EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000023513 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 16275 bases
Position: chr10:11204254-11220528
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000035005	zf-C2H2	PF00096.26	6.6e-39	1	6
ENSIPUP00000035005	zf-C2H2	PF00096.26	6.6e-39	2	6
ENSIPUP00000035005	zf-C2H2	PF00096.26	6.6e-39	3	6
ENSIPUP00000035005	zf-C2H2	PF00096.26	6.6e-39	4	6
ENSIPUP00000035005	zf-C2H2	PF00096.26	6.6e-39	5	6
ENSIPUP00000035005	zf-C2H2	PF00096.26	6.6e-39	6	6
ENSIPUP00000035005	zf-met	PF12874.7	2e-05	1	2
ENSIPUP00000035005	zf-met	PF12874.7	2e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000036382	-	4354	-	ENSIPUP00000035005	522 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000023513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000023513's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000023513	-	98	69.325	ENSIPUG00000015294	-	99	69.325
ENSIPUG00000023513	-	61	33.161	ENSIPUG00000018102	znf646	63	33.333
ENSIPUG00000023513	-	69	40.449	ENSIPUG00000017053	prdm12b	70	45.000
ENSIPUG00000023513	-	83	60.338	ENSIPUG00000017575	-	94	61.009
ENSIPUG00000023513	-	76	41.361	ENSIPUG00000001248	prdm5	99	41.361
ENSIPUG00000023513	-	93	60.699	ENSIPUG00000003011	-	99	62.673
ENSIPUG00000023513	-	51	61.137	ENSIPUG00000005581	-	76	63.590
ENSIPUG00000023513	-	51	40.278	ENSIPUG00000003040	zbtb47a	76	40.686
ENSIPUG00000023513	-	59	59.009	ENSIPUG00000006916	-	98	60.190
ENSIPUG00000023513	-	50	64.062	ENSIPUG00000021556	-	91	65.341
ENSIPUG00000023513	-	53	58.559	ENSIPUG00000023688	-	94	62.637
ENSIPUG00000023513	-	50	59.746	ENSIPUG00000015400	-	93	65.899
ENSIPUG00000023513	-	98	58.333	ENSIPUG00000015203	-	96	58.333
ENSIPUG00000023513	-	50	59.804	ENSIPUG00000023635	-	95	65.217
ENSIPUG00000023513	-	89	60.741	ENSIPUG00000014798	-	100	60.741
ENSIPUG00000023513	-	98	63.090	ENSIPUG00000015468	-	99	64.035
ENSIPUG00000023513	-	98	62.000	ENSIPUG00000015177	-	97	62.000
ENSIPUG00000023513	-	53	50.362	ENSIPUG00000004428	-	92	50.362
ENSIPUG00000023513	-	87	55.556	ENSIPUG00000023761	-	93	55.556
ENSIPUG00000023513	-	53	61.538	ENSIPUG00000003960	-	90	59.330
ENSIPUG00000023513	-	51	42.000	ENSIPUG00000002075	znf341	57	33.000
ENSIPUG00000023513	-	50	39.910	ENSIPUG00000011399	zbtb47b	80	40.741
ENSIPUG00000023513	-	79	39.560	ENSIPUG00000024162	prdm4	51	32.243
ENSIPUG00000023513	-	66	60.938	ENSIPUG00000015121	-	87	61.261
ENSIPUG00000023513	-	61	60.360	ENSIPUG00000022741	-	97	62.085
ENSIPUG00000023513	-	71	44.000	ENSIPUG00000019544	PRDM12	68	45.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000023513	-	78	49.735	ENSOANG00000005426	-	94	38.583	Ornithorhynchus_anatinus