EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000022931 (Gene tree)
Gene ID: 108267459
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 3241 bases
Position: chr7:15261872-15265112
Accession: 108267459
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000034124	zf-CCHC	PF00098.23	1.3e-07	1	1
ENSIPUP00000034124	RRM_5	PF13893.6	4.8e-06	1	1
ENSIPUP00000034124	RRM_1	PF00076.22	4e-35	1	2
ENSIPUP00000034124	RRM_1	PF00076.22	4e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000035463	-	2774	XM_017471530	ENSIPUP00000034124	428 (aa)	XP_017327019	W5U754

Gene Model

Click here to download ENSIPUG00000022931's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000022931's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000022931	rbm4.1	100	51.395	ENSIPUG00000022937	rbm4.2	100	50.808

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000022931	rbm4.1	100	65.604	ENSAPOG00000012353	rbm4.1	100	64.840	Acanthochromis_polyacanthus
ENSIPUG00000022931	rbm4.1	100	63.470	ENSACIG00000016482	rbm4.1	100	62.385	Amphilophus_citrinellus
ENSIPUG00000022931	rbm4.1	100	65.604	ENSAOCG00000010915	rbm4.1	100	64.840	Amphiprion_ocellaris
ENSIPUG00000022931	rbm4.1	100	65.604	ENSAPEG00000009494	rbm4.1	100	64.840	Amphiprion_percula
ENSIPUG00000022931	rbm4.1	100	65.455	ENSATEG00000001904	rbm4.1	100	64.384	Anabas_testudineus
ENSIPUG00000022931	rbm4.1	99	46.172	ENSACLG00000007740	-	99	46.712	Astatotilapia_calliptera
ENSIPUG00000022931	rbm4.1	100	63.699	ENSACLG00000007722	rbm4.1	100	62.615	Astatotilapia_calliptera
ENSIPUG00000022931	rbm4.1	100	72.196	ENSAMXG00000036611	rbm4.1	100	70.794	Astyanax_mexicanus
ENSIPUG00000022931	rbm4.1	100	57.809	ENSCSEG00000014365	rbm4.1	100	55.734	Cynoglossus_semilaevis
ENSIPUG00000022931	rbm4.1	99	48.843	ENSCSEG00000014359	-	50	67.692	Cynoglossus_semilaevis
ENSIPUG00000022931	rbm4.1	100	60.998	ENSCVAG00000019349	rbm4.1	100	60.820	Cyprinodon_variegatus
ENSIPUG00000022931	rbm4.1	100	71.954	ENSDARG00000036386	rbm4.1	100	70.115	Danio_rerio
ENSIPUG00000022931	rbm4.1	100	51.620	ENSDARG00000055080	rbm4.2	100	52.414	Danio_rerio
ENSIPUG00000022931	rbm4.1	100	65.982	ENSELUG00000013205	rbm4.1	100	65.760	Esox_lucius
ENSIPUG00000022931	rbm4.1	100	61.591	ENSFHEG00000022926	rbm4.1	100	59.773	Fundulus_heteroclitus
ENSIPUG00000022931	rbm4.1	92	51.000	ENSGMOG00000007455	-	99	50.564	Gadus_morhua
ENSIPUG00000022931	rbm4.1	100	59.685	ENSGMOG00000007464	rbm4.1	100	59.732	Gadus_morhua
ENSIPUG00000022931	rbm4.1	100	62.132	ENSGAFG00000019302	rbm4.1	100	60.909	Gambusia_affinis
ENSIPUG00000022931	rbm4.1	99	48.009	ENSGACG00000000821	-	99	47.640	Gasterosteus_aculeatus
ENSIPUG00000022931	rbm4.1	99	83.333	ENSGACG00000000822	rbm4.1	100	83.333	Gasterosteus_aculeatus
ENSIPUG00000022931	rbm4.1	100	63.699	ENSHBUG00000011610	rbm4.1	100	62.615	Haplochromis_burtoni
ENSIPUG00000022931	rbm4.1	93	61.153	ENSHCOG00000011403	rbm4.1	95	61.654	Hippocampus_comes
ENSIPUG00000022931	rbm4.1	100	61.187	ENSKMAG00000006556	rbm4.1	100	60.046	Kryptolebias_marmoratus
ENSIPUG00000022931	rbm4.1	100	61.591	ENSLBEG00000019782	rbm4.1	100	61.187	Labrus_bergylta
ENSIPUG00000022931	rbm4.1	99	48.000	ENSLBEG00000019756	-	90	63.462	Labrus_bergylta
ENSIPUG00000022931	rbm4.1	99	48.951	ENSMAMG00000001760	-	99	48.724	Mastacembelus_armatus
ENSIPUG00000022931	rbm4.1	100	63.636	ENSMAMG00000001765	rbm4.1	100	63.470	Mastacembelus_armatus
ENSIPUG00000022931	rbm4.1	100	63.699	ENSMZEG00005009205	rbm4.1	100	62.615	Maylandia_zebra
ENSIPUG00000022931	rbm4.1	100	62.727	ENSMMOG00000020479	rbm4.1	100	62.273	Mola_mola
ENSIPUG00000022931	rbm4.1	100	64.091	ENSMALG00000020544	rbm4.1	100	62.785	Monopterus_albus
ENSIPUG00000022931	rbm4.1	99	49.767	ENSMALG00000020557	-	99	50.701	Monopterus_albus
ENSIPUG00000022931	rbm4.1	100	63.699	ENSNBRG00000017755	rbm4.1	100	62.615	Neolamprologus_brichardi
ENSIPUG00000022931	rbm4.1	100	63.699	ENSONIG00000015730	rbm4.1	100	62.615	Oreochromis_niloticus
ENSIPUG00000022931	rbm4.1	100	58.904	ENSORLG00000012496	rbm4.1	100	58.581	Oryzias_latipes
ENSIPUG00000022931	rbm4.1	100	58.904	ENSORLG00020012454	rbm4.1	100	58.581	Oryzias_latipes_hni
ENSIPUG00000022931	rbm4.1	100	58.904	ENSORLG00015013678	rbm4.1	100	58.581	Oryzias_latipes_hsok
ENSIPUG00000022931	rbm4.1	100	59.361	ENSOMEG00000001001	rbm4.1	100	58.810	Oryzias_melastigma
ENSIPUG00000022931	rbm4.1	100	64.760	ENSPKIG00000020805	rbm4.1	87	84.783	Paramormyrops_kingsleyae
ENSIPUG00000022931	rbm4.1	99	46.099	ENSPFOG00000012685	-	99	46.588	Poecilia_formosa
ENSIPUG00000022931	rbm4.1	100	62.132	ENSPFOG00000012675	rbm4.1	100	60.909	Poecilia_formosa
ENSIPUG00000022931	rbm4.1	100	62.132	ENSPLAG00000018572	rbm4.1	100	60.909	Poecilia_latipinna
ENSIPUG00000022931	rbm4.1	100	62.132	ENSPMEG00000006290	rbm4.1	100	60.909	Poecilia_mexicana
ENSIPUG00000022931	rbm4.1	99	63.547	ENSPREG00000003764	-	96	67.742	Poecilia_reticulata
ENSIPUG00000022931	rbm4.1	100	62.132	ENSPREG00000003724	rbm4.1	100	60.909	Poecilia_reticulata
ENSIPUG00000022931	rbm4.1	100	63.699	ENSPNYG00000004662	rbm4.1	100	62.615	Pundamilia_nyererei
ENSIPUG00000022931	rbm4.1	100	50.580	ENSPNAG00000013057	rbm4.2	100	51.157	Pygocentrus_nattereri
ENSIPUG00000022931	rbm4.1	100	76.102	ENSPNAG00000002539	rbm4.1	100	77.209	Pygocentrus_nattereri
ENSIPUG00000022931	rbm4.1	100	63.554	ENSSFOG00015021996	sf1	100	63.554	Scleropages_formosus
ENSIPUG00000022931	rbm4.1	100	63.098	ENSSMAG00000007571	rbm4.1	100	62.329	Scophthalmus_maximus
ENSIPUG00000022931	rbm4.1	100	65.068	ENSSDUG00000003925	rbm4.1	100	64.155	Seriola_dumerili
ENSIPUG00000022931	rbm4.1	99	51.288	ENSSDUG00000003936	-	99	51.860	Seriola_dumerili
ENSIPUG00000022931	rbm4.1	100	65.068	ENSSLDG00000013147	rbm4.1	100	64.155	Seriola_lalandi_dorsalis
ENSIPUG00000022931	rbm4.1	99	48.821	ENSSLDG00000013157	-	99	49.324	Seriola_lalandi_dorsalis
ENSIPUG00000022931	rbm4.1	100	63.991	ENSSPAG00000019053	rbm4.1	100	64.155	Stegastes_partitus
ENSIPUG00000022931	rbm4.1	99	47.897	ENSSPAG00000019046	-	99	46.934	Stegastes_partitus
ENSIPUG00000022931	rbm4.1	100	60.091	ENSTRUG00000013334	rbm4.1	100	59.132	Takifugu_rubripes
ENSIPUG00000022931	rbm4.1	99	46.099	ENSTRUG00000013328	-	99	45.093	Takifugu_rubripes
ENSIPUG00000022931	rbm4.1	100	77.500	ENSTNIG00000004821	rbm4.1	98	77.889	Tetraodon_nigroviridis
ENSIPUG00000022931	rbm4.1	88	67.188	ENSXETG00000026649	rbm4b	94	65.990	Xenopus_tropicalis
ENSIPUG00000022931	rbm4.1	100	61.905	ENSXCOG00000003731	rbm4.1	100	60.682	Xiphophorus_couchianus
ENSIPUG00000022931	rbm4.1	100	61.905	ENSXMAG00000008069	rbm4.1	100	60.682	Xiphophorus_maculatus
ENSIPUG00000022931	rbm4.1	94	72.393	ENSXMAG00000008059	-	87	69.355	Xiphophorus_maculatus