EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000023815 (Gene tree)
Gene ID: 100528397
Gene Symbol: rnaseh2b
Alias: rnh2b
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 12770 bases
Position: chr6:15587024-15599793
Accession: 100528397
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000035537	RNase_H2-Ydr279	PF09468.10	7.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000036933	-	5662	-	ENSIPUP00000035537	307 (aa)	-	E3TEX9

Gene Model

Click here to download ENSIPUG00000023815's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000023815's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000023815	rnaseh2b	88	52.768	ENSG00000136104	RNASEH2B	98	56.349	Homo_sapiens
ENSIPUG00000023815	rnaseh2b	100	73.616	ENSAPOG00000010496	rnaseh2b	100	73.616	Acanthochromis_polyacanthus
ENSIPUG00000023815	rnaseh2b	87	52.555	ENSAMEG00000012040	RNASEH2B	92	52.555	Ailuropoda_melanoleuca
ENSIPUG00000023815	rnaseh2b	100	62.866	ENSACIG00000021991	rnaseh2b	99	67.647	Amphilophus_citrinellus
ENSIPUG00000023815	rnaseh2b	100	73.616	ENSAOCG00000013398	rnaseh2b	100	73.616	Amphiprion_ocellaris
ENSIPUG00000023815	rnaseh2b	100	73.290	ENSAPEG00000006033	rnaseh2b	100	73.290	Amphiprion_percula
ENSIPUG00000023815	rnaseh2b	100	72.964	ENSATEG00000008370	rnaseh2b	100	72.964	Anabas_testudineus
ENSIPUG00000023815	rnaseh2b	83	62.257	ENSAPLG00000008955	RNASEH2B	99	62.825	Anas_platyrhynchos
ENSIPUG00000023815	rnaseh2b	93	55.363	ENSACAG00000011679	RNASEH2B	97	55.363	Anolis_carolinensis
ENSIPUG00000023815	rnaseh2b	88	52.768	ENSANAG00000020662	RNASEH2B	87	52.768	Aotus_nancymaae
ENSIPUG00000023815	rnaseh2b	100	71.661	ENSACLG00000000467	rnaseh2b	100	71.661	Astatotilapia_calliptera
ENSIPUG00000023815	rnaseh2b	99	82.623	ENSAMXG00000014351	rnaseh2b	99	82.623	Astyanax_mexicanus
ENSIPUG00000023815	rnaseh2b	87	52.399	ENSBTAG00000020149	RNASEH2B	87	52.399	Bos_taurus
ENSIPUG00000023815	rnaseh2b	87	52.060	ENSCJAG00000008585	-	88	52.060	Callithrix_jacchus
ENSIPUG00000023815	rnaseh2b	73	45.740	ENSCJAG00000003822	-	82	45.740	Callithrix_jacchus
ENSIPUG00000023815	rnaseh2b	99	48.544	ENSCAFG00000004295	RNASEH2B	94	48.867	Canis_familiaris
ENSIPUG00000023815	rnaseh2b	88	51.471	ENSCAFG00020000250	RNASEH2B	89	52.768	Canis_lupus_dingo
ENSIPUG00000023815	rnaseh2b	96	49.329	ENSCHIG00000018220	RNASEH2B	97	49.329	Capra_hircus
ENSIPUG00000023815	rnaseh2b	77	48.954	ENSCHIG00000012982	-	84	48.954	Capra_hircus
ENSIPUG00000023815	rnaseh2b	86	45.865	ENSTSYG00000031177	-	86	45.865	Carlito_syrichta
ENSIPUG00000023815	rnaseh2b	88	51.292	ENSTSYG00000009176	-	88	51.292	Carlito_syrichta
ENSIPUG00000023815	rnaseh2b	88	46.494	ENSCAPG00000009978	RNASEH2B	92	46.863	Cavia_aperea
ENSIPUG00000023815	rnaseh2b	88	50.916	ENSCPOG00000032527	RNASEH2B	88	50.916	Cavia_porcellus
ENSIPUG00000023815	rnaseh2b	88	52.768	ENSCCAG00000026979	RNASEH2B	88	52.809	Cebus_capucinus
ENSIPUG00000023815	rnaseh2b	85	52.490	ENSCATG00000031336	RNASEH2B	74	52.490	Cercocebus_atys
ENSIPUG00000023815	rnaseh2b	87	53.875	ENSCLAG00000003517	RNASEH2B	74	53.875	Chinchilla_lanigera
ENSIPUG00000023815	rnaseh2b	85	51.880	ENSCSAG00000017701	RNASEH2B	81	51.880	Chlorocebus_sabaeus
ENSIPUG00000023815	rnaseh2b	76	55.782	ENSCHOG00000013688	RNASEH2B	95	43.878	Choloepus_hoffmanni
ENSIPUG00000023815	rnaseh2b	99	57.705	ENSCPBG00000008684	RNASEH2B	94	57.705	Chrysemys_picta_bellii
ENSIPUG00000023815	rnaseh2b	93	37.000	ENSCING00000016454	-	98	37.000	Ciona_intestinalis
ENSIPUG00000023815	rnaseh2b	88	51.825	ENSCANG00000041511	-	88	51.825	Colobus_angolensis_palliatus
ENSIPUG00000023815	rnaseh2b	87	51.673	ENSCGRG00001000611	Rnaseh2b	87	52.593	Cricetulus_griseus_chok1gshd
ENSIPUG00000023815	rnaseh2b	87	51.673	ENSCGRG00000006077	Rnaseh2b	87	52.593	Cricetulus_griseus_crigri
ENSIPUG00000023815	rnaseh2b	100	74.267	ENSCSEG00000004910	rnaseh2b	100	74.267	Cynoglossus_semilaevis
ENSIPUG00000023815	rnaseh2b	100	71.987	ENSCVAG00000005212	rnaseh2b	100	71.987	Cyprinodon_variegatus
ENSIPUG00000023815	rnaseh2b	99	77.705	ENSDARG00000005128	rnaseh2b	99	77.705	Danio_rerio
ENSIPUG00000023815	rnaseh2b	86	48.134	ENSDNOG00000034290	-	86	48.134	Dasypus_novemcinctus
ENSIPUG00000023815	rnaseh2b	88	51.103	ENSDNOG00000049666	-	88	51.103	Dasypus_novemcinctus
ENSIPUG00000023815	rnaseh2b	88	52.030	ENSDORG00000010708	Rnaseh2b	87	52.030	Dipodomys_ordii
ENSIPUG00000023815	rnaseh2b	88	30.233	FBgn0030507	CG11164	87	30.233	Drosophila_melanogaster
ENSIPUG00000023815	rnaseh2b	84	41.085	ENSEBUG00000005965	rnaseh2b	98	41.085	Eptatretus_burgeri
ENSIPUG00000023815	rnaseh2b	88	54.212	ENSEASG00005017323	RNASEH2B	87	54.212	Equus_asinus_asinus
ENSIPUG00000023815	rnaseh2b	88	54.212	ENSECAG00000014262	RNASEH2B	87	54.212	Equus_caballus
ENSIPUG00000023815	rnaseh2b	100	74.267	ENSELUG00000019560	rnaseh2b	100	74.267	Esox_lucius
ENSIPUG00000023815	rnaseh2b	85	51.724	ENSFCAG00000014257	RNASEH2B	82	51.724	Felis_catus
ENSIPUG00000023815	rnaseh2b	92	60.915	ENSFALG00000008435	RNASEH2B	96	60.915	Ficedula_albicollis
ENSIPUG00000023815	rnaseh2b	88	51.103	ENSFDAG00000009920	RNASEH2B	94	51.292	Fukomys_damarensis
ENSIPUG00000023815	rnaseh2b	100	71.336	ENSFHEG00000012160	rnaseh2b	100	71.336	Fundulus_heteroclitus
ENSIPUG00000023815	rnaseh2b	100	65.495	ENSGMOG00000016830	rnaseh2b	100	65.495	Gadus_morhua
ENSIPUG00000023815	rnaseh2b	95	57.823	ENSGALG00000017015	RNASEH2B	99	58.497	Gallus_gallus
ENSIPUG00000023815	rnaseh2b	100	69.381	ENSGAFG00000021222	rnaseh2b	100	69.381	Gambusia_affinis
ENSIPUG00000023815	rnaseh2b	100	69.010	ENSGACG00000002821	rnaseh2b	100	69.010	Gasterosteus_aculeatus
ENSIPUG00000023815	rnaseh2b	89	60.949	ENSGAGG00000014722	RNASEH2B	98	60.949	Gopherus_agassizii
ENSIPUG00000023815	rnaseh2b	88	52.190	ENSGGOG00000001044	RNASEH2B	88	52.190	Gorilla_gorilla
ENSIPUG00000023815	rnaseh2b	100	72.313	ENSHBUG00000006049	rnaseh2b	100	72.313	Haplochromis_burtoni
ENSIPUG00000023815	rnaseh2b	88	52.206	ENSHGLG00100015953	RNASEH2B	92	52.399	Heterocephalus_glaber_male
ENSIPUG00000023815	rnaseh2b	100	67.638	ENSHCOG00000003318	rnaseh2b	100	67.638	Hippocampus_comes
ENSIPUG00000023815	rnaseh2b	88	53.137	ENSSTOG00000015126	RNASEH2B	92	53.137	Ictidomys_tridecemlineatus
ENSIPUG00000023815	rnaseh2b	89	50.916	ENSJJAG00000013335	Rnaseh2b	92	50.916	Jaculus_jaculus
ENSIPUG00000023815	rnaseh2b	100	72.638	ENSKMAG00000002198	rnaseh2b	100	72.638	Kryptolebias_marmoratus
ENSIPUG00000023815	rnaseh2b	100	73.290	ENSLBEG00000019331	rnaseh2b	100	73.290	Labrus_bergylta
ENSIPUG00000023815	rnaseh2b	68	62.264	ENSLACG00000010782	RNASEH2B	90	62.946	Latimeria_chalumnae
ENSIPUG00000023815	rnaseh2b	100	70.033	ENSLOCG00000009296	rnaseh2b	100	70.033	Lepisosteus_oculatus
ENSIPUG00000023815	rnaseh2b	88	51.481	ENSLAFG00000030158	RNASEH2B	87	51.481	Loxodonta_africana
ENSIPUG00000023815	rnaseh2b	88	52.399	ENSMFAG00000038464	-	87	52.399	Macaca_fascicularis
ENSIPUG00000023815	rnaseh2b	88	48.339	ENSMMUG00000021746	RNASEH2B	86	48.339	Macaca_mulatta
ENSIPUG00000023815	rnaseh2b	88	52.399	ENSMNEG00000030580	RNASEH2B	87	52.399	Macaca_nemestrina
ENSIPUG00000023815	rnaseh2b	88	51.825	ENSMLEG00000043911	-	88	51.825	Mandrillus_leucophaeus
ENSIPUG00000023815	rnaseh2b	100	73.941	ENSMAMG00000017109	rnaseh2b	100	73.941	Mastacembelus_armatus
ENSIPUG00000023815	rnaseh2b	100	67.752	ENSMZEG00005021926	rnaseh2b	100	67.752	Maylandia_zebra
ENSIPUG00000023815	rnaseh2b	88	58.974	ENSMGAG00000015025	RNASEH2B	99	59.649	Meleagris_gallopavo
ENSIPUG00000023815	rnaseh2b	87	51.673	ENSMAUG00000016520	Rnaseh2b	87	52.222	Mesocricetus_auratus
ENSIPUG00000023815	rnaseh2b	87	52.030	ENSMICG00000000528	RNASEH2B	87	52.030	Microcebus_murinus
ENSIPUG00000023815	rnaseh2b	99	70.164	ENSMMOG00000019799	rnaseh2b	99	73.427	Mola_mola
ENSIPUG00000023815	rnaseh2b	97	54.667	ENSMODG00000010775	RNASEH2B	98	54.667	Monodelphis_domestica
ENSIPUG00000023815	rnaseh2b	99	73.443	ENSMALG00000004463	rnaseh2b	99	73.443	Monopterus_albus
ENSIPUG00000023815	rnaseh2b	72	54.260	MGP_CAROLIEiJ_G0019389	Rnaseh2b	82	55.605	Mus_caroli
ENSIPUG00000023815	rnaseh2b	87	52.788	ENSMUSG00000021932	Rnaseh2b	87	52.788	Mus_musculus
ENSIPUG00000023815	rnaseh2b	88	40.694	MGP_PahariEiJ_G0030407	-	90	42.994	Mus_pahari
ENSIPUG00000023815	rnaseh2b	68	49.282	ENSMPUG00000018010	RNASEH2B	87	49.282	Mustela_putorius_furo
ENSIPUG00000023815	rnaseh2b	88	54.945	ENSMLUG00000004065	-	87	54.945	Myotis_lucifugus
ENSIPUG00000023815	rnaseh2b	100	72.313	ENSNBRG00000003253	rnaseh2b	100	72.313	Neolamprologus_brichardi
ENSIPUG00000023815	rnaseh2b	88	52.190	ENSNLEG00000003804	RNASEH2B	88	52.190	Nomascus_leucogenys
ENSIPUG00000023815	rnaseh2b	90	56.071	ENSMEUG00000003665	RNASEH2B	96	56.071	Notamacropus_eugenii
ENSIPUG00000023815	rnaseh2b	52	51.250	ENSOPRG00000003695	-	51	53.704	Ochotona_princeps
ENSIPUG00000023815	rnaseh2b	95	51.712	ENSODEG00000006793	-	94	51.890	Octodon_degus
ENSIPUG00000023815	rnaseh2b	68	48.571	ENSODEG00000005412	-	86	48.571	Octodon_degus
ENSIPUG00000023815	rnaseh2b	100	71.987	ENSONIG00000006657	rnaseh2b	100	71.987	Oreochromis_niloticus
ENSIPUG00000023815	rnaseh2b	90	57.447	ENSOANG00000015537	RNASEH2B	97	57.447	Ornithorhynchus_anatinus
ENSIPUG00000023815	rnaseh2b	88	51.481	ENSOCUG00000008904	RNASEH2B	85	52.593	Oryctolagus_cuniculus
ENSIPUG00000023815	rnaseh2b	99	70.297	ENSORLG00000011850	rnaseh2b	100	70.297	Oryzias_latipes
ENSIPUG00000023815	rnaseh2b	99	70.957	ENSORLG00020012081	rnaseh2b	100	70.957	Oryzias_latipes_hni
ENSIPUG00000023815	rnaseh2b	99	70.957	ENSORLG00015015468	rnaseh2b	100	70.957	Oryzias_latipes_hsok
ENSIPUG00000023815	rnaseh2b	99	71.287	ENSOMEG00000012441	rnaseh2b	100	71.287	Oryzias_melastigma
ENSIPUG00000023815	rnaseh2b	88	52.727	ENSOGAG00000016486	RNASEH2B	91	52.727	Otolemur_garnettii
ENSIPUG00000023815	rnaseh2b	87	52.985	ENSOARG00000008701	RNASEH2B	90	52.985	Ovis_aries
ENSIPUG00000023815	rnaseh2b	88	52.000	ENSPPAG00000026374	RNASEH2B	90	52.190	Pan_paniscus
ENSIPUG00000023815	rnaseh2b	88	50.730	ENSPPRG00000012450	RNASEH2B	89	50.730	Panthera_pardus
ENSIPUG00000023815	rnaseh2b	88	51.095	ENSPTIG00000013918	RNASEH2B	98	51.095	Panthera_tigris_altaica
ENSIPUG00000023815	rnaseh2b	88	52.015	ENSPTRG00000005886	RNASEH2B	96	53.386	Pan_troglodytes
ENSIPUG00000023815	rnaseh2b	88	51.825	ENSPANG00000022424	-	88	51.825	Papio_anubis
ENSIPUG00000023815	rnaseh2b	100	70.358	ENSPKIG00000013386	rnaseh2b	100	70.358	Paramormyrops_kingsleyae
ENSIPUG00000023815	rnaseh2b	58	55.618	ENSPSIG00000002224	RNASEH2B	83	55.618	Pelodiscus_sinensis
ENSIPUG00000023815	rnaseh2b	64	74.490	ENSPMGG00000010299	rnaseh2b	95	74.490	Periophthalmus_magnuspinnatus
ENSIPUG00000023815	rnaseh2b	87	52.045	ENSPEMG00000019721	Rnaseh2b	87	53.506	Peromyscus_maniculatus_bairdii
ENSIPUG00000023815	rnaseh2b	93	52.265	ENSPCIG00000014535	-	96	52.265	Phascolarctos_cinereus
ENSIPUG00000023815	rnaseh2b	100	70.550	ENSPFOG00000016722	rnaseh2b	100	70.550	Poecilia_formosa
ENSIPUG00000023815	rnaseh2b	100	70.684	ENSPLAG00000011755	rnaseh2b	100	70.684	Poecilia_latipinna
ENSIPUG00000023815	rnaseh2b	100	71.010	ENSPMEG00000002721	rnaseh2b	100	71.010	Poecilia_mexicana
ENSIPUG00000023815	rnaseh2b	100	71.010	ENSPREG00000007737	rnaseh2b	100	71.010	Poecilia_reticulata
ENSIPUG00000023815	rnaseh2b	88	52.190	ENSPPYG00000005378	RNASEH2B	87	52.190	Pongo_abelii
ENSIPUG00000023815	rnaseh2b	87	52.941	ENSPCOG00000026623	RNASEH2B	87	52.941	Propithecus_coquereli
ENSIPUG00000023815	rnaseh2b	76	51.489	ENSPVAG00000000508	RNASEH2B	88	51.489	Pteropus_vampyrus
ENSIPUG00000023815	rnaseh2b	100	71.987	ENSPNYG00000013552	rnaseh2b	100	71.987	Pundamilia_nyererei
ENSIPUG00000023815	rnaseh2b	99	85.574	ENSPNAG00000024825	rnaseh2b	99	85.574	Pygocentrus_nattereri
ENSIPUG00000023815	rnaseh2b	87	52.399	ENSRNOG00000009192	Rnaseh2b	87	52.399	Rattus_norvegicus
ENSIPUG00000023815	rnaseh2b	91	45.196	ENSRBIG00000036017	-	92	45.196	Rhinopithecus_bieti
ENSIPUG00000023815	rnaseh2b	88	52.030	ENSRBIG00000028928	-	87	52.030	Rhinopithecus_bieti
ENSIPUG00000023815	rnaseh2b	69	41.784	ENSRROG00000044915	-	79	42.381	Rhinopithecus_roxellana
ENSIPUG00000023815	rnaseh2b	88	52.030	ENSRROG00000018808	-	88	51.460	Rhinopithecus_roxellana
ENSIPUG00000023815	rnaseh2b	88	53.137	ENSSBOG00000008081	RNASEH2B	97	53.137	Saimiri_boliviensis_boliviensis
ENSIPUG00000023815	rnaseh2b	99	57.049	ENSSHAG00000016190	RNASEH2B	99	57.049	Sarcophilus_harrisii
ENSIPUG00000023815	rnaseh2b	99	72.787	ENSSFOG00015010190	rnaseh2b	99	72.787	Scleropages_formosus
ENSIPUG00000023815	rnaseh2b	100	73.290	ENSSMAG00000001546	rnaseh2b	100	73.290	Scophthalmus_maximus
ENSIPUG00000023815	rnaseh2b	100	74.919	ENSSDUG00000007567	rnaseh2b	100	74.919	Seriola_dumerili
ENSIPUG00000023815	rnaseh2b	100	72.727	ENSSLDG00000012485	rnaseh2b	100	72.727	Seriola_lalandi_dorsalis
ENSIPUG00000023815	rnaseh2b	85	53.817	ENSSPUG00000006745	-	94	53.817	Sphenodon_punctatus
ENSIPUG00000023815	rnaseh2b	100	72.964	ENSSPAG00000020926	rnaseh2b	100	72.964	Stegastes_partitus
ENSIPUG00000023815	rnaseh2b	88	52.206	ENSSSCG00000024385	RNASEH2B	97	53.600	Sus_scrofa
ENSIPUG00000023815	rnaseh2b	87	62.825	ENSTGUG00000012104	RNASEH2B	99	62.825	Taeniopygia_guttata
ENSIPUG00000023815	rnaseh2b	99	73.443	ENSTRUG00000015098	rnaseh2b	99	73.443	Takifugu_rubripes
ENSIPUG00000023815	rnaseh2b	100	71.845	ENSTNIG00000013861	rnaseh2b	100	71.845	Tetraodon_nigroviridis
ENSIPUG00000023815	rnaseh2b	86	45.725	ENSTTRG00000010761	RNASEH2B	87	47.037	Tursiops_truncatus
ENSIPUG00000023815	rnaseh2b	87	53.160	ENSUAMG00000022849	RNASEH2B	96	53.160	Ursus_americanus
ENSIPUG00000023815	rnaseh2b	87	52.416	ENSUMAG00000018556	RNASEH2B	96	52.416	Ursus_maritimus
ENSIPUG00000023815	rnaseh2b	86	53.731	ENSVPAG00000005679	RNASEH2B	92	53.731	Vicugna_pacos
ENSIPUG00000023815	rnaseh2b	88	52.222	ENSVVUG00000024015	RNASEH2B	81	53.333	Vulpes_vulpes
ENSIPUG00000023815	rnaseh2b	99	54.754	ENSXETG00000020720	rnaseh2b	99	54.754	Xenopus_tropicalis
ENSIPUG00000023815	rnaseh2b	100	68.506	ENSXCOG00000018732	rnaseh2b	100	68.506	Xiphophorus_couchianus
ENSIPUG00000023815	rnaseh2b	100	70.684	ENSXMAG00000022554	rnaseh2b	100	70.684	Xiphophorus_maculatus