EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000023478 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 7170 bases
Position: chr4:14540557-14547726
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000034947	RVT_1	PF00078.27	2.1e-08	1	1
ENSIPUP00000034947	zf-CCHC	PF00098.23	0.00039	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000036324	-	1917	-	ENSIPUP00000034947	638 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000023478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000023478's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000023478	-	97	87.801	ENSIPUG00000020583	-	94	86.888
ENSIPUG00000023478	-	95	88.436	ENSIPUG00000009957	-	97	87.942
ENSIPUG00000023478	-	98	81.804	ENSIPUG00000000467	-	89	81.804

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000023478	-	54	35.248	ENSAPOG00000012172	-	68	34.987	Acanthochromis_polyacanthus
ENSIPUG00000023478	-	89	33.758	ENSACAG00000029367	-	66	45.779	Anolis_carolinensis
ENSIPUG00000023478	-	85	46.484	ENSAMXG00000038544	-	86	46.484	Astyanax_mexicanus
ENSIPUG00000023478	-	89	48.722	ENSAMXG00000036897	-	80	48.722	Astyanax_mexicanus
ENSIPUG00000023478	-	94	49.433	ENSAMXG00000043875	-	89	49.433	Astyanax_mexicanus
ENSIPUG00000023478	-	87	46.701	ENSAMXG00000030934	-	90	46.701	Astyanax_mexicanus
ENSIPUG00000023478	-	90	50.083	ENSAMXG00000033831	-	77	50.083	Astyanax_mexicanus
ENSIPUG00000023478	-	87	50.441	ENSAMXG00000029689	-	77	50.175	Astyanax_mexicanus
ENSIPUG00000023478	-	89	41.216	ENSKMAG00000021728	-	89	41.216	Kryptolebias_marmoratus
ENSIPUG00000023478	-	87	40.348	ENSORLG00000027546	-	81	40.348	Oryzias_latipes
ENSIPUG00000023478	-	91	39.222	ENSORLG00000025074	-	88	39.194	Oryzias_latipes
ENSIPUG00000023478	-	72	32.573	ENSORLG00000004601	-	60	32.573	Oryzias_latipes
ENSIPUG00000023478	-	89	38.851	ENSORLG00020019360	-	85	38.806	Oryzias_latipes_hni
ENSIPUG00000023478	-	88	38.501	ENSORLG00020008270	-	83	38.501	Oryzias_latipes_hni
ENSIPUG00000023478	-	90	38.667	ENSORLG00020018037	-	87	38.667	Oryzias_latipes_hni
ENSIPUG00000023478	-	89	42.288	ENSPKIG00000021000	-	97	42.379	Paramormyrops_kingsleyae
ENSIPUG00000023478	-	97	41.905	ENSPKIG00000000452	-	95	41.905	Paramormyrops_kingsleyae
ENSIPUG00000023478	-	89	48.696	ENSPNAG00000014076	-	90	48.696	Pygocentrus_nattereri
ENSIPUG00000023478	-	94	47.954	ENSPNAG00000003267	-	88	48.567	Pygocentrus_nattereri