EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000023360 (Gene tree)
Gene ID: 108271126
Gene Symbol: EFTUD1
Alias: eftud1
Full Name: elongation factor like GTPase 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 156744 bases
Position: chr10:10610960-10767703
Accession: 108271126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000034781	GTP_EFTU	PF00009.27	2.1e-61	1	1
ENSIPUP00000034773	GTP_EFTU	PF00009.27	2.4e-61	1	1
ENSIPUP00000034795	GTP_EFTU	PF00009.27	4.7e-40	1	1
ENSIPUP00000034795	GTP_EFTU_D2	PF03144.25	5.6e-09	1	1
ENSIPUP00000034781	GTP_EFTU_D2	PF03144.25	1.4e-08	1	1
ENSIPUP00000034773	GTP_EFTU_D2	PF03144.25	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000036149	-	5555	XM_017478429	ENSIPUP00000034781	1105 (aa)	XP_017333918	W5UBP8
ENSIPUT00000036141	-	3617	-	ENSIPUP00000034773	1144 (aa)	-	-
ENSIPUT00000036162	-	3093	-	ENSIPUP00000034795	1030 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000023360's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000023360's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000023360	EFTUD1	92	36.203	ENSIPUG00000007921	eef2l2	96	36.203
ENSIPUG00000023360	EFTUD1	92	36.564	ENSIPUG00000000950	-	98	36.564
ENSIPUG00000023360	EFTUD1	96	30.166	ENSIPUG00000023182	Eftud2	85	30.166

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000023360	EFTUD1	99	67.968	ENSG00000140598	EFL1	96	78.028	Homo_sapiens
ENSIPUG00000023360	EFTUD1	100	74.780	ENSAPOG00000000188	efl1	100	74.956	Acanthochromis_polyacanthus
ENSIPUG00000023360	EFTUD1	99	68.379	ENSAMEG00000006031	EFL1	99	68.379	Ailuropoda_melanoleuca
ENSIPUG00000023360	EFTUD1	100	75.403	ENSACIG00000017802	efl1	100	75.714	Amphilophus_citrinellus
ENSIPUG00000023360	EFTUD1	100	73.952	ENSAOCG00000023933	efl1	100	74.130	Amphiprion_ocellaris
ENSIPUG00000023360	EFTUD1	100	74.316	ENSAPEG00000000262	efl1	100	74.492	Amphiprion_percula
ENSIPUG00000023360	EFTUD1	100	74.425	ENSATEG00000012373	efl1	100	74.425	Anabas_testudineus
ENSIPUG00000023360	EFTUD1	99	70.599	ENSAPLG00000011147	EFL1	99	70.599	Anas_platyrhynchos
ENSIPUG00000023360	EFTUD1	99	69.183	ENSACAG00000011040	EFL1	99	69.183	Anolis_carolinensis
ENSIPUG00000023360	EFTUD1	99	68.510	ENSANAG00000027459	EFL1	99	68.510	Aotus_nancymaae
ENSIPUG00000023360	EFTUD1	100	75.536	ENSACLG00000025780	efl1	100	75.536	Astatotilapia_calliptera
ENSIPUG00000023360	EFTUD1	100	80.719	ENSAMXG00000019529	efl1	100	81.157	Astyanax_mexicanus
ENSIPUG00000023360	EFTUD1	99	68.728	ENSBTAG00000003410	EFL1	99	68.728	Bos_taurus
ENSIPUG00000023360	EFTUD1	93	38.771	WBGene00010732	K10C3.5	93	53.153	Caenorhabditis_elegans
ENSIPUG00000023360	EFTUD1	85	89.683	ENSCJAG00000015607	-	93	89.683	Callithrix_jacchus
ENSIPUG00000023360	EFTUD1	99	67.936	ENSCAFG00000013671	EFL1	99	67.936	Canis_familiaris
ENSIPUG00000023360	EFTUD1	99	68.607	ENSCHIG00000001883	EFL1	99	68.607	Capra_hircus
ENSIPUG00000023360	EFTUD1	99	69.045	ENSTSYG00000000348	EFL1	100	68.950	Carlito_syrichta
ENSIPUG00000023360	EFTUD1	99	57.797	ENSCAPG00000017944	EFL1	99	57.797	Cavia_aperea
ENSIPUG00000023360	EFTUD1	99	67.965	ENSCPOG00000001924	EFL1	99	67.965	Cavia_porcellus
ENSIPUG00000023360	EFTUD1	99	68.956	ENSCCAG00000034450	EFL1	99	68.956	Cebus_capucinus
ENSIPUG00000023360	EFTUD1	99	68.243	ENSCATG00000031678	-	99	68.243	Cercocebus_atys
ENSIPUG00000023360	EFTUD1	99	68.262	ENSCLAG00000010155	EFL1	86	81.928	Chinchilla_lanigera
ENSIPUG00000023360	EFTUD1	99	67.702	ENSCSAG00000015165	EFL1	99	67.702	Chlorocebus_sabaeus
ENSIPUG00000023360	EFTUD1	78	65.363	ENSCHOG00000014029	EFL1	78	65.363	Choloepus_hoffmanni
ENSIPUG00000023360	EFTUD1	99	70.815	ENSCPBG00000017638	EFL1	99	70.815	Chrysemys_picta_bellii
ENSIPUG00000023360	EFTUD1	99	61.098	ENSCSAVG00000001787	-	100	56.429	Ciona_savignyi
ENSIPUG00000023360	EFTUD1	99	67.791	ENSCANG00000038093	EFL1	99	67.791	Colobus_angolensis_palliatus
ENSIPUG00000023360	EFTUD1	99	64.991	ENSCGRG00001010826	Efl1	99	64.991	Cricetulus_griseus_chok1gshd
ENSIPUG00000023360	EFTUD1	99	67.637	ENSCGRG00000003273	Efl1	99	67.637	Cricetulus_griseus_crigri
ENSIPUG00000023360	EFTUD1	99	71.761	ENSCSEG00000005856	efl1	99	71.850	Cynoglossus_semilaevis
ENSIPUG00000023360	EFTUD1	97	71.053	ENSCVAG00000011863	efl1	95	71.053	Cyprinodon_variegatus
ENSIPUG00000023360	EFTUD1	100	79.535	ENSDARG00000079672	efl1	98	79.535	Danio_rerio
ENSIPUG00000023360	EFTUD1	99	67.489	ENSDNOG00000006097	EFL1	99	67.489	Dasypus_novemcinctus
ENSIPUG00000023360	EFTUD1	99	67.782	ENSDORG00000000719	Efl1	99	67.782	Dipodomys_ordii
ENSIPUG00000023360	EFTUD1	99	45.897	FBgn0053158	CG33158	99	45.897	Drosophila_melanogaster
ENSIPUG00000023360	EFTUD1	93	66.520	ENSETEG00000004309	EFL1	95	66.520	Echinops_telfairi
ENSIPUG00000023360	EFTUD1	84	69.838	ENSEBUG00000010738	efl1	100	69.838	Eptatretus_burgeri
ENSIPUG00000023360	EFTUD1	99	69.581	ENSEASG00005007108	EFL1	99	69.581	Equus_asinus_asinus
ENSIPUG00000023360	EFTUD1	99	67.326	ENSECAG00000016354	EFL1	99	69.216	Equus_caballus
ENSIPUG00000023360	EFTUD1	74	72.779	ENSEEUG00000006326	EFL1	78	72.779	Erinaceus_europaeus
ENSIPUG00000023360	EFTUD1	100	70.244	ENSELUG00000002520	efl1	99	79.661	Esox_lucius
ENSIPUG00000023360	EFTUD1	99	69.484	ENSFCAG00000007741	EFL1	99	69.484	Felis_catus
ENSIPUG00000023360	EFTUD1	99	71.316	ENSFALG00000011103	EFL1	99	71.316	Ficedula_albicollis
ENSIPUG00000023360	EFTUD1	99	68.170	ENSFDAG00000009023	EFL1	99	68.170	Fukomys_damarensis
ENSIPUG00000023360	EFTUD1	100	72.670	ENSFHEG00000017795	efl1	100	72.670	Fundulus_heteroclitus
ENSIPUG00000023360	EFTUD1	99	71.635	ENSGMOG00000005041	efl1	100	71.635	Gadus_morhua
ENSIPUG00000023360	EFTUD1	99	70.604	ENSGALG00000006225	EFL1	99	70.604	Gallus_gallus
ENSIPUG00000023360	EFTUD1	100	71.720	ENSGACG00000012495	efl1	100	71.631	Gasterosteus_aculeatus
ENSIPUG00000023360	EFTUD1	99	71.466	ENSGAGG00000022841	EFL1	99	71.466	Gopherus_agassizii
ENSIPUG00000023360	EFTUD1	97	63.861	ENSGGOG00000005017	EFL1	100	63.861	Gorilla_gorilla
ENSIPUG00000023360	EFTUD1	100	75.356	ENSHBUG00000022667	efl1	100	75.356	Haplochromis_burtoni
ENSIPUG00000023360	EFTUD1	99	64.748	ENSHGLG00000011798	EFL1	99	65.190	Heterocephalus_glaber_female
ENSIPUG00000023360	EFTUD1	99	67.316	ENSHGLG00100010319	EFTUD1	95	83.544	Heterocephalus_glaber_male
ENSIPUG00000023360	EFTUD1	100	73.132	ENSHCOG00000007325	efl1	100	73.132	Hippocampus_comes
ENSIPUG00000023360	EFTUD1	99	65.252	ENSSTOG00000022945	EFL1	99	65.252	Ictidomys_tridecemlineatus
ENSIPUG00000023360	EFTUD1	99	67.756	ENSJJAG00000018598	Efl1	99	67.756	Jaculus_jaculus
ENSIPUG00000023360	EFTUD1	100	73.694	ENSLBEG00000015269	efl1	100	73.782	Labrus_bergylta
ENSIPUG00000023360	EFTUD1	100	71.804	ENSLACG00000016121	EFL1	100	71.804	Latimeria_chalumnae
ENSIPUG00000023360	EFTUD1	100	75.332	ENSLOCG00000012862	efl1	99	75.685	Lepisosteus_oculatus
ENSIPUG00000023360	EFTUD1	99	67.469	ENSLAFG00000012504	EFL1	99	67.469	Loxodonta_africana
ENSIPUG00000023360	EFTUD1	99	67.702	ENSMFAG00000032657	-	99	67.702	Macaca_fascicularis
ENSIPUG00000023360	EFTUD1	99	67.009	ENSMMUG00000023353	EFL1	99	67.009	Macaca_mulatta
ENSIPUG00000023360	EFTUD1	99	67.613	ENSMNEG00000041671	-	99	67.613	Macaca_nemestrina
ENSIPUG00000023360	EFTUD1	99	67.968	ENSMLEG00000033735	EFL1	99	67.968	Mandrillus_leucophaeus
ENSIPUG00000023360	EFTUD1	100	75.223	ENSMAMG00000011336	efl1	100	75.312	Mastacembelus_armatus
ENSIPUG00000023360	EFTUD1	100	75.445	ENSMZEG00005003012	efl1	100	75.445	Maylandia_zebra
ENSIPUG00000023360	EFTUD1	99	70.800	ENSMGAG00000007991	EFL1	99	70.800	Meleagris_gallopavo
ENSIPUG00000023360	EFTUD1	99	68.113	ENSMAUG00000010709	Efl1	99	68.113	Mesocricetus_auratus
ENSIPUG00000023360	EFTUD1	99	68.282	ENSMICG00000027853	EFL1	94	75.443	Microcebus_murinus
ENSIPUG00000023360	EFTUD1	99	67.702	ENSMOCG00000007470	Efl1	99	67.702	Microtus_ochrogaster
ENSIPUG00000023360	EFTUD1	100	72.538	ENSMMOG00000015370	efl1	100	72.538	Mola_mola
ENSIPUG00000023360	EFTUD1	100	68.018	ENSMODG00000019386	EFL1	100	68.018	Monodelphis_domestica
ENSIPUG00000023360	EFTUD1	100	73.573	ENSMALG00000018810	efl1	100	73.573	Monopterus_albus
ENSIPUG00000023360	EFTUD1	99	67.725	MGP_CAROLIEiJ_G0029936	Efl1	98	78.423	Mus_caroli
ENSIPUG00000023360	EFTUD1	99	67.725	ENSMUSG00000038563	Efl1	99	78.448	Mus_musculus
ENSIPUG00000023360	EFTUD1	99	67.549	MGP_PahariEiJ_G0013157	Efl1	99	78.017	Mus_pahari
ENSIPUG00000023360	EFTUD1	99	74.444	MGP_SPRETEiJ_G0031038	Efl1	99	74.444	Mus_spretus
ENSIPUG00000023360	EFTUD1	99	67.139	ENSMPUG00000015494	EFL1	99	67.493	Mustela_putorius_furo
ENSIPUG00000023360	EFTUD1	99	67.779	ENSNGAG00000017740	Efl1	99	67.779	Nannospalax_galili
ENSIPUG00000023360	EFTUD1	97	66.827	ENSNLEG00000010679	EFL1	99	66.827	Nomascus_leucogenys
ENSIPUG00000023360	EFTUD1	62	75.472	ENSMEUG00000012049	-	69	75.472	Notamacropus_eugenii
ENSIPUG00000023360	EFTUD1	57	91.935	ENSOPRG00000012488	-	57	91.935	Ochotona_princeps
ENSIPUG00000023360	EFTUD1	99	67.794	ENSODEG00000016193	EFL1	86	81.250	Octodon_degus
ENSIPUG00000023360	EFTUD1	100	74.757	ENSONIG00000003394	efl1	100	74.934	Oreochromis_niloticus
ENSIPUG00000023360	EFTUD1	99	68.683	ENSOCUG00000012163	EFL1	99	68.683	Oryctolagus_cuniculus
ENSIPUG00000023360	EFTUD1	64	66.427	ENSORLG00000020390	efl1	100	67.244	Oryzias_latipes
ENSIPUG00000023360	EFTUD1	95	79.915	ENSORLG00015012031	efl1	95	79.915	Oryzias_latipes_hsok
ENSIPUG00000023360	EFTUD1	100	73.466	ENSOMEG00000022784	efl1	100	73.375	Oryzias_melastigma
ENSIPUG00000023360	EFTUD1	99	68.667	ENSOARG00000014452	EFL1	99	68.667	Ovis_aries
ENSIPUG00000023360	EFTUD1	99	63.177	ENSPPAG00000039672	EFL1	99	63.177	Pan_paniscus
ENSIPUG00000023360	EFTUD1	99	69.670	ENSPPRG00000002193	EFL1	99	69.670	Panthera_pardus
ENSIPUG00000023360	EFTUD1	99	69.402	ENSPTIG00000007053	EFL1	99	69.492	Panthera_tigris_altaica
ENSIPUG00000023360	EFTUD1	99	68.243	ENSPTRG00000007374	EFL1	99	68.243	Pan_troglodytes
ENSIPUG00000023360	EFTUD1	99	67.613	ENSPANG00000015635	-	99	66.916	Papio_anubis
ENSIPUG00000023360	EFTUD1	99	74.391	ENSPKIG00000018456	efl1	99	74.505	Paramormyrops_kingsleyae
ENSIPUG00000023360	EFTUD1	99	71.304	ENSPSIG00000007790	EFL1	99	71.304	Pelodiscus_sinensis
ENSIPUG00000023360	EFTUD1	97	62.056	ENSPMAG00000002026	efl1	100	62.150	Petromyzon_marinus
ENSIPUG00000023360	EFTUD1	100	67.606	ENSPCIG00000004372	EFL1	100	67.606	Phascolarctos_cinereus
ENSIPUG00000023360	EFTUD1	100	71.174	ENSPFOG00000018687	efl1	100	71.263	Poecilia_formosa
ENSIPUG00000023360	EFTUD1	100	71.263	ENSPLAG00000001988	efl1	100	71.352	Poecilia_latipinna
ENSIPUG00000023360	EFTUD1	100	71.224	ENSPMEG00000000402	efl1	100	71.314	Poecilia_mexicana
ENSIPUG00000023360	EFTUD1	100	71.986	ENSPREG00000022085	efl1	100	72.074	Poecilia_reticulata
ENSIPUG00000023360	EFTUD1	99	67.968	ENSPPYG00000006724	EFL1	99	67.968	Pongo_abelii
ENSIPUG00000023360	EFTUD1	99	68.421	ENSPVAG00000003189	EFL1	99	68.421	Pteropus_vampyrus
ENSIPUG00000023360	EFTUD1	100	67.975	ENSPNYG00000019406	efl1	100	68.243	Pundamilia_nyererei
ENSIPUG00000023360	EFTUD1	100	82.451	ENSPNAG00000012104	efl1	100	82.451	Pygocentrus_nattereri
ENSIPUG00000023360	EFTUD1	99	67.958	ENSRNOG00000032723	Efl1	99	67.958	Rattus_norvegicus
ENSIPUG00000023360	EFTUD1	99	67.613	ENSRBIG00000040576	EFL1	99	67.613	Rhinopithecus_bieti
ENSIPUG00000023360	EFTUD1	100	66.308	ENSRROG00000031475	EFL1	100	66.308	Rhinopithecus_roxellana
ENSIPUG00000023360	EFTUD1	98	46.784	YNL163C	RIA1	93	46.784	Saccharomyces_cerevisiae
ENSIPUG00000023360	EFTUD1	99	68.510	ENSSBOG00000018280	EFL1	99	68.510	Saimiri_boliviensis_boliviensis
ENSIPUG00000023360	EFTUD1	100	65.026	ENSSHAG00000018863	EFL1	100	65.026	Sarcophilus_harrisii
ENSIPUG00000023360	EFTUD1	100	75.565	ENSSFOG00015016244	efl1	100	75.565	Scleropages_formosus
ENSIPUG00000023360	EFTUD1	100	73.286	ENSSMAG00000016928	efl1	100	73.375	Scophthalmus_maximus
ENSIPUG00000023360	EFTUD1	100	75.199	ENSSDUG00000013271	efl1	100	75.332	Seriola_dumerili
ENSIPUG00000023360	EFTUD1	100	75.332	ENSSLDG00000014655	efl1	100	75.376	Seriola_lalandi_dorsalis
ENSIPUG00000023360	EFTUD1	100	70.706	ENSSPUG00000000941	EFL1	100	70.706	Sphenodon_punctatus
ENSIPUG00000023360	EFTUD1	100	75.177	ENSSPAG00000011885	efl1	100	75.355	Stegastes_partitus
ENSIPUG00000023360	EFTUD1	99	68.645	ENSSSCG00000001792	EFL1	99	68.645	Sus_scrofa
ENSIPUG00000023360	EFTUD1	99	71.745	ENSTGUG00000007850	EFL1	99	71.745	Taeniopygia_guttata
ENSIPUG00000023360	EFTUD1	100	65.691	ENSTNIG00000003399	efl1	100	65.691	Tetraodon_nigroviridis
ENSIPUG00000023360	EFTUD1	78	79.375	ENSTBEG00000011804	EFL1	77	79.375	Tupaia_belangeri
ENSIPUG00000023360	EFTUD1	99	67.553	ENSTTRG00000011243	EFL1	99	67.553	Tursiops_truncatus
ENSIPUG00000023360	EFTUD1	99	68.113	ENSUAMG00000022106	EFL1	99	68.113	Ursus_americanus
ENSIPUG00000023360	EFTUD1	99	68.379	ENSUMAG00000010303	EFL1	99	68.379	Ursus_maritimus
ENSIPUG00000023360	EFTUD1	89	81.250	ENSVPAG00000005735	EFL1	89	81.250	Vicugna_pacos
ENSIPUG00000023360	EFTUD1	99	67.936	ENSVVUG00000004967	EFL1	99	67.936	Vulpes_vulpes
ENSIPUG00000023360	EFTUD1	100	71.820	ENSXETG00000015701	EFL1	100	71.820	Xenopus_tropicalis
ENSIPUG00000023360	EFTUD1	100	72.079	ENSXMAG00000023705	efl1	100	72.079	Xiphophorus_maculatus