EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000022943 (Gene tree)
Gene ID: 108267461
Gene Symbol: RBM4B
Alias: fb55c03|fb78a04|fj36h04|wu:fb55c03|wu:fb78a04|wu:fj36h04|zgc:56141|zgc:77000
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 1128 bases
Position: chr7:15273562-15274689
Accession: 108267461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000034140	RRM_5	PF13893.6	8e-11	1	2
ENSIPUP00000034140	RRM_5	PF13893.6	8e-11	2	2
ENSIPUP00000034140	RRM_1	PF00076.22	6.4e-27	1	2
ENSIPUP00000034140	RRM_1	PF00076.22	6.4e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000035480	-	1041	XM_017471535	ENSIPUP00000034140	346 (aa)	XP_017327024	W5UCQ1

Gene Model

Click here to download ENSIPUG00000022943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000022943's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000022943	RBM4B	99	64.571	ENSAPOG00000002991	rbm4.3	99	64.571	Acanthochromis_polyacanthus
ENSIPUG00000022943	RBM4B	100	70.170	ENSAPOG00000002953	rbm4.3	100	69.318	Acanthochromis_polyacanthus
ENSIPUG00000022943	RBM4B	99	66.762	ENSACIG00000021295	rbm4.3	99	67.049	Amphilophus_citrinellus
ENSIPUG00000022943	RBM4B	100	66.193	ENSACIG00000021311	-	100	67.614	Amphilophus_citrinellus
ENSIPUG00000022943	RBM4B	100	70.655	ENSAOCG00000008015	rbm4.3	100	69.801	Amphiprion_ocellaris
ENSIPUG00000022943	RBM4B	99	66.092	ENSAOCG00000007992	rbm4.3	99	67.049	Amphiprion_ocellaris
ENSIPUG00000022943	RBM4B	99	66.092	ENSAPEG00000017288	rbm4.3	99	67.049	Amphiprion_percula
ENSIPUG00000022943	RBM4B	100	70.286	ENSAPEG00000017324	rbm4.3	100	69.429	Amphiprion_percula
ENSIPUG00000022943	RBM4B	100	70.085	ENSATEG00000019375	rbm4.3	100	69.801	Anabas_testudineus
ENSIPUG00000022943	RBM4B	97	62.170	ENSATEG00000019395	rbm4.3	96	63.050	Anabas_testudineus
ENSIPUG00000022943	RBM4B	100	67.330	ENSACLG00000010620	-	100	67.045	Astatotilapia_calliptera
ENSIPUG00000022943	RBM4B	97	65.487	ENSACLG00000010642	rbm4.3	96	64.897	Astatotilapia_calliptera
ENSIPUG00000022943	RBM4B	54	84.492	ENSAMXG00000040224	rbm4.3	77	84.409	Astyanax_mexicanus
ENSIPUG00000022943	RBM4B	100	65.722	ENSCSEG00000013659	rbm4.3	100	66.572	Cynoglossus_semilaevis
ENSIPUG00000022943	RBM4B	99	63.068	ENSCVAG00000008502	rbm4.3	99	63.920	Cyprinodon_variegatus
ENSIPUG00000022943	RBM4B	100	63.231	ENSCVAG00000008508	rbm4.3	100	64.607	Cyprinodon_variegatus
ENSIPUG00000022943	RBM4B	95	73.134	ENSDARG00000022129	rbm4.3	99	74.640	Danio_rerio
ENSIPUG00000022943	RBM4B	100	66.197	ENSELUG00000022168	rbm4.3	100	68.451	Esox_lucius
ENSIPUG00000022943	RBM4B	99	69.034	ENSELUG00000022155	rbm4.3	97	67.347	Esox_lucius
ENSIPUG00000022943	RBM4B	99	67.521	ENSELUG00000022150	rbm4.3	99	66.097	Esox_lucius
ENSIPUG00000022943	RBM4B	80	67.958	ENSFHEG00000023137	rbm4.3	86	67.870	Fundulus_heteroclitus
ENSIPUG00000022943	RBM4B	100	59.270	ENSGAFG00000001935	rbm4.3	100	58.146	Gambusia_affinis
ENSIPUG00000022943	RBM4B	96	62.647	ENSGACG00000019980	rbm4.3	95	61.765	Gasterosteus_aculeatus
ENSIPUG00000022943	RBM4B	100	67.330	ENSHBUG00000009020	-	100	67.045	Haplochromis_burtoni
ENSIPUG00000022943	RBM4B	97	66.077	ENSHBUG00000009051	rbm4.3	96	65.487	Haplochromis_burtoni
ENSIPUG00000022943	RBM4B	95	61.538	ENSHCOG00000010349	rbm4.3	100	63.305	Hippocampus_comes
ENSIPUG00000022943	RBM4B	100	64.789	ENSKMAG00000017468	rbm4.3	97	63.372	Kryptolebias_marmoratus
ENSIPUG00000022943	RBM4B	100	67.330	ENSLBEG00000001071	-	100	69.602	Labrus_bergylta
ENSIPUG00000022943	RBM4B	51	70.879	ENSLBEG00000001025	rbm4.3	82	70.879	Labrus_bergylta
ENSIPUG00000022943	RBM4B	95	60.548	ENSLOCG00000002755	rbm4.3	100	62.434	Lepisosteus_oculatus
ENSIPUG00000022943	RBM4B	100	69.801	ENSMAMG00000004715	-	81	69.412	Mastacembelus_armatus
ENSIPUG00000022943	RBM4B	97	63.824	ENSMAMG00000004701	rbm4.3	96	63.265	Mastacembelus_armatus
ENSIPUG00000022943	RBM4B	97	65.487	ENSMZEG00005028540	rbm4.3	96	64.897	Maylandia_zebra
ENSIPUG00000022943	RBM4B	100	64.205	ENSMZEG00005007417	-	100	63.920	Maylandia_zebra
ENSIPUG00000022943	RBM4B	84	65.870	ENSMZEG00005028537	-	83	64.846	Maylandia_zebra
ENSIPUG00000022943	RBM4B	85	65.657	ENSMZEG00005007441	rbm4.3	79	64.746	Maylandia_zebra
ENSIPUG00000022943	RBM4B	97	62.974	ENSMMOG00000012191	rbm4.3	96	61.808	Mola_mola
ENSIPUG00000022943	RBM4B	84	70.707	ENSMALG00000003001	rbm4.3	87	69.932	Monopterus_albus
ENSIPUG00000022943	RBM4B	94	61.398	ENSMALG00000003032	rbm4.3	99	56.560	Monopterus_albus
ENSIPUG00000022943	RBM4B	97	62.242	ENSMALG00000015014	-	96	57.790	Monopterus_albus
ENSIPUG00000022943	RBM4B	97	66.077	ENSNBRG00000012372	rbm4.3	96	64.897	Neolamprologus_brichardi
ENSIPUG00000022943	RBM4B	100	67.330	ENSONIG00000018380	-	100	67.045	Oreochromis_niloticus
ENSIPUG00000022943	RBM4B	97	66.765	ENSONIG00000018378	rbm4.3	96	66.176	Oreochromis_niloticus
ENSIPUG00000022943	RBM4B	100	60.497	ENSORLG00000011589	rbm4.3	100	61.050	Oryzias_latipes
ENSIPUG00000022943	RBM4B	97	58.065	ENSORLG00000024749	rbm4.3	96	57.185	Oryzias_latipes
ENSIPUG00000022943	RBM4B	100	60.221	ENSORLG00000012473	rbm4.3	100	60.497	Oryzias_latipes
ENSIPUG00000022943	RBM4B	98	58.960	ENSORLG00020012482	rbm4.3	97	57.478	Oryzias_latipes_hni
ENSIPUG00000022943	RBM4B	100	60.221	ENSORLG00020012464	rbm4.3	100	60.497	Oryzias_latipes_hni
ENSIPUG00000022943	RBM4B	100	60.497	ENSORLG00020012474	rbm4.3	100	60.773	Oryzias_latipes_hni
ENSIPUG00000022943	RBM4B	100	60.497	ENSORLG00015013698	rbm4.3	100	61.050	Oryzias_latipes_hsok
ENSIPUG00000022943	RBM4B	100	59.669	ENSORLG00015013686	rbm4.3	100	59.945	Oryzias_latipes_hsok
ENSIPUG00000022943	RBM4B	99	59.259	ENSORLG00015013721	rbm4.3	99	58.405	Oryzias_latipes_hsok
ENSIPUG00000022943	RBM4B	97	58.036	ENSOMEG00000005950	rbm4.3	96	59.412	Oryzias_melastigma
ENSIPUG00000022943	RBM4B	100	58.266	ENSOMEG00000005918	rbm4.3	93	63.526	Oryzias_melastigma
ENSIPUG00000022943	RBM4B	97	58.757	ENSOMEG00000005929	rbm4.3	97	60.114	Oryzias_melastigma
ENSIPUG00000022943	RBM4B	93	72.121	ENSPKIG00000007001	rbm4.3	97	70.746	Paramormyrops_kingsleyae
ENSIPUG00000022943	RBM4B	99	62.079	ENSPLAG00000006077	rbm4.3	99	61.690	Poecilia_latipinna
ENSIPUG00000022943	RBM4B	100	63.764	ENSPLAG00000006131	rbm4.3	100	63.202	Poecilia_latipinna
ENSIPUG00000022943	RBM4B	99	61.690	ENSPMEG00000024260	rbm4.3	99	62.429	Poecilia_mexicana
ENSIPUG00000022943	RBM4B	100	61.667	ENSPMEG00000024263	rbm4.3	100	63.483	Poecilia_mexicana
ENSIPUG00000022943	RBM4B	100	63.483	ENSPMEG00000024271	rbm4.3	100	62.921	Poecilia_mexicana
ENSIPUG00000022943	RBM4B	100	62.963	ENSPREG00000002156	rbm4.3	100	60.623	Poecilia_reticulata
ENSIPUG00000022943	RBM4B	98	62.644	ENSPREG00000002093	-	97	61.628	Poecilia_reticulata
ENSIPUG00000022943	RBM4B	97	65.192	ENSPNYG00000018564	rbm4.3	96	65.192	Pundamilia_nyererei
ENSIPUG00000022943	RBM4B	100	67.330	ENSPNYG00000018541	rbm4.3	100	67.045	Pundamilia_nyererei
ENSIPUG00000022943	RBM4B	100	80.618	ENSPNAG00000013053	rbm4.3	97	78.261	Pygocentrus_nattereri
ENSIPUG00000022943	RBM4B	100	68.785	ENSSFOG00015015563	rbm4.3	100	68.785	Scleropages_formosus
ENSIPUG00000022943	RBM4B	97	65.588	ENSSMAG00000013653	rbm4.3	96	63.235	Scophthalmus_maximus
ENSIPUG00000022943	RBM4B	97	68.824	ENSSMAG00000013644	rbm4.3	100	67.806	Scophthalmus_maximus
ENSIPUG00000022943	RBM4B	100	69.516	ENSSDUG00000018435	rbm4.3	100	69.231	Seriola_dumerili
ENSIPUG00000022943	RBM4B	99	64.773	ENSSDUG00000018422	rbm4.3	99	64.773	Seriola_dumerili
ENSIPUG00000022943	RBM4B	99	63.920	ENSSLDG00000017182	rbm4.3	99	64.205	Seriola_lalandi_dorsalis
ENSIPUG00000022943	RBM4B	100	69.516	ENSSLDG00000017204	rbm4.3	100	69.231	Seriola_lalandi_dorsalis
ENSIPUG00000022943	RBM4B	99	64.957	ENSSPAG00000008041	rbm4.3	85	66.571	Stegastes_partitus
ENSIPUG00000022943	RBM4B	100	67.806	ENSSPAG00000008062	rbm4.3	97	69.027	Stegastes_partitus
ENSIPUG00000022943	RBM4B	100	68.555	ENSTRUG00000020901	rbm4.3	100	67.705	Takifugu_rubripes
ENSIPUG00000022943	RBM4B	97	62.242	ENSTRUG00000023874	rbm4.3	96	62.974	Takifugu_rubripes
ENSIPUG00000022943	RBM4B	100	66.382	ENSTNIG00000005668	rbm4.3	100	65.812	Tetraodon_nigroviridis
ENSIPUG00000022943	RBM4B	100	63.202	ENSXCOG00000006001	rbm4.3	100	63.202	Xiphophorus_couchianus
ENSIPUG00000022943	RBM4B	97	61.516	ENSXCOG00000005996	rbm4.3	97	62.500	Xiphophorus_couchianus
ENSIPUG00000022943	RBM4B	100	63.483	ENSXMAG00000011698	rbm4.3	100	62.921	Xiphophorus_maculatus
ENSIPUG00000022943	RBM4B	100	63.764	ENSXMAG00000021997	rbm4.3	100	63.202	Xiphophorus_maculatus
ENSIPUG00000022943	RBM4B	98	61.714	ENSXMAG00000025173	rbm4.3	99	62.323	Xiphophorus_maculatus