPREG00000006802	sall1a	99	50.717	Poecilia_reticulata
ENSIPUG00000022928	sall1b	91	56.140	ENSPPYG00000007345	SALL1	95	56.140	Pongo_abelii
ENSIPUG00000022928	sall1b	85	56.140	ENSPCAG00000008162	SALL1	92	56.140	Procavia_capensis
ENSIPUG00000022928	sall1b	99	48.276	ENSPCOG00000028192	SALL1	99	48.782	Propithecus_coquereli
ENSIPUG00000022928	sall1b	67	59.615	ENSPVAG00000015374	SALL1	99	59.615	Pteropus_vampyrus
ENSIPUG00000022928	sall1b	99	49.735	ENSPNYG00000010865	sall1a	99	50.410	Pundamilia_nyererei
ENSIPUG00000022928	sall1b	99	65.325	ENSPNAG00000007442	sall1b	100	66.048	Pygocentrus_nattereri
ENSIPUG00000022928	sall1b	84	63.265	ENSPNAG00000028248	-	80	63.265	Pygocentrus_nattereri
ENSIPUG00000022928	sall1b	99	48.865	ENSPNAG00000023644	sall1a	99	48.411	Pygocentrus_nattereri
ENSIPUG00000022928	sall1b	99	48.820	ENSRNOG00000013907	Sall1	99	49.219	Rattus_norvegicus
ENSIPUG00000022928	sall1b	87	51.067	ENSRBIG00000015707	SALL1	95	51.438	Rhinopithecus_bieti
ENSIPUG00000022928	sall1b	97	48.812	ENSRROG00000035777	SALL1	98	49.272	Rhinopithecus_roxellana
ENSIPUG00000022928	sall1b	99	48.741	ENSSBOG00000032186	SALL1	99	48.968	Saimiri_boliviensis_boliviensis
ENSIPUG00000022928	sall1b	99	49.439	ENSSHAG00000009477	SALL1	99	49.403	Sarcophilus_harrisii
ENSIPUG00000022928	sall1b	98	49.808	ENSSFOG00015001590	sall1a	99	49.847	Scleropages_formosus
ENSIPUG00000022928	sall1b	99	49.622	ENSSFOG00015020020	sall1a	99	50.302	Scleropages_formosus
ENSIPUG00000022928	sall1b	99	50.302	ENSSMAG00000009160	sall1a	99	50.529	Scophthalmus_maximus
ENSIPUG00000022928	sall1b	99	51.098	ENSSDUG00000006507	sall1a	99	51.764	Seriola_dumerili
ENSIPUG00000022928	sall1b	93	67.442	ENSSDUG00000000748	sall1b	99	57.143	Seriola_dumerili
ENSIPUG00000022928	sall1b	99	50.946	ENSSLDG00000017721	sall1a	99	51.173	Seriola_lalandi_dorsalis
ENSIPUG00000022928	sall1b	59	71.250	ENSSLDG00000014465	-	87	71.250	Seriola_lalandi_dorsalis
ENSIPUG00000022928	sall1b	97	48.331	ENSSARG00000000661	SALL1	99	49.156	Sorex_araneus
ENSIPUG00000022928	sall1b	99	49.849	ENSSPUG00000000156	SALL1	99	49.775	Sphenodon_punctatus
ENSIPUG00000022928	sall1b	99	50.416	ENSSPAG00000021615	sall1a	99	50.643	Stegastes_partitus
ENSIPUG00000022928	sall1b	99	48.140	ENSSSCG00000002836	SALL1	99	48.750	Sus_scrofa
ENSIPUG00000022928	sall1b	99	49.925	ENSTGUG00000007514	SALL1	99	49.925	Taeniopygia_guttata
ENSIPUG00000022928	sall1b	90	60.345	ENSTRUG00000008950	sall1a	93	60.345	Takifugu_rubripes
ENSIPUG00000022928	sall1b	92	50.082	ENSTNIG00000004257	sall1a	100	50.575	Tetraodon_nigroviridis
ENSIPUG00000022928	sall1b	60	56.140	ENSTBEG00000002119	-	52	56.140	Tupaia_belangeri
ENSIPUG00000022928	sall1b	90	56.140	ENSUAMG00000023379	-	92	56.140	Ursus_americanus
ENSIPUG00000022928	sall1b	91	56.140	ENSVVUG00000019383	-	99	56.140	Vulpes_vulpes
ENSIPUG00000022928	sall1b	88	50.633	ENSXETG00000017176	sall2	62	50.633	Xenopus_tropicalis
ENSIPUG00000022928	sall1b	99	46.921	ENSXETG00000018417	sall1	99	47.141	Xenopus_tropicalis
ENSIPUG00000022928	sall1b	99	50.565	ENSXMAG00000016273	sall1a	99	50.791	Xiphophorus_maculatus