EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000023423 (Gene tree)
Gene ID: 108263729
Gene Symbol: ddx43
Alias: zgc:174910
Full Name: DEAD-box helicase 43
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 18042 bases
Position: chr3:15655085-15673126
Accession: 108263729
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000034861	KH_1	PF00013.29	2.2e-13	1	1
ENSIPUP00000034869	KH_1	PF00013.29	2.2e-13	1	1
ENSIPUP00000034869	DEAD	PF00270.29	7.8e-42	1	1
ENSIPUP00000034861	DEAD	PF00270.29	8.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000036243	-	2161	XM_017464803	ENSIPUP00000034869	683 (aa)	XP_017320292	A0A2D0QP86
ENSIPUT00000036235	-	1965	-	ENSIPUP00000034861	654 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000023423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000023423's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000023423	ddx43	58	42.118	ENSIPUG00000009936	ddx3xb	62	42.118
ENSIPUG00000023423	ddx43	50	33.333	ENSIPUG00000012823	DDX6	70	33.333
ENSIPUG00000023423	ddx43	59	39.524	ENSIPUG00000001845	ddx4	69	39.524
ENSIPUG00000023423	ddx43	50	33.526	ENSIPUG00000008367	-	70	33.526
ENSIPUG00000023423	ddx43	65	45.638	ENSIPUG00000007815	ddx5	72	44.235
ENSIPUG00000023423	ddx43	59	34.135	ENSIPUG00000008623	ddx52	66	34.300
ENSIPUG00000023423	ddx43	56	33.846	ENSIPUG00000008100	Ddx59	61	33.846
ENSIPUG00000023423	ddx43	60	39.713	ENSIPUG00000018977	-	89	39.945
ENSIPUG00000023423	ddx43	51	33.333	ENSIPUG00000009463	EIF4A2	83	33.333
ENSIPUG00000023423	ddx43	51	32.955	ENSIPUG00000021785	eif4a3	85	32.955
ENSIPUG00000023423	ddx43	50	30.084	ENSIPUG00000014551	ddx55	59	30.362
ENSIPUG00000023423	ddx43	50	34.006	ENSIPUG00000005117	if4a1	84	34.006
ENSIPUG00000023423	ddx43	50	33.913	ENSIPUG00000012038	eif4a2	84	33.621
ENSIPUG00000023423	ddx43	52	30.376	ENSIPUG00000023912	ddx19	80	30.376
ENSIPUG00000023423	ddx43	59	35.831	ENSIPUG00000023788	ddx47	88	35.831
ENSIPUG00000023423	ddx43	51	33.056	ENSIPUG00000005386	ddx49	73	33.056
ENSIPUG00000023423	ddx43	52	30.000	ENSIPUG00000022795	zgc:193690	75	30.000
ENSIPUG00000023423	ddx43	51	33.248	ENSIPUG00000020592	ddx31	55	32.170
ENSIPUG00000023423	ddx43	54	31.649	ENSIPUG00000021552	ddx39aa	86	31.649
ENSIPUG00000023423	ddx43	63	44.851	ENSIPUG00000014448	ddx5	78	45.355
ENSIPUG00000023423	ddx43	68	38.758	ENSIPUG00000013327	ddx42	51	38.758
ENSIPUG00000023423	ddx43	59	41.686	ENSIPUG00000005247	DDX23	53	41.686
ENSIPUG00000023423	ddx43	65	42.857	ENSIPUG00000015768	si:dkey-156n14.5	92	44.032
ENSIPUG00000023423	ddx43	56	39.899	ENSIPUG00000016171	ddx41	64	39.899
ENSIPUG00000023423	ddx43	62	39.374	ENSIPUG00000023024	ddx3xa	61	39.679
ENSIPUG00000023423	ddx43	54	30.000	ENSIPUG00000000616	ddx6	79	32.292
ENSIPUG00000023423	ddx43	54	31.383	ENSIPUG00000021341	DDX39A	86	31.383

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000023423	ddx43	96	67.500	ENSAPOG00000001712	ddx43	96	66.667	Acanthochromis_polyacanthus
ENSIPUG00000023423	ddx43	96	59.581	ENSACIG00000012170	ddx43	98	58.285	Amphilophus_citrinellus
ENSIPUG00000023423	ddx43	96	70.420	ENSAOCG00000001331	ddx43	95	69.287	Amphiprion_ocellaris
ENSIPUG00000023423	ddx43	96	70.060	ENSAPEG00000001133	ddx43	94	69.231	Amphiprion_percula
ENSIPUG00000023423	ddx43	96	70.015	ENSATEG00000012664	ddx43	98	68.293	Anabas_testudineus
ENSIPUG00000023423	ddx43	81	67.025	ENSAPLG00000010182	-	96	73.866	Anas_platyrhynchos
ENSIPUG00000023423	ddx43	85	67.241	ENSACAG00000004387	-	99	61.550	Anolis_carolinensis
ENSIPUG00000023423	ddx43	96	70.597	ENSACLG00000026081	ddx43	99	68.421	Astatotilapia_calliptera
ENSIPUG00000023423	ddx43	97	75.036	ENSAMXG00000004457	ddx43	96	75.966	Astyanax_mexicanus
ENSIPUG00000023423	ddx43	70	46.012	WBGene00013214	Y54G11A.3	94	46.012	Caenorhabditis_elegans
ENSIPUG00000023423	ddx43	61	56.341	ENSCSEG00000000532	ddx43	98	54.348	Cynoglossus_semilaevis
ENSIPUG00000023423	ddx43	92	60.952	ENSCVAG00000009980	ddx43	97	60.960	Cyprinodon_variegatus
ENSIPUG00000023423	ddx43	96	72.821	ENSDARG00000022614	ddx43	96	72.063	Danio_rerio
ENSIPUG00000023423	ddx43	90	49.530	FBgn0037549	CG7878	89	49.209	Drosophila_melanogaster
ENSIPUG00000023423	ddx43	69	48.950	ENSETEG00000014626	-	88	49.462	Echinops_telfairi
ENSIPUG00000023423	ddx43	96	69.428	ENSELUG00000012126	ddx43	100	68.254	Esox_lucius
ENSIPUG00000023423	ddx43	98	61.367	ENSFALG00000007042	-	99	61.481	Ficedula_albicollis
ENSIPUG00000023423	ddx43	75	74.809	ENSFHEG00000011226	ddx43	92	77.120	Fundulus_heteroclitus
ENSIPUG00000023423	ddx43	67	76.316	ENSGMOG00000004178	ddx43	96	77.778	Gadus_morhua
ENSIPUG00000023423	ddx43	64	75.115	ENSGALG00000015928	-	99	75.115	Gallus_gallus
ENSIPUG00000023423	ddx43	96	67.206	ENSGAFG00000012622	ddx43	100	66.335	Gambusia_affinis
ENSIPUG00000023423	ddx43	82	75.265	ENSGACG00000012072	ddx43	97	74.561	Gasterosteus_aculeatus
ENSIPUG00000023423	ddx43	98	57.329	ENSGAGG00000025230	-	99	56.604	Gopherus_agassizii
ENSIPUG00000023423	ddx43	96	70.060	ENSHBUG00000011653	ddx43	99	68.137	Haplochromis_burtoni
ENSIPUG00000023423	ddx43	96	64.392	ENSHCOG00000014704	ddx43	98	62.571	Hippocampus_comes
ENSIPUG00000023423	ddx43	96	68.398	ENSKMAG00000016167	ddx43	99	66.478	Kryptolebias_marmoratus
ENSIPUG00000023423	ddx43	96	69.288	ENSLBEG00000007913	ddx43	99	67.908	Labrus_bergylta
ENSIPUG00000023423	ddx43	71	69.121	ENSLACG00000000741	ddx43	100	68.789	Latimeria_chalumnae
ENSIPUG00000023423	ddx43	96	68.182	ENSLOCG00000016170	ddx43	100	66.423	Lepisosteus_oculatus
ENSIPUG00000023423	ddx43	96	64.881	ENSMAMG00000022128	ddx43	99	63.533	Mastacembelus_armatus
ENSIPUG00000023423	ddx43	96	70.597	ENSMZEG00005027349	ddx43	99	68.421	Maylandia_zebra
ENSIPUG00000023423	ddx43	84	66.782	ENSMGAG00000013832	-	98	66.378	Meleagris_gallopavo
ENSIPUG00000023423	ddx43	96	67.576	ENSMMOG00000007346	ddx43	98	65.936	Mola_mola
ENSIPUG00000023423	ddx43	83	55.830	ENSMODG00000014335	-	95	55.575	Monodelphis_domestica
ENSIPUG00000023423	ddx43	84	62.153	ENSMODG00000018546	-	88	62.069	Monodelphis_domestica
ENSIPUG00000023423	ddx43	96	68.529	ENSMALG00000020673	ddx43	98	66.902	Monopterus_albus
ENSIPUG00000023423	ddx43	96	69.288	ENSNBRG00000010942	ddx43	99	68.659	Neolamprologus_brichardi
ENSIPUG00000023423	ddx43	96	70.571	ENSONIG00000001195	ddx43	100	68.685	Oreochromis_niloticus
ENSIPUG00000023423	ddx43	55	67.914	ENSOANG00000006467	-	100	66.494	Ornithorhynchus_anatinus
ENSIPUG00000023423	ddx43	88	70.569	ENSORLG00000002267	ddx43	91	72.727	Oryzias_latipes
ENSIPUG00000023423	ddx43	88	70.407	ENSORLG00020018592	ddx43	91	72.804	Oryzias_latipes_hni
ENSIPUG00000023423	ddx43	88	70.292	ENSORLG00015004854	ddx43	92	72.362	Oryzias_latipes_hsok
ENSIPUG00000023423	ddx43	96	66.170	ENSOMEG00000023418	ddx43	93	70.915	Oryzias_melastigma
ENSIPUG00000023423	ddx43	96	68.732	ENSPKIG00000002941	ddx43	98	66.809	Paramormyrops_kingsleyae
ENSIPUG00000023423	ddx43	81	67.269	ENSPSIG00000002202	-	88	67.089	Pelodiscus_sinensis
ENSIPUG00000023423	ddx43	57	58.225	ENSPMGG00000019854	ddx43	91	58.140	Periophthalmus_magnuspinnatus
ENSIPUG00000023423	ddx43	83	53.901	ENSPCIG00000002492	-	90	53.628	Phascolarctos_cinereus
ENSIPUG00000023423	ddx43	62	71.698	ENSPCIG00000017981	-	96	71.698	Phascolarctos_cinereus
ENSIPUG00000023423	ddx43	96	68.101	ENSPFOG00000004241	ddx43	100	66.904	Poecilia_formosa
ENSIPUG00000023423	ddx43	96	68.249	ENSPLAG00000023362	ddx43	100	66.904	Poecilia_latipinna
ENSIPUG00000023423	ddx43	96	68.546	ENSPMEG00000004870	ddx43	100	67.190	Poecilia_mexicana
ENSIPUG00000023423	ddx43	96	60.688	ENSPREG00000000923	ddx43	100	60.116	Poecilia_reticulata
ENSIPUG00000023423	ddx43	96	65.408	ENSPNYG00000009064	ddx43	99	63.848	Pundamilia_nyererei
ENSIPUG00000023423	ddx43	97	79.880	ENSPNAG00000001232	ddx43	96	78.863	Pygocentrus_nattereri
ENSIPUG00000023423	ddx43	83	58.481	ENSSHAG00000016933	-	97	58.042	Sarcophilus_harrisii
ENSIPUG00000023423	ddx43	84	61.979	ENSSHAG00000001847	-	89	61.979	Sarcophilus_harrisii
ENSIPUG00000023423	ddx43	81	72.595	ENSSFOG00015012193	ddx43	86	72.595	Scleropages_formosus
ENSIPUG00000023423	ddx43	96	68.633	ENSSMAG00000019288	ddx43	98	67.500	Scophthalmus_maximus
ENSIPUG00000023423	ddx43	96	70.519	ENSSDUG00000020120	ddx43	98	69.385	Seriola_dumerili
ENSIPUG00000023423	ddx43	96	68.358	ENSSLDG00000017225	ddx43	95	67.977	Seriola_lalandi_dorsalis
ENSIPUG00000023423	ddx43	69	63.559	ENSSPUG00000018097	-	96	63.889	Sphenodon_punctatus
ENSIPUG00000023423	ddx43	96	70.846	ENSSPAG00000006858	ddx43	98	69.521	Stegastes_partitus
ENSIPUG00000023423	ddx43	85	67.179	ENSTGUG00000012684	-	97	67.179	Taeniopygia_guttata
ENSIPUG00000023423	ddx43	96	60.570	ENSTRUG00000012795	ddx43	99	59.738	Takifugu_rubripes
ENSIPUG00000023423	ddx43	85	69.257	ENSTNIG00000009822	ddx43	99	69.655	Tetraodon_nigroviridis
ENSIPUG00000023423	ddx43	97	61.391	ENSXETG00000011767	ddx43	99	60.088	Xenopus_tropicalis
ENSIPUG00000023423	ddx43	96	64.060	ENSXCOG00000013810	ddx43	100	63.439	Xiphophorus_couchianus
ENSIPUG00000023423	ddx43	96	67.651	ENSXMAG00000017126	ddx43	100	66.477	Xiphophorus_maculatus