EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000023677 (Gene tree)
Gene ID: 108255124
Gene Symbol: gnl3
Alias: id:ibd2914|nstm|nucleostemin|wu:fb38a04|wu:fc55d07|zgc:123093
Full Name: G protein nucleolar 3
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 5705 bases
Position: chr21:4214146-4219850
Accession: 108255124
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000035320	GN3L_Grn1	PF08701.11	1.7e-20	1	1
ENSIPUP00000035324	GN3L_Grn1	PF08701.11	3.7e-20	1	1
ENSIPUP00000035320	MMR_HSR1	PF01926.23	2.4e-13	1	1
ENSIPUP00000035324	MMR_HSR1	PF01926.23	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000036709	-	1528	XM_017450817	ENSIPUP00000035324	509 (aa)	XP_017306306	-
ENSIPUT00000036705	-	1581	-	ENSIPUP00000035320	526 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000023677's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000023677's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000023677	gnl3	88	36.463	ENSIPUG00000015441	gnl3l	76	37.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000023677	gnl3	99	43.942	ENSG00000163938	GNL3	100	55.147	Homo_sapiens
ENSIPUG00000023677	gnl3	99	51.899	ENSAPOG00000004048	gnl3	99	51.361	Acanthochromis_polyacanthus
ENSIPUG00000023677	gnl3	99	42.934	ENSAMEG00000008456	GNL3	85	45.267	Ailuropoda_melanoleuca
ENSIPUG00000023677	gnl3	99	52.632	ENSACIG00000000545	gnl3	99	50.369	Amphilophus_citrinellus
ENSIPUG00000023677	gnl3	99	52.260	ENSAOCG00000012879	gnl3	99	51.724	Amphiprion_ocellaris
ENSIPUG00000023677	gnl3	99	52.717	ENSAPEG00000006146	gnl3	99	52.269	Amphiprion_percula
ENSIPUG00000023677	gnl3	99	52.450	ENSATEG00000024242	gnl3	99	52.450	Anabas_testudineus
ENSIPUG00000023677	gnl3	96	43.970	ENSAPLG00000005171	GNL3	100	43.542	Anas_platyrhynchos
ENSIPUG00000023677	gnl3	99	46.098	ENSACAG00000007357	GNL3	86	50.105	Anolis_carolinensis
ENSIPUG00000023677	gnl3	99	44.364	ENSANAG00000033209	GNL3	99	43.510	Aotus_nancymaae
ENSIPUG00000023677	gnl3	99	53.160	ENSACLG00000007381	gnl3	99	53.259	Astatotilapia_calliptera
ENSIPUG00000023677	gnl3	91	72.785	ENSAMXG00000020880	gnl3	99	63.441	Astyanax_mexicanus
ENSIPUG00000023677	gnl3	99	43.986	ENSBTAG00000014549	GNL3	99	43.548	Bos_taurus
ENSIPUG00000023677	gnl3	99	43.144	ENSCJAG00000044256	-	99	42.413	Callithrix_jacchus
ENSIPUG00000023677	gnl3	99	43.144	ENSCJAG00000006864	-	99	42.413	Callithrix_jacchus
ENSIPUG00000023677	gnl3	99	43.447	ENSCAFG00000009004	GNL3	99	42.986	Canis_familiaris
ENSIPUG00000023677	gnl3	94	45.437	ENSCAFG00020002613	GNL3	89	45.895	Canis_lupus_dingo
ENSIPUG00000023677	gnl3	99	44.828	ENSCHIG00000022181	GNL3	99	44.465	Capra_hircus
ENSIPUG00000023677	gnl3	99	42.419	ENSTSYG00000006851	GNL3	85	45.912	Carlito_syrichta
ENSIPUG00000023677	gnl3	99	42.000	ENSCPOG00000000282	GNL3	87	45.032	Cavia_porcellus
ENSIPUG00000023677	gnl3	99	43.431	ENSCCAG00000033281	GNL3	99	42.962	Cebus_capucinus
ENSIPUG00000023677	gnl3	99	43.942	ENSCATG00000040886	GNL3	100	42.125	Cercocebus_atys
ENSIPUG00000023677	gnl3	99	44.161	ENSCLAG00000010109	-	99	44.102	Chinchilla_lanigera
ENSIPUG00000023677	gnl3	99	44.123	ENSCSAG00000013315	GNL3	99	43.038	Chlorocebus_sabaeus
ENSIPUG00000023677	gnl3	98	43.504	ENSCHOG00000002726	GNL3	83	44.958	Choloepus_hoffmanni
ENSIPUG00000023677	gnl3	79	46.789	ENSCPBG00000018330	-	94	46.047	Chrysemys_picta_bellii
ENSIPUG00000023677	gnl3	98	43.223	ENSCANG00000039969	GNL3	100	42.125	Colobus_angolensis_palliatus
ENSIPUG00000023677	gnl3	99	43.590	ENSCGRG00001020950	Gnl3	86	46.709	Cricetulus_griseus_chok1gshd
ENSIPUG00000023677	gnl3	99	43.590	ENSCGRG00000015225	Gnl3	86	46.709	Cricetulus_griseus_crigri
ENSIPUG00000023677	gnl3	99	49.725	ENSCSEG00000005009	gnl3	87	54.526	Cynoglossus_semilaevis
ENSIPUG00000023677	gnl3	99	48.820	ENSCVAG00000010679	gnl3	99	48.270	Cyprinodon_variegatus
ENSIPUG00000023677	gnl3	92	65.684	ENSDARG00000006219	gnl3	99	58.273	Danio_rerio
ENSIPUG00000023677	gnl3	99	43.214	ENSDNOG00000001037	GNL3	84	46.429	Dasypus_novemcinctus
ENSIPUG00000023677	gnl3	99	44.220	ENSDORG00000000674	Gnl3	99	43.303	Dipodomys_ordii
ENSIPUG00000023677	gnl3	91	77.273	ENSETEG00000016534	-	73	77.273	Echinops_telfairi
ENSIPUG00000023677	gnl3	99	44.444	ENSEASG00005014636	GNL3	86	46.781	Equus_asinus_asinus
ENSIPUG00000023677	gnl3	100	44.286	ENSECAG00000014850	GNL3	85	46.653	Equus_caballus
ENSIPUG00000023677	gnl3	99	43.248	ENSEEUG00000004427	GNL3	86	46.122	Erinaceus_europaeus
ENSIPUG00000023677	gnl3	99	53.345	ENSELUG00000008767	gnl3	99	53.694	Esox_lucius
ENSIPUG00000023677	gnl3	99	43.728	ENSFCAG00000015719	GNL3	99	42.908	Felis_catus
ENSIPUG00000023677	gnl3	99	46.858	ENSFALG00000008957	GNL3	99	46.320	Ficedula_albicollis
ENSIPUG00000023677	gnl3	99	44.037	ENSFDAG00000020679	GNL3	99	43.303	Fukomys_damarensis
ENSIPUG00000023677	gnl3	99	49.183	ENSFHEG00000020897	gnl3	99	49.091	Fundulus_heteroclitus
ENSIPUG00000023677	gnl3	99	47.955	ENSGMOG00000001745	gnl3	84	54.195	Gadus_morhua
ENSIPUG00000023677	gnl3	99	45.026	ENSGALG00000001613	GNL3	83	48.218	Gallus_gallus
ENSIPUG00000023677	gnl3	99	44.677	ENSGAFG00000007184	gnl3	99	44.802	Gambusia_affinis
ENSIPUG00000023677	gnl3	99	50.452	ENSGACG00000000309	gnl3	99	49.909	Gasterosteus_aculeatus
ENSIPUG00000023677	gnl3	83	45.514	ENSGAGG00000021579	-	80	48.476	Gopherus_agassizii
ENSIPUG00000023677	gnl3	99	43.942	ENSGGOG00000011444	GNL3	85	46.089	Gorilla_gorilla
ENSIPUG00000023677	gnl3	99	53.455	ENSHBUG00000001340	gnl3	99	53.188	Haplochromis_burtoni
ENSIPUG00000023677	gnl3	99	43.739	ENSHGLG00000018299	GNL3	85	45.053	Heterocephalus_glaber_female
ENSIPUG00000023677	gnl3	100	46.057	ENSHCOG00000009446	gnl3	99	46.486	Hippocampus_comes
ENSIPUG00000023677	gnl3	99	42.780	ENSSTOG00000000356	GNL3	100	41.682	Ictidomys_tridecemlineatus
ENSIPUG00000023677	gnl3	99	43.223	ENSJJAG00000021993	Gnl3	99	44.139	Jaculus_jaculus
ENSIPUG00000023677	gnl3	99	49.270	ENSKMAG00000005965	gnl3	86	53.390	Kryptolebias_marmoratus
ENSIPUG00000023677	gnl3	95	55.193	ENSLBEG00000011394	gnl3	99	51.273	Labrus_bergylta
ENSIPUG00000023677	gnl3	99	46.881	ENSLACG00000001259	GNL3	84	51.579	Latimeria_chalumnae
ENSIPUG00000023677	gnl3	94	54.545	ENSLOCG00000010542	gnl3	99	49.551	Lepisosteus_oculatus
ENSIPUG00000023677	gnl3	99	43.369	ENSLAFG00000016056	GNL3	99	42.626	Loxodonta_africana
ENSIPUG00000023677	gnl3	99	43.761	ENSMFAG00000000613	GNL3	99	43.219	Macaca_fascicularis
ENSIPUG00000023677	gnl3	98	42.857	ENSMMUG00000012511	GNL3	100	42.308	Macaca_mulatta
ENSIPUG00000023677	gnl3	98	43.040	ENSMNEG00000041979	GNL3	100	42.491	Macaca_nemestrina
ENSIPUG00000023677	gnl3	99	44.123	ENSMLEG00000027696	GNL3	99	43.038	Mandrillus_leucophaeus
ENSIPUG00000023677	gnl3	96	56.299	ENSMAMG00000008904	gnl3	99	51.920	Mastacembelus_armatus
ENSIPUG00000023677	gnl3	99	53.636	ENSMZEG00005014857	gnl3	99	53.370	Maylandia_zebra
ENSIPUG00000023677	gnl3	92	53.015	ENSMZEG00005014957	-	93	52.807	Maylandia_zebra
ENSIPUG00000023677	gnl3	91	38.235	ENSMGAG00000000848	GNL3	81	39.256	Meleagris_gallopavo
ENSIPUG00000023677	gnl3	99	43.382	ENSMAUG00000020178	Gnl3	99	42.096	Mesocricetus_auratus
ENSIPUG00000023677	gnl3	99	43.190	ENSMICG00000016373	GNL3	99	42.370	Microcebus_murinus
ENSIPUG00000023677	gnl3	99	44.199	ENSMOCG00000018437	Gnl3	99	43.278	Microtus_ochrogaster
ENSIPUG00000023677	gnl3	99	48.545	ENSMMOG00000002815	gnl3	93	54.545	Mola_mola
ENSIPUG00000023677	gnl3	99	43.728	ENSMODG00000011257	GNL3	85	48.837	Monodelphis_domestica
ENSIPUG00000023677	gnl3	91	55.021	ENSMALG00000021043	gnl3	92	55.895	Monopterus_albus
ENSIPUG00000023677	gnl3	99	43.119	MGP_CAROLIEiJ_G0019063	Gnl3	99	42.018	Mus_caroli
ENSIPUG00000023677	gnl3	99	43.486	ENSMUSG00000042354	Gnl3	100	57.792	Mus_musculus
ENSIPUG00000023677	gnl3	99	44.037	MGP_PahariEiJ_G0030080	Gnl3	99	43.670	Mus_pahari
ENSIPUG00000023677	gnl3	99	43.303	MGP_SPRETEiJ_G0019948	Gnl3	99	42.752	Mus_spretus
ENSIPUG00000023677	gnl3	99	43.636	ENSMPUG00000016777	GNL3	99	42.545	Mustela_putorius_furo
ENSIPUG00000023677	gnl3	99	43.447	ENSMLUG00000000728	GNL3	99	42.370	Myotis_lucifugus
ENSIPUG00000023677	gnl3	99	43.327	ENSNGAG00000017202	Gnl3	99	41.865	Nannospalax_galili
ENSIPUG00000023677	gnl3	92	54.334	ENSNBRG00000013161	gnl3	96	54.334	Neolamprologus_brichardi
ENSIPUG00000023677	gnl3	99	43.841	ENSNLEG00000007173	GNL3	99	42.572	Nomascus_leucogenys
ENSIPUG00000023677	gnl3	99	39.655	ENSMEUG00000011502	-	100	38.889	Notamacropus_eugenii
ENSIPUG00000023677	gnl3	83	39.414	ENSOPRG00000009356	GNL3	93	39.100	Ochotona_princeps
ENSIPUG00000023677	gnl3	99	43.013	ENSODEG00000009492	GNL3	99	42.650	Octodon_degus
ENSIPUG00000023677	gnl3	99	52.995	ENSONIG00000019335	gnl3	99	53.091	Oreochromis_niloticus
ENSIPUG00000023677	gnl3	99	46.416	ENSOANG00000013437	GNL3	99	45.931	Ornithorhynchus_anatinus
ENSIPUG00000023677	gnl3	99	43.455	ENSOCUG00000009841	GNL3	84	46.154	Oryctolagus_cuniculus
ENSIPUG00000023677	gnl3	99	51.737	ENSORLG00000016030	gnl3	87	57.203	Oryzias_latipes
ENSIPUG00000023677	gnl3	99	51.648	ENSORLG00020014358	gnl3	87	57.203	Oryzias_latipes_hni
ENSIPUG00000023677	gnl3	99	51.465	ENSORLG00015009489	gnl3	87	57.203	Oryzias_latipes_hsok
ENSIPUG00000023677	gnl3	99	53.696	ENSOMEG00000005462	gnl3	87	57.203	Oryzias_melastigma
ENSIPUG00000023677	gnl3	99	43.007	ENSOGAG00000004101	GNL3	84	46.138	Otolemur_garnettii
ENSIPUG00000023677	gnl3	99	44.365	ENSOARG00000002470	GNL3	85	47.280	Ovis_aries
ENSIPUG00000023677	gnl3	99	43.942	ENSPPAG00000019253	GNL3	99	42.857	Pan_paniscus
ENSIPUG00000023677	gnl3	99	43.728	ENSPPRG00000009550	GNL3	99	43.243	Panthera_pardus
ENSIPUG00000023677	gnl3	99	43.548	ENSPTIG00000009356	GNL3	99	43.063	Panthera_tigris_altaica
ENSIPUG00000023677	gnl3	99	43.942	ENSPTRG00000015009	GNL3	99	42.857	Pan_troglodytes
ENSIPUG00000023677	gnl3	99	41.953	ENSPANG00000016579	GNL3	99	41.410	Papio_anubis
ENSIPUG00000023677	gnl3	99	53.370	ENSPKIG00000024295	gnl3	99	53.102	Paramormyrops_kingsleyae
ENSIPUG00000023677	gnl3	98	46.786	ENSPSIG00000011486	GNL3	100	45.683	Pelodiscus_sinensis
ENSIPUG00000023677	gnl3	91	53.731	ENSPMGG00000008210	gnl3	93	49.673	Periophthalmus_magnuspinnatus
ENSIPUG00000023677	gnl3	99	44.607	ENSPEMG00000017577	Gnl3	100	43.407	Peromyscus_maniculatus_bairdii
ENSIPUG00000023677	gnl3	100	45.133	ENSPCIG00000018642	GNL3	84	48.428	Phascolarctos_cinereus
ENSIPUG00000023677	gnl3	95	53.644	ENSPFOG00000017601	gnl3	99	47.368	Poecilia_formosa
ENSIPUG00000023677	gnl3	95	53.644	ENSPLAG00000016968	gnl3	99	48.452	Poecilia_latipinna
ENSIPUG00000023677	gnl3	99	50.092	ENSPMEG00000018775	gnl3	99	50.092	Poecilia_mexicana
ENSIPUG00000023677	gnl3	99	49.534	ENSPREG00000002909	gnl3	99	49.534	Poecilia_reticulata
ENSIPUG00000023677	gnl3	99	44.123	ENSPPYG00000013800	GNL3	99	42.676	Pongo_abelii
ENSIPUG00000023677	gnl3	86	45.516	ENSPCAG00000002006	GNL3	80	45.516	Procavia_capensis
ENSIPUG00000023677	gnl3	99	44.123	ENSPCOG00000026637	GNL3	99	43.986	Propithecus_coquereli
ENSIPUG00000023677	gnl3	99	44.624	ENSPVAG00000012586	GNL3	85	47.899	Pteropus_vampyrus
ENSIPUG00000023677	gnl3	95	50.397	ENSPNYG00000005130	gnl3	94	53.780	Pundamilia_nyererei
ENSIPUG00000023677	gnl3	92	72.117	ENSPNAG00000013096	gnl3	99	62.679	Pygocentrus_nattereri
ENSIPUG00000023677	gnl3	99	43.853	ENSRNOG00000028461	Gnl3	99	43.853	Rattus_norvegicus
ENSIPUG00000023677	gnl3	99	43.580	ENSRBIG00000031778	GNL3	99	43.038	Rhinopithecus_bieti
ENSIPUG00000023677	gnl3	99	43.580	ENSRROG00000030086	GNL3	99	43.038	Rhinopithecus_roxellana
ENSIPUG00000023677	gnl3	99	42.962	ENSSBOG00000019990	GNL3	99	42.779	Saimiri_boliviensis_boliviensis
ENSIPUG00000023677	gnl3	92	49.789	ENSSHAG00000006141	GNL3	85	50.000	Sarcophilus_harrisii
ENSIPUG00000023677	gnl3	93	56.458	ENSSFOG00015021228	gnl3	99	51.756	Scleropages_formosus
ENSIPUG00000023677	gnl3	95	55.847	ENSSMAG00000006662	gnl3	99	50.638	Scophthalmus_maximus
ENSIPUG00000023677	gnl3	95	55.081	ENSSDUG00000000972	gnl3	99	50.820	Seriola_dumerili
ENSIPUG00000023677	gnl3	95	54.878	ENSSLDG00000008692	gnl3	91	50.638	Seriola_lalandi_dorsalis
ENSIPUG00000023677	gnl3	92	44.283	ENSSARG00000002226	GNL3	87	44.025	Sorex_araneus
ENSIPUG00000023677	gnl3	99	47.257	ENSSPUG00000003582	GNL3	83	51.163	Sphenodon_punctatus
ENSIPUG00000023677	gnl3	99	52.364	ENSSPAG00000020180	gnl3	99	52.000	Stegastes_partitus
ENSIPUG00000023677	gnl3	99	43.986	ENSSSCG00000011449	GNL3	99	42.626	Sus_scrofa
ENSIPUG00000023677	gnl3	99	46.004	ENSTGUG00000005774	GNL3	100	46.181	Taeniopygia_guttata
ENSIPUG00000023677	gnl3	99	47.550	ENSTRUG00000005552	gnl3	87	53.236	Takifugu_rubripes
ENSIPUG00000023677	gnl3	99	47.455	ENSTNIG00000007263	gnl3	87	52.510	Tetraodon_nigroviridis
ENSIPUG00000023677	gnl3	97	41.989	ENSTBEG00000017518	GNL3	100	41.436	Tupaia_belangeri
ENSIPUG00000023677	gnl3	68	38.571	ENSTTRG00000008574	-	67	70.787	Tursiops_truncatus
ENSIPUG00000023677	gnl3	99	44.102	ENSUAMG00000012347	GNL3	88	45.567	Ursus_americanus
ENSIPUG00000023677	gnl3	99	45.065	ENSUMAG00000021001	GNL3	84	48.115	Ursus_maritimus
ENSIPUG00000023677	gnl3	99	44.604	ENSVVUG00000024536	-	99	43.036	Vulpes_vulpes
ENSIPUG00000023677	gnl3	92	49.680	ENSXCOG00000018425	gnl3	95	53.725	Xiphophorus_couchianus
ENSIPUG00000023677	gnl3	99	48.736	ENSXMAG00000022565	gnl3	99	47.826	Xiphophorus_maculatus