EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000023701 (Gene tree)
Gene ID: 108272067
Gene Symbol: tarbp2
Alias: fj51e12|wu:fj51e12|zgc:63778
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 4845 bases
Position: chr11:18792396-18797240
Accession: 108272067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000035357	dsrm	PF00035.26	1.8e-35	1	2
ENSIPUP00000035357	dsrm	PF00035.26	1.8e-35	2	2
ENSIPUP00000035353	dsrm	PF00035.26	2.1e-35	1	2
ENSIPUP00000035353	dsrm	PF00035.26	2.1e-35	2	2
ENSIPUP00000035347	dsrm	PF00035.26	2.5e-35	1	2
ENSIPUP00000035347	dsrm	PF00035.26	2.5e-35	2	2
ENSIPUP00000035357	DND1_DSRM	PF14709.7	8.4e-13	1	1
ENSIPUP00000035353	DND1_DSRM	PF14709.7	1e-12	1	1
ENSIPUP00000035347	DND1_DSRM	PF14709.7	1.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000036734	-	1113	XM_017480205	ENSIPUP00000035347	370 (aa)	XP_017335694	A0A2D0RYX3
ENSIPUT00000036741	-	1047	XM_017480206	ENSIPUP00000035353	348 (aa)	XP_017335695	W5UKX7
ENSIPUT00000036745	-	1017	-	ENSIPUP00000035357	338 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000023701's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000023701's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000023701	tarbp2	91	44.984	ENSIPUG00000019396	prkra	95	44.013

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000023701	tarbp2	100	66.125	ENSG00000139546	TARBP2	92	91.358	Homo_sapiens
ENSIPUG00000023701	tarbp2	100	82.235	ENSAPOG00000019892	tarbp2	100	82.857	Acanthochromis_polyacanthus
ENSIPUG00000023701	tarbp2	100	66.938	ENSAMEG00000012601	TARBP2	100	65.426	Ailuropoda_melanoleuca
ENSIPUG00000023701	tarbp2	100	81.924	ENSACIG00000016780	tarbp2	100	81.948	Amphilophus_citrinellus
ENSIPUG00000023701	tarbp2	100	82.521	ENSAOCG00000005201	tarbp2	100	82.857	Amphiprion_ocellaris
ENSIPUG00000023701	tarbp2	100	82.521	ENSAPEG00000008376	tarbp2	100	82.857	Amphiprion_percula
ENSIPUG00000023701	tarbp2	100	81.375	ENSATEG00000025012	tarbp2	100	82.000	Anabas_testudineus
ENSIPUG00000023701	tarbp2	100	68.579	ENSACAG00000001100	TARBP2	100	68.767	Anolis_carolinensis
ENSIPUG00000023701	tarbp2	100	65.583	ENSANAG00000034453	TARBP2	94	76.623	Aotus_nancymaae
ENSIPUG00000023701	tarbp2	95	81.982	ENSACLG00000018569	tarbp2	96	82.530	Astatotilapia_calliptera
ENSIPUG00000023701	tarbp2	100	88.793	ENSAMXG00000016665	tarbp2	100	88.793	Astyanax_mexicanus
ENSIPUG00000023701	tarbp2	100	66.396	ENSBTAG00000000435	TARBP2	100	65.426	Bos_taurus
ENSIPUG00000023701	tarbp2	100	65.583	ENSCJAG00000018668	TARBP2	100	64.362	Callithrix_jacchus
ENSIPUG00000023701	tarbp2	100	68.195	ENSCAFG00000006874	TARBP2	100	68.195	Canis_familiaris
ENSIPUG00000023701	tarbp2	100	66.667	ENSCAFG00020020735	TARBP2	100	68.116	Canis_lupus_dingo
ENSIPUG00000023701	tarbp2	100	65.426	ENSCHIG00000026017	TARBP2	100	66.138	Capra_hircus
ENSIPUG00000023701	tarbp2	100	66.667	ENSTSYG00000035683	TARBP2	94	76.623	Carlito_syrichta
ENSIPUG00000023701	tarbp2	64	69.683	ENSCAPG00000008981	TARBP2	98	69.683	Cavia_aperea
ENSIPUG00000023701	tarbp2	100	66.938	ENSCPOG00000001009	TARBP2	100	64.815	Cavia_porcellus
ENSIPUG00000023701	tarbp2	100	65.583	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSIPUG00000023701	tarbp2	100	65.583	ENSCATG00000026344	TARBP2	94	76.623	Cercocebus_atys
ENSIPUG00000023701	tarbp2	100	65.312	ENSCLAG00000009175	TARBP2	100	64.550	Chinchilla_lanigera
ENSIPUG00000023701	tarbp2	100	66.125	ENSCSAG00000005479	TARBP2	100	64.362	Chlorocebus_sabaeus
ENSIPUG00000023701	tarbp2	100	69.697	ENSCPBG00000000654	TARBP2	100	71.681	Chrysemys_picta_bellii
ENSIPUG00000023701	tarbp2	100	65.854	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSIPUG00000023701	tarbp2	100	66.033	ENSCGRG00001011856	TARBP2	100	64.894	Cricetulus_griseus_chok1gshd
ENSIPUG00000023701	tarbp2	100	66.033	ENSCGRG00000009088	TARBP2	100	67.490	Cricetulus_griseus_crigri
ENSIPUG00000023701	tarbp2	100	82.235	ENSCSEG00000010631	tarbp2	100	82.235	Cynoglossus_semilaevis
ENSIPUG00000023701	tarbp2	100	81.375	ENSCVAG00000009832	tarbp2	100	81.375	Cyprinodon_variegatus
ENSIPUG00000023701	tarbp2	100	86.610	ENSDARG00000070471	tarbp2	100	86.610	Danio_rerio
ENSIPUG00000023701	tarbp2	100	66.125	ENSDNOG00000002144	TARBP2	97	66.947	Dasypus_novemcinctus
ENSIPUG00000023701	tarbp2	64	69.231	ENSDORG00000001390	Tarbp2	91	69.231	Dipodomys_ordii
ENSIPUG00000023701	tarbp2	90	79.439	ENSETEG00000002458	TARBP2	83	80.952	Echinops_telfairi
ENSIPUG00000023701	tarbp2	94	60.188	ENSEBUG00000002377	tarbp2	98	61.129	Eptatretus_burgeri
ENSIPUG00000023701	tarbp2	100	66.396	ENSEASG00005010030	TARBP2	100	66.396	Equus_asinus_asinus
ENSIPUG00000023701	tarbp2	100	69.405	ENSECAG00000011695	TARBP2	94	76.623	Equus_caballus
ENSIPUG00000023701	tarbp2	84	64.444	ENSEEUG00000001128	-	99	64.444	Erinaceus_europaeus
ENSIPUG00000023701	tarbp2	100	83.429	ENSELUG00000010642	tarbp2	100	84.375	Esox_lucius
ENSIPUG00000023701	tarbp2	100	66.938	ENSFCAG00000007757	TARBP2	100	65.426	Felis_catus
ENSIPUG00000023701	tarbp2	100	66.125	ENSFDAG00000011932	TARBP2	100	68.033	Fukomys_damarensis
ENSIPUG00000023701	tarbp2	93	85.231	ENSFHEG00000016118	tarbp2	100	85.231	Fundulus_heteroclitus
ENSIPUG00000023701	tarbp2	100	80.627	ENSGMOG00000001290	tarbp2	100	80.627	Gadus_morhua
ENSIPUG00000023701	tarbp2	64	72.936	ENSGALG00000038939	-	83	72.936	Gallus_gallus
ENSIPUG00000023701	tarbp2	100	81.375	ENSGAFG00000013341	tarbp2	100	81.375	Gambusia_affinis
ENSIPUG00000023701	tarbp2	100	79.050	ENSGACG00000006645	tarbp2	100	79.330	Gasterosteus_aculeatus
ENSIPUG00000023701	tarbp2	100	69.697	ENSGAGG00000021169	TARBP2	100	69.697	Gopherus_agassizii
ENSIPUG00000023701	tarbp2	100	66.125	ENSGGOG00000012637	TARBP2	94	76.623	Gorilla_gorilla
ENSIPUG00000023701	tarbp2	100	80.286	ENSHBUG00000018639	tarbp2	100	80.802	Haplochromis_burtoni
ENSIPUG00000023701	tarbp2	100	66.125	ENSHGLG00000001284	TARBP2	97	67.227	Heterocephalus_glaber_female
ENSIPUG00000023701	tarbp2	100	66.125	ENSHGLG00100011274	TARBP2	97	67.227	Heterocephalus_glaber_male
ENSIPUG00000023701	tarbp2	100	78.510	ENSHCOG00000001027	tarbp2	100	78.510	Hippocampus_comes
ENSIPUG00000023701	tarbp2	100	66.396	ENSSTOG00000003678	TARBP2	100	68.033	Ictidomys_tridecemlineatus
ENSIPUG00000023701	tarbp2	100	82.857	ENSKMAG00000012142	tarbp2	100	82.857	Kryptolebias_marmoratus
ENSIPUG00000023701	tarbp2	100	81.285	ENSLBEG00000015027	tarbp2	97	84.290	Labrus_bergylta
ENSIPUG00000023701	tarbp2	94	66.562	ENSLACG00000007087	TARBP2	95	66.562	Latimeria_chalumnae
ENSIPUG00000023701	tarbp2	100	82.184	ENSLOCG00000005711	tarbp2	100	82.184	Lepisosteus_oculatus
ENSIPUG00000023701	tarbp2	74	61.091	ENSLAFG00000002620	TARBP2	95	61.710	Loxodonta_africana
ENSIPUG00000023701	tarbp2	100	65.583	ENSMFAG00000013567	TARBP2	94	76.623	Macaca_fascicularis
ENSIPUG00000023701	tarbp2	100	65.854	ENSMMUG00000018492	TARBP2	97	67.507	Macaca_mulatta
ENSIPUG00000023701	tarbp2	100	65.583	ENSMNEG00000036477	TARBP2	94	76.623	Macaca_nemestrina
ENSIPUG00000023701	tarbp2	100	66.097	ENSMLEG00000029583	TARBP2	94	76.623	Mandrillus_leucophaeus
ENSIPUG00000023701	tarbp2	94	84.424	ENSMAMG00000010272	tarbp2	97	81.050	Mastacembelus_armatus
ENSIPUG00000023701	tarbp2	100	80.286	ENSMZEG00005006895	tarbp2	100	80.802	Maylandia_zebra
ENSIPUG00000023701	tarbp2	100	66.033	ENSMAUG00000019805	Tarbp2	97	67.135	Mesocricetus_auratus
ENSIPUG00000023701	tarbp2	93	68.116	ENSMICG00000027441	TARBP2	94	76.623	Microcebus_murinus
ENSIPUG00000023701	tarbp2	100	66.033	ENSMOCG00000003691	Tarbp2	100	65.957	Microtus_ochrogaster
ENSIPUG00000023701	tarbp2	93	82.979	ENSMMOG00000010374	tarbp2	100	82.979	Mola_mola
ENSIPUG00000023701	tarbp2	100	80.802	ENSMALG00000009773	tarbp2	100	81.662	Monopterus_albus
ENSIPUG00000023701	tarbp2	97	66.574	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSIPUG00000023701	tarbp2	97	66.574	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSIPUG00000023701	tarbp2	97	66.854	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSIPUG00000023701	tarbp2	97	66.574	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSIPUG00000023701	tarbp2	100	66.033	ENSMPUG00000005944	TARBP2	100	66.304	Mustela_putorius_furo
ENSIPUG00000023701	tarbp2	100	67.209	ENSMLUG00000010035	TARBP2	100	66.938	Myotis_lucifugus
ENSIPUG00000023701	tarbp2	100	66.125	ENSNLEG00000017690	TARBP2	94	76.623	Nomascus_leucogenys
ENSIPUG00000023701	tarbp2	94	74.295	ENSMEUG00000001916	TARBP2	95	74.295	Notamacropus_eugenii
ENSIPUG00000023701	tarbp2	64	70.588	ENSOPRG00000011397	TARBP2	98	70.588	Ochotona_princeps
ENSIPUG00000023701	tarbp2	62	68.085	ENSODEG00000013413	TARBP2	100	69.469	Octodon_degus
ENSIPUG00000023701	tarbp2	94	81.447	ENSONIG00000005115	tarbp2	95	80.805	Oreochromis_niloticus
ENSIPUG00000023701	tarbp2	97	67.227	ENSOCUG00000005700	TARBP2	97	67.227	Oryctolagus_cuniculus
ENSIPUG00000023701	tarbp2	100	80.802	ENSORLG00000005209	tarbp2	100	80.802	Oryzias_latipes
ENSIPUG00000023701	tarbp2	100	81.089	ENSORLG00020017755	tarbp2	100	81.089	Oryzias_latipes_hni
ENSIPUG00000023701	tarbp2	100	80.802	ENSORLG00015013237	tarbp2	100	80.802	Oryzias_latipes_hsok
ENSIPUG00000023701	tarbp2	100	81.948	ENSOMEG00000018860	tarbp2	100	81.948	Oryzias_melastigma
ENSIPUG00000023701	tarbp2	100	65.583	ENSOGAG00000001744	TARBP2	97	66.667	Otolemur_garnettii
ENSIPUG00000023701	tarbp2	100	66.129	ENSOARG00000016437	TARBP2	100	66.129	Ovis_aries
ENSIPUG00000023701	tarbp2	100	66.125	ENSPPAG00000030429	TARBP2	94	76.623	Pan_paniscus
ENSIPUG00000023701	tarbp2	100	66.938	ENSPPRG00000000189	TARBP2	100	65.426	Panthera_pardus
ENSIPUG00000023701	tarbp2	100	68.889	ENSPTIG00000007859	TARBP2	100	68.889	Panthera_tigris_altaica
ENSIPUG00000023701	tarbp2	100	66.125	ENSPTRG00000005020	TARBP2	94	76.623	Pan_troglodytes
ENSIPUG00000023701	tarbp2	100	65.583	ENSPANG00000010689	TARBP2	94	76.623	Papio_anubis
ENSIPUG00000023701	tarbp2	100	81.006	ENSPKIG00000002455	tarbp2	100	81.006	Paramormyrops_kingsleyae
ENSIPUG00000023701	tarbp2	100	81.375	ENSPMGG00000006497	tarbp2	100	81.089	Periophthalmus_magnuspinnatus
ENSIPUG00000023701	tarbp2	100	64.674	ENSPEMG00000014285	Tarbp2	97	65.730	Peromyscus_maniculatus_bairdii
ENSIPUG00000023701	tarbp2	91	62.222	ENSPMAG00000000105	tarbp2	99	62.222	Petromyzon_marinus
ENSIPUG00000023701	tarbp2	94	74.295	ENSPCIG00000006672	TARBP2	88	74.295	Phascolarctos_cinereus
ENSIPUG00000023701	tarbp2	100	81.662	ENSPFOG00000007586	tarbp2	100	81.662	Poecilia_formosa
ENSIPUG00000023701	tarbp2	100	81.948	ENSPLAG00000017659	tarbp2	100	81.948	Poecilia_latipinna
ENSIPUG00000023701	tarbp2	100	81.662	ENSPMEG00000007775	tarbp2	100	81.662	Poecilia_mexicana
ENSIPUG00000023701	tarbp2	100	81.375	ENSPREG00000007815	tarbp2	100	81.375	Poecilia_reticulata
ENSIPUG00000023701	tarbp2	100	68.023	ENSPPYG00000004583	TARBP2	100	68.023	Pongo_abelii
ENSIPUG00000023701	tarbp2	78	64.261	ENSPCAG00000005352	TARBP2	60	71.041	Procavia_capensis
ENSIPUG00000023701	tarbp2	100	66.396	ENSPCOG00000013102	TARBP2	94	76.623	Propithecus_coquereli
ENSIPUG00000023701	tarbp2	100	66.396	ENSPVAG00000012286	TARBP2	100	66.396	Pteropus_vampyrus
ENSIPUG00000023701	tarbp2	100	80.286	ENSPNYG00000014125	tarbp2	100	80.802	Pundamilia_nyererei
ENSIPUG00000023701	tarbp2	100	92.241	ENSPNAG00000011128	tarbp2	100	92.241	Pygocentrus_nattereri
ENSIPUG00000023701	tarbp2	97	66.011	ENSRNOG00000042355	Tarbp2	97	66.573	Rattus_norvegicus
ENSIPUG00000023701	tarbp2	100	65.854	ENSRBIG00000027150	TARBP2	94	76.623	Rhinopithecus_bieti
ENSIPUG00000023701	tarbp2	100	65.854	ENSRROG00000044783	TARBP2	94	76.623	Rhinopithecus_roxellana
ENSIPUG00000023701	tarbp2	100	65.312	ENSSBOG00000027305	TARBP2	94	76.623	Saimiri_boliviensis_boliviensis
ENSIPUG00000023701	tarbp2	93	73.248	ENSSHAG00000007064	TARBP2	100	73.248	Sarcophilus_harrisii
ENSIPUG00000023701	tarbp2	100	79.224	ENSSFOG00015010784	tarbp2	100	79.444	Scleropages_formosus
ENSIPUG00000023701	tarbp2	100	80.563	ENSSMAG00000012769	tarbp2	100	81.408	Scophthalmus_maximus
ENSIPUG00000023701	tarbp2	100	82.521	ENSSDUG00000018818	tarbp2	100	82.808	Seriola_dumerili
ENSIPUG00000023701	tarbp2	100	82.521	ENSSLDG00000001835	tarbp2	100	82.808	Seriola_lalandi_dorsalis
ENSIPUG00000023701	tarbp2	78	67.662	ENSSARG00000001010	TARBP2	72	67.662	Sorex_araneus
ENSIPUG00000023701	tarbp2	100	52.941	ENSSPUG00000005895	TARBP2	100	52.586	Sphenodon_punctatus
ENSIPUG00000023701	tarbp2	100	82.521	ENSSPAG00000022797	tarbp2	100	82.521	Stegastes_partitus
ENSIPUG00000023701	tarbp2	100	66.396	ENSSSCG00000000276	TARBP2	100	68.116	Sus_scrofa
ENSIPUG00000023701	tarbp2	70	58.824	ENSTGUG00000017031	TARBP2	100	57.252	Taeniopygia_guttata
ENSIPUG00000023701	tarbp2	100	82.521	ENSTRUG00000014379	tarbp2	100	82.521	Takifugu_rubripes
ENSIPUG00000023701	tarbp2	100	81.375	ENSTNIG00000007065	tarbp2	100	81.375	Tetraodon_nigroviridis
ENSIPUG00000023701	tarbp2	100	67.480	ENSTTRG00000017177	TARBP2	97	68.067	Tursiops_truncatus
ENSIPUG00000023701	tarbp2	100	67.209	ENSUAMG00000009011	TARBP2	100	65.691	Ursus_americanus
ENSIPUG00000023701	tarbp2	100	66.396	ENSUMAG00000010461	TARBP2	100	64.894	Ursus_maritimus
ENSIPUG00000023701	tarbp2	100	66.667	ENSVVUG00000028150	TARBP2	100	68.116	Vulpes_vulpes
ENSIPUG00000023701	tarbp2	94	71.302	ENSXETG00000012644	tarbp2	98	69.653	Xenopus_tropicalis
ENSIPUG00000023701	tarbp2	100	81.948	ENSXMAG00000017836	tarbp2	100	81.948	Xiphophorus_maculatus