EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000022937 (Gene tree)
Gene ID: 108267460
Gene Symbol: rbm4.2
Alias: rbm4l|wu:fc25a01
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 1528 bases
Position: chr7:15268647-15270174
Accession: 108267460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000034134	zf-CCHC	PF00098.23	1.2e-06	1	1
ENSIPUP00000034134	RRM_5	PF13893.6	6.1e-09	1	2
ENSIPUP00000034134	RRM_5	PF13893.6	6.1e-09	2	2
ENSIPUP00000034134	RRM_1	PF00076.22	1e-34	1	2
ENSIPUP00000034134	RRM_1	PF00076.22	1e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000035474	-	1146	XM_017471533	ENSIPUP00000034134	381 (aa)	XP_017327022	A0A2D0R8W6

Gene Model

Click here to download ENSIPUG00000022937's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000022937's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000022937	rbm4.2	100	50.808	ENSIPUG00000022931	rbm4.1	100	51.395

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000022937	rbm4.2	100	50.698	ENSAPOG00000012353	rbm4.1	100	51.168	Acanthochromis_polyacanthus
ENSIPUG00000022937	rbm4.2	100	49.302	ENSACIG00000016482	rbm4.1	100	50.118	Amphilophus_citrinellus
ENSIPUG00000022937	rbm4.2	100	50.701	ENSAOCG00000010915	rbm4.1	100	50.708	Amphiprion_ocellaris
ENSIPUG00000022937	rbm4.2	100	50.701	ENSAPEG00000009494	rbm4.1	100	50.708	Amphiprion_percula
ENSIPUG00000022937	rbm4.2	100	49.769	ENSATEG00000001904	rbm4.1	100	50.353	Anabas_testudineus
ENSIPUG00000022937	rbm4.2	100	48.956	ENSACLG00000007722	rbm4.1	100	49.409	Astatotilapia_calliptera
ENSIPUG00000022937	rbm4.2	97	49.871	ENSACLG00000007740	-	93	51.213	Astatotilapia_calliptera
ENSIPUG00000022937	rbm4.2	100	56.599	ENSAMXG00000036611	rbm4.1	100	56.633	Astyanax_mexicanus
ENSIPUG00000022937	rbm4.2	100	48.227	ENSCSEG00000014365	rbm4.1	94	49.109	Cynoglossus_semilaevis
ENSIPUG00000022937	rbm4.2	99	52.792	ENSCSEG00000014359	-	94	51.752	Cynoglossus_semilaevis
ENSIPUG00000022937	rbm4.2	100	47.418	ENSCVAG00000019349	rbm4.1	100	48.456	Cyprinodon_variegatus
ENSIPUG00000022937	rbm4.2	100	67.949	ENSDARG00000055080	rbm4.2	100	68.205	Danio_rerio
ENSIPUG00000022937	rbm4.2	100	53.756	ENSDARG00000036386	rbm4.1	79	77.536	Danio_rerio
ENSIPUG00000022937	rbm4.2	100	51.773	ENSELUG00000013205	rbm4.1	93	51.654	Esox_lucius
ENSIPUG00000022937	rbm4.2	100	50.118	ENSFHEG00000022926	rbm4.1	100	49.406	Fundulus_heteroclitus
ENSIPUG00000022937	rbm4.2	92	53.552	ENSGMOG00000007455	-	92	56.749	Gadus_morhua
ENSIPUG00000022937	rbm4.2	100	50.355	ENSGAFG00000019302	rbm4.1	100	49.644	Gambusia_affinis
ENSIPUG00000022937	rbm4.2	99	50.518	ENSGACG00000000822	rbm4.1	93	51.253	Gasterosteus_aculeatus
ENSIPUG00000022937	rbm4.2	98	49.479	ENSGACG00000000821	-	93	51.630	Gasterosteus_aculeatus
ENSIPUG00000022937	rbm4.2	100	48.956	ENSHBUG00000011610	rbm4.1	100	49.409	Haplochromis_burtoni
ENSIPUG00000022937	rbm4.2	92	50.130	ENSHCOG00000011403	rbm4.1	95	49.869	Hippocampus_comes
ENSIPUG00000022937	rbm4.2	100	46.301	ENSKMAG00000006556	rbm4.1	100	47.170	Kryptolebias_marmoratus
ENSIPUG00000022937	rbm4.2	99	52.713	ENSLBEG00000019756	-	93	56.438	Labrus_bergylta
ENSIPUG00000022937	rbm4.2	100	49.883	ENSLBEG00000019782	rbm4.1	100	49.176	Labrus_bergylta
ENSIPUG00000022937	rbm4.2	100	50.117	ENSMAMG00000001765	rbm4.1	100	49.882	Mastacembelus_armatus
ENSIPUG00000022937	rbm4.2	97	53.590	ENSMAMG00000001760	-	93	53.659	Mastacembelus_armatus
ENSIPUG00000022937	rbm4.2	100	48.956	ENSMZEG00005009205	rbm4.1	100	49.409	Maylandia_zebra
ENSIPUG00000022937	rbm4.2	100	48.618	ENSMMOG00000020479	rbm4.1	100	48.848	Mola_mola
ENSIPUG00000022937	rbm4.2	97	52.468	ENSMALG00000020557	-	93	54.178	Monopterus_albus
ENSIPUG00000022937	rbm4.2	100	51.869	ENSMALG00000020544	rbm4.1	100	51.179	Monopterus_albus
ENSIPUG00000022937	rbm4.2	100	48.956	ENSNBRG00000017755	rbm4.1	100	49.409	Neolamprologus_brichardi
ENSIPUG00000022937	rbm4.2	100	48.956	ENSONIG00000015730	rbm4.1	100	49.409	Oreochromis_niloticus
ENSIPUG00000022937	rbm4.2	100	48.463	ENSORLG00000012496	rbm4.1	100	48.113	Oryzias_latipes
ENSIPUG00000022937	rbm4.2	100	48.463	ENSORLG00020012454	rbm4.1	100	48.113	Oryzias_latipes_hni
ENSIPUG00000022937	rbm4.2	100	48.463	ENSORLG00015013678	rbm4.1	100	48.113	Oryzias_latipes_hsok
ENSIPUG00000022937	rbm4.2	100	48.700	ENSOMEG00000001001	rbm4.1	100	48.341	Oryzias_melastigma
ENSIPUG00000022937	rbm4.2	100	53.846	ENSPKIG00000020805	rbm4.1	85	76.087	Paramormyrops_kingsleyae
ENSIPUG00000022937	rbm4.2	57	50.230	ENSPMAG00000003433	rbm4.2	95	51.244	Petromyzon_marinus
ENSIPUG00000022937	rbm4.2	97	51.047	ENSPFOG00000012685	-	93	50.959	Poecilia_formosa
ENSIPUG00000022937	rbm4.2	100	50.355	ENSPFOG00000012675	rbm4.1	100	49.644	Poecilia_formosa
ENSIPUG00000022937	rbm4.2	100	50.355	ENSPLAG00000018572	rbm4.1	100	49.644	Poecilia_latipinna
ENSIPUG00000022937	rbm4.2	100	50.355	ENSPMEG00000006290	rbm4.1	100	49.644	Poecilia_mexicana
ENSIPUG00000022937	rbm4.2	97	48.429	ENSPREG00000003764	-	93	47.397	Poecilia_reticulata
ENSIPUG00000022937	rbm4.2	100	50.355	ENSPREG00000003724	rbm4.1	100	49.644	Poecilia_reticulata
ENSIPUG00000022937	rbm4.2	100	48.956	ENSPNYG00000004662	rbm4.1	100	49.409	Pundamilia_nyererei
ENSIPUG00000022937	rbm4.2	100	74.805	ENSPNAG00000013057	rbm4.2	100	74.026	Pygocentrus_nattereri
ENSIPUG00000022937	rbm4.2	100	54.502	ENSPNAG00000002539	rbm4.1	100	55.000	Pygocentrus_nattereri
ENSIPUG00000022937	rbm4.2	100	55.164	ENSSFOG00015021996	sf1	100	55.869	Scleropages_formosus
ENSIPUG00000022937	rbm4.2	100	48.585	ENSSMAG00000007571	rbm4.1	100	48.946	Scophthalmus_maximus
ENSIPUG00000022937	rbm4.2	97	54.242	ENSSDUG00000003936	-	94	56.065	Seriola_dumerili
ENSIPUG00000022937	rbm4.2	100	49.065	ENSSDUG00000003925	rbm4.1	100	49.647	Seriola_dumerili
ENSIPUG00000022937	rbm4.2	97	53.488	ENSSLDG00000013157	-	94	56.065	Seriola_lalandi_dorsalis
ENSIPUG00000022937	rbm4.2	100	49.065	ENSSLDG00000013147	rbm4.1	100	49.647	Seriola_lalandi_dorsalis
ENSIPUG00000022937	rbm4.2	97	52.577	ENSSPAG00000019046	-	93	50.674	Stegastes_partitus
ENSIPUG00000022937	rbm4.2	100	48.951	ENSSPAG00000019053	rbm4.1	100	49.296	Stegastes_partitus
ENSIPUG00000022937	rbm4.2	100	48.140	ENSTRUG00000013334	rbm4.1	100	46.919	Takifugu_rubripes
ENSIPUG00000022937	rbm4.2	96	48.413	ENSTRUG00000013328	-	93	48.087	Takifugu_rubripes
ENSIPUG00000022937	rbm4.2	100	47.656	ENSTNIG00000004821	rbm4.1	90	68.333	Tetraodon_nigroviridis
ENSIPUG00000022937	rbm4.2	97	49.096	ENSTNIG00000000316	-	93	48.919	Tetraodon_nigroviridis
ENSIPUG00000022937	rbm4.2	81	45.277	ENSXETG00000026649	rbm4b	92	44.507	Xenopus_tropicalis
ENSIPUG00000022937	rbm4.2	100	50.355	ENSXCOG00000003731	rbm4.1	100	49.881	Xiphophorus_couchianus
ENSIPUG00000022937	rbm4.2	100	50.355	ENSXMAG00000008069	rbm4.1	100	49.881	Xiphophorus_maculatus
ENSIPUG00000022937	rbm4.2	97	50.262	ENSXMAG00000008059	-	93	49.315	Xiphophorus_maculatus