EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000023232 (Gene tree)
Gene ID: 108260527
Gene Symbol: arl5c
Alias: zgc:77751
Full Name: ADP-ribosylation factor-like protein 5B
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 6237 bases
Position: chr2:6875129-6881365
Accession: 108260527
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000034589	MMR_HSR1	PF01926.23	9.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000035948	-	3152	XM_017460916	ENSIPUP00000034589	179 (aa)	XP_017316405	A0A2D0QG90

Gene Model

Click here to download ENSIPUG00000023232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000023232's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000023232	arl5c	97	36.932	ENSIPUG00000019792	arl3l1	94	36.932
ENSIPUG00000023232	arl5c	85	39.873	ENSIPUG00000019342	Arl4d	79	39.873
ENSIPUG00000023232	arl5c	89	43.030	ENSIPUG00000024159	arl4a	83	43.030
ENSIPUG00000023232	arl5c	92	41.818	ENSIPUG00000020344	-	100	41.818
ENSIPUG00000023232	arl5c	94	46.471	ENSIPUG00000013834	arl1	91	46.471
ENSIPUG00000023232	arl5c	98	46.893	ENSIPUG00000004159	Arf5	98	46.893
ENSIPUG00000023232	arl5c	99	37.640	ENSIPUG00000003931	arl2	97	37.640
ENSIPUG00000023232	arl5c	77	31.293	ENSIPUG00000017684	rab33b	60	31.293
ENSIPUG00000023232	arl5c	99	40.556	ENSIPUG00000015451	arl3	98	40.556
ENSIPUG00000023232	arl5c	98	48.588	ENSIPUG00000000108	Arf2	98	48.588
ENSIPUG00000023232	arl5c	98	49.718	ENSIPUG00000011737	arf1	98	49.718
ENSIPUG00000023232	arl5c	94	39.665	ENSIPUG00000024487	arfrp1	89	39.665
ENSIPUG00000023232	arl5c	69	30.534	ENSIPUG00000010794	rab22a	64	30.534
ENSIPUG00000023232	arl5c	64	33.058	ENSIPUG00000024622	rab35	59	33.058
ENSIPUG00000023232	arl5c	92	40.361	ENSIPUG00000020426	arl11	92	40.361
ENSIPUG00000023232	arl5c	98	70.455	ENSIPUG00000021388	arl5a	98	72.393
ENSIPUG00000023232	arl5c	98	44.068	ENSIPUG00000006913	-	69	44.068
ENSIPUG00000023232	arl5c	98	48.588	ENSIPUG00000023431	arf3b	98	48.588
ENSIPUG00000023232	arl5c	98	49.432	ENSIPUG00000006311	arf1	98	49.432
ENSIPUG00000023232	arl5c	57	31.731	ENSIPUG00000010046	sar1b	74	31.731
ENSIPUG00000023232	arl5c	85	45.570	ENSIPUG00000006298	-	82	45.570
ENSIPUG00000023232	arl5c	98	49.432	ENSIPUG00000007829	arf3a	98	49.432
ENSIPUG00000023232	arl5c	85	42.767	ENSIPUG00000021618	arl4ab	82	42.767
ENSIPUG00000023232	arl5c	96	33.898	ENSIPUG00000024239	ARL6	91	33.898
ENSIPUG00000023232	arl5c	89	41.818	ENSIPUG00000002122	arl4cb	86	41.818
ENSIPUG00000023232	arl5c	98	45.763	ENSIPUG00000004215	arf5	98	45.763
ENSIPUG00000023232	arl5c	98	46.893	ENSIPUG00000007016	arf4	98	46.893
ENSIPUG00000023232	arl5c	64	33.058	ENSIPUG00000011489	Rab35	59	33.058
ENSIPUG00000023232	arl5c	98	72.571	ENSIPUG00000006168	arl5b	100	73.780
ENSIPUG00000023232	arl5c	57	30.769	ENSIPUG00000024669	SAR1B	79	30.769
ENSIPUG00000023232	arl5c	99	40.556	ENSIPUG00000008227	arl3	98	40.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000023232	arl5c	100	79.888	ENSAPOG00000005821	arl5c	100	79.888	Acanthochromis_polyacanthus
ENSIPUG00000023232	arl5c	99	82.123	ENSACIG00000008975	arl5c	99	82.123	Amphilophus_citrinellus
ENSIPUG00000023232	arl5c	100	81.564	ENSAOCG00000010448	arl5c	100	81.564	Amphiprion_ocellaris
ENSIPUG00000023232	arl5c	100	81.564	ENSAPEG00000002699	arl5c	100	81.564	Amphiprion_percula
ENSIPUG00000023232	arl5c	100	79.888	ENSATEG00000000181	arl5c	100	79.888	Anabas_testudineus
ENSIPUG00000023232	arl5c	100	84.916	ENSACLG00000000922	arl5c	100	84.916	Astatotilapia_calliptera
ENSIPUG00000023232	arl5c	100	92.737	ENSAMXG00000031771	arl5c	100	92.737	Astyanax_mexicanus
ENSIPUG00000023232	arl5c	100	79.330	ENSCSEG00000009845	arl5c	100	79.330	Cynoglossus_semilaevis
ENSIPUG00000023232	arl5c	100	82.123	ENSCVAG00000012706	arl5c	100	82.123	Cyprinodon_variegatus
ENSIPUG00000023232	arl5c	100	89.385	ENSDARG00000035719	arl5c	100	89.385	Danio_rerio
ENSIPUG00000023232	arl5c	100	89.944	ENSELUG00000016864	arl5c	100	89.944	Esox_lucius
ENSIPUG00000023232	arl5c	100	82.682	ENSFHEG00000013677	arl5c	100	82.682	Fundulus_heteroclitus
ENSIPUG00000023232	arl5c	100	82.682	ENSGAFG00000002547	arl5c	100	82.682	Gambusia_affinis
ENSIPUG00000023232	arl5c	100	84.916	ENSGACG00000009321	arl5c	100	84.916	Gasterosteus_aculeatus
ENSIPUG00000023232	arl5c	100	84.916	ENSHBUG00000007301	arl5c	100	84.916	Haplochromis_burtoni
ENSIPUG00000023232	arl5c	100	76.536	ENSHCOG00000017576	-	100	76.536	Hippocampus_comes
ENSIPUG00000023232	arl5c	100	82.682	ENSKMAG00000011323	arl5c	100	82.682	Kryptolebias_marmoratus
ENSIPUG00000023232	arl5c	100	81.006	ENSLBEG00000006177	arl5c	86	81.006	Labrus_bergylta
ENSIPUG00000023232	arl5c	100	83.240	ENSMAMG00000022157	arl5c	100	83.240	Mastacembelus_armatus
ENSIPUG00000023232	arl5c	100	84.916	ENSMZEG00005022925	arl5c	100	84.916	Maylandia_zebra
ENSIPUG00000023232	arl5c	92	87.195	ENSMMOG00000020851	arl5c	96	87.195	Mola_mola
ENSIPUG00000023232	arl5c	99	80.337	ENSMALG00000009306	arl5c	99	80.337	Monopterus_albus
ENSIPUG00000023232	arl5c	100	84.916	ENSNBRG00000020245	arl5c	100	84.916	Neolamprologus_brichardi
ENSIPUG00000023232	arl5c	100	84.358	ENSONIG00000000890	arl5c	99	84.358	Oreochromis_niloticus
ENSIPUG00000023232	arl5c	100	77.095	ENSORLG00000002960	arl5c	100	78.049	Oryzias_latipes
ENSIPUG00000023232	arl5c	100	77.095	ENSORLG00020010074	arl5c	100	78.049	Oryzias_latipes_hni
ENSIPUG00000023232	arl5c	100	77.095	ENSORLG00015002752	arl5c	100	78.049	Oryzias_latipes_hsok
ENSIPUG00000023232	arl5c	97	79.191	ENSOMEG00000021718	arl5c	98	79.191	Oryzias_melastigma
ENSIPUG00000023232	arl5c	100	88.268	ENSPKIG00000021727	arl5c	100	88.268	Paramormyrops_kingsleyae
ENSIPUG00000023232	arl5c	100	83.799	ENSPFOG00000007842	arl5c	99	83.799	Poecilia_formosa
ENSIPUG00000023232	arl5c	100	83.240	ENSPLAG00000002394	arl5c	100	83.240	Poecilia_latipinna
ENSIPUG00000023232	arl5c	94	84.024	ENSPMEG00000000631	arl5c	98	84.024	Poecilia_mexicana
ENSIPUG00000023232	arl5c	100	84.358	ENSPREG00000008730	arl5c	100	84.358	Poecilia_reticulata
ENSIPUG00000023232	arl5c	100	84.916	ENSPNYG00000012720	arl5c	100	84.916	Pundamilia_nyererei
ENSIPUG00000023232	arl5c	100	92.737	ENSPNAG00000002310	arl5c	100	92.737	Pygocentrus_nattereri
ENSIPUG00000023232	arl5c	100	87.709	ENSSFOG00015023529	arl5c	100	87.709	Scleropages_formosus
ENSIPUG00000023232	arl5c	100	83.240	ENSSMAG00000010552	arl5c	100	83.240	Scophthalmus_maximus
ENSIPUG00000023232	arl5c	100	82.123	ENSSDUG00000022640	arl5c	100	82.123	Seriola_dumerili
ENSIPUG00000023232	arl5c	100	82.123	ENSSLDG00000000728	arl5c	100	82.123	Seriola_lalandi_dorsalis
ENSIPUG00000023232	arl5c	100	81.006	ENSSPAG00000007687	arl5c	100	81.006	Stegastes_partitus
ENSIPUG00000023232	arl5c	100	83.799	ENSTRUG00000022814	arl5c	100	83.799	Takifugu_rubripes
ENSIPUG00000023232	arl5c	100	80.447	ENSTNIG00000003015	arl5c	99	80.447	Tetraodon_nigroviridis
ENSIPUG00000023232	arl5c	100	82.682	ENSXCOG00000017380	arl5c	100	82.682	Xiphophorus_couchianus
ENSIPUG00000023232	arl5c	100	82.123	ENSXMAG00000008447	arl5c	100	82.123	Xiphophorus_maculatus