EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000023921 (Gene tree)
Gene ID: 108255078
Gene Symbol: pusl1
Alias: -
Full Name: pseudouridine synthase like 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 20184 bases
Position: chr21:6075626-6095809
Accession: 108255078
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000035694	PseudoU_synth_1	PF01416.20	1.9e-33	1	2
ENSIPUP00000035694	PseudoU_synth_1	PF01416.20	1.9e-33	2	2
ENSIPUP00000035693	PseudoU_synth_1	PF01416.20	3.1e-27	1	2
ENSIPUP00000035693	PseudoU_synth_1	PF01416.20	3.1e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000037095	-	1095	XM_017450733	ENSIPUP00000035694	291 (aa)	XP_017306222	A0A2D0PI94
ENSIPUT00000037094	-	975	-	ENSIPUP00000035693	324 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000023921's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000023921's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000023921	pusl1	96	48.571	ENSG00000169972	PUSL1	98	43.200	Homo_sapiens
ENSIPUG00000023921	pusl1	98	61.538	ENSAPOG00000016290	pusl1	96	61.538	Acanthochromis_polyacanthus
ENSIPUG00000023921	pusl1	96	47.143	ENSAMEG00000013752	PUSL1	92	47.143	Ailuropoda_melanoleuca
ENSIPUG00000023921	pusl1	94	62.044	ENSACIG00000015240	pusl1	100	62.044	Amphilophus_citrinellus
ENSIPUG00000023921	pusl1	95	59.712	ENSAOCG00000019419	pusl1	83	59.712	Amphiprion_ocellaris
ENSIPUG00000023921	pusl1	98	60.140	ENSAPEG00000005452	pusl1	96	60.140	Amphiprion_percula
ENSIPUG00000023921	pusl1	96	66.308	ENSATEG00000024154	pusl1	93	66.308	Anabas_testudineus
ENSIPUG00000023921	pusl1	96	54.643	ENSAPLG00000004946	PUSL1	94	54.643	Anas_platyrhynchos
ENSIPUG00000023921	pusl1	89	54.054	ENSACAG00000014111	PUSL1	98	54.054	Anolis_carolinensis
ENSIPUG00000023921	pusl1	96	49.291	ENSANAG00000037456	PUSL1	92	49.291	Aotus_nancymaae
ENSIPUG00000023921	pusl1	96	64.875	ENSACLG00000008675	pusl1	93	64.875	Astatotilapia_calliptera
ENSIPUG00000023921	pusl1	97	75.972	ENSAMXG00000044007	pusl1	97	75.094	Astyanax_mexicanus
ENSIPUG00000023921	pusl1	97	49.117	ENSBTAG00000007619	PUSL1	97	49.117	Bos_taurus
ENSIPUG00000023921	pusl1	96	48.936	ENSCJAG00000010972	PUSL1	92	48.936	Callithrix_jacchus
ENSIPUG00000023921	pusl1	98	44.406	ENSCAFG00000019291	PUSL1	93	44.406	Canis_familiaris
ENSIPUG00000023921	pusl1	98	45.804	ENSCAFG00020011568	PUSL1	93	45.804	Canis_lupus_dingo
ENSIPUG00000023921	pusl1	97	48.763	ENSCHIG00000012615	PUSL1	98	48.763	Capra_hircus
ENSIPUG00000023921	pusl1	95	45.683	ENSCPOG00000005149	PUSL1	90	45.683	Cavia_porcellus
ENSIPUG00000023921	pusl1	98	48.432	ENSCCAG00000027475	PUSL1	92	48.936	Cebus_capucinus
ENSIPUG00000023921	pusl1	96	48.754	ENSCATG00000018260	PUSL1	92	48.754	Cercocebus_atys
ENSIPUG00000023921	pusl1	96	46.619	ENSCLAG00000005232	PUSL1	91	46.619	Chinchilla_lanigera
ENSIPUG00000023921	pusl1	96	48.227	ENSCSAG00000000680	PUSL1	92	48.227	Chlorocebus_sabaeus
ENSIPUG00000023921	pusl1	97	58.304	ENSCPBG00000022621	PUSL1	97	58.304	Chrysemys_picta_bellii
ENSIPUG00000023921	pusl1	96	47.687	ENSCANG00000034373	PUSL1	92	47.687	Colobus_angolensis_palliatus
ENSIPUG00000023921	pusl1	96	47.857	ENSCGRG00001012429	Pusl1	96	47.857	Cricetulus_griseus_chok1gshd
ENSIPUG00000023921	pusl1	96	47.500	ENSCGRG00000006466	Pusl1	96	47.500	Cricetulus_griseus_crigri
ENSIPUG00000023921	pusl1	98	62.718	ENSCSEG00000005159	pusl1	95	62.718	Cynoglossus_semilaevis
ENSIPUG00000023921	pusl1	81	52.521	ENSCVAG00000012923	pusl1	91	52.521	Cyprinodon_variegatus
ENSIPUG00000023921	pusl1	98	75.088	ENSDARG00000074565	pusl1	99	74.912	Danio_rerio
ENSIPUG00000023921	pusl1	95	32.353	FBgn0083976	CG34140	99	32.353	Drosophila_melanogaster
ENSIPUG00000023921	pusl1	96	47.857	ENSECAG00000006248	PUSL1	91	47.857	Equus_caballus
ENSIPUG00000023921	pusl1	94	45.520	ENSEEUG00000000837	PUSL1	93	45.520	Erinaceus_europaeus
ENSIPUG00000023921	pusl1	98	63.509	ENSELUG00000015945	pusl1	97	63.509	Esox_lucius
ENSIPUG00000023921	pusl1	96	47.331	ENSFCAG00000007617	PUSL1	93	47.331	Felis_catus
ENSIPUG00000023921	pusl1	96	65.714	ENSFHEG00000006370	pusl1	94	65.714	Fundulus_heteroclitus
ENSIPUG00000023921	pusl1	95	65.108	ENSGMOG00000019388	pusl1	99	65.108	Gadus_morhua
ENSIPUG00000023921	pusl1	98	57.343	ENSGALG00000001714	PUSL1	98	57.343	Gallus_gallus
ENSIPUG00000023921	pusl1	97	65.248	ENSGAFG00000007546	pusl1	96	65.248	Gambusia_affinis
ENSIPUG00000023921	pusl1	96	60.714	ENSGACG00000007848	pusl1	92	60.714	Gasterosteus_aculeatus
ENSIPUG00000023921	pusl1	97	56.184	ENSGAGG00000004730	PUSL1	97	56.184	Gopherus_agassizii
ENSIPUG00000023921	pusl1	83	48.148	ENSGGOG00000005364	PUSL1	97	45.059	Gorilla_gorilla
ENSIPUG00000023921	pusl1	96	65.233	ENSHBUG00000001264	pusl1	93	65.233	Haplochromis_burtoni
ENSIPUG00000023921	pusl1	96	45.035	ENSHGLG00000017570	PUSL1	91	45.035	Heterocephalus_glaber_female
ENSIPUG00000023921	pusl1	90	45.455	ENSHGLG00100007641	PUSL1	87	45.455	Heterocephalus_glaber_male
ENSIPUG00000023921	pusl1	95	61.957	ENSHCOG00000010077	pusl1	100	61.957	Hippocampus_comes
ENSIPUG00000023921	pusl1	95	47.312	ENSSTOG00000001783	PUSL1	89	45.361	Ictidomys_tridecemlineatus
ENSIPUG00000023921	pusl1	98	48.780	ENSJJAG00000020471	Pusl1	97	48.780	Jaculus_jaculus
ENSIPUG00000023921	pusl1	87	62.698	ENSKMAG00000005154	pusl1	86	62.698	Kryptolebias_marmoratus
ENSIPUG00000023921	pusl1	97	62.278	ENSLBEG00000013469	pusl1	97	62.278	Labrus_bergylta
ENSIPUG00000023921	pusl1	66	59.067	ENSLACG00000018795	PUSL1	95	59.067	Latimeria_chalumnae
ENSIPUG00000023921	pusl1	97	62.411	ENSLOCG00000002210	pusl1	96	62.324	Lepisosteus_oculatus
ENSIPUG00000023921	pusl1	89	47.126	ENSLAFG00000013685	PUSL1	97	47.126	Loxodonta_africana
ENSIPUG00000023921	pusl1	96	48.571	ENSMFAG00000046288	PUSL1	92	48.571	Macaca_fascicularis
ENSIPUG00000023921	pusl1	96	42.143	ENSMMUG00000016279	PUSL1	91	42.143	Macaca_mulatta
ENSIPUG00000023921	pusl1	96	49.110	ENSMNEG00000037989	PUSL1	92	49.110	Macaca_nemestrina
ENSIPUG00000023921	pusl1	96	65.000	ENSMAMG00000016538	pusl1	92	65.000	Mastacembelus_armatus
ENSIPUG00000023921	pusl1	96	64.875	ENSMZEG00005026990	pusl1	93	64.875	Maylandia_zebra
ENSIPUG00000023921	pusl1	97	56.537	ENSMGAG00000003037	PUSL1	96	56.537	Meleagris_gallopavo
ENSIPUG00000023921	pusl1	96	46.786	ENSMAUG00000019924	Pusl1	96	46.786	Mesocricetus_auratus
ENSIPUG00000023921	pusl1	98	48.084	ENSMICG00000014171	PUSL1	97	48.084	Microcebus_murinus
ENSIPUG00000023921	pusl1	96	48.214	ENSMOCG00000005602	Pusl1	96	48.214	Microtus_ochrogaster
ENSIPUG00000023921	pusl1	95	59.286	ENSMMOG00000003269	pusl1	100	59.286	Mola_mola
ENSIPUG00000023921	pusl1	98	61.806	ENSMALG00000021686	pusl1	94	61.806	Monopterus_albus
ENSIPUG00000023921	pusl1	96	48.399	MGP_CAROLIEiJ_G0026911	Pusl1	96	48.399	Mus_caroli
ENSIPUG00000023921	pusl1	96	47.331	ENSMUSG00000051557	Pusl1	96	47.331	Mus_musculus
ENSIPUG00000023921	pusl1	96	49.110	MGP_PahariEiJ_G0029260	Pusl1	96	49.110	Mus_pahari
ENSIPUG00000023921	pusl1	96	48.043	MGP_SPRETEiJ_G0027906	Pusl1	96	48.043	Mus_spretus
ENSIPUG00000023921	pusl1	95	48.387	ENSMPUG00000014313	PUSL1	91	48.387	Mustela_putorius_furo
ENSIPUG00000023921	pusl1	96	47.687	ENSNGAG00000004647	Pusl1	84	47.687	Nannospalax_galili
ENSIPUG00000023921	pusl1	87	60.392	ENSNBRG00000014762	pusl1	93	60.392	Neolamprologus_brichardi
ENSIPUG00000023921	pusl1	85	50.602	ENSNLEG00000000051	PUSL1	90	50.602	Nomascus_leucogenys
ENSIPUG00000023921	pusl1	95	48.746	ENSMEUG00000011649	-	98	48.746	Notamacropus_eugenii
ENSIPUG00000023921	pusl1	94	39.636	ENSMEUG00000005176	-	99	39.636	Notamacropus_eugenii
ENSIPUG00000023921	pusl1	97	47.887	ENSODEG00000008247	PUSL1	91	47.887	Octodon_degus
ENSIPUG00000023921	pusl1	96	65.233	ENSONIG00000019361	pusl1	92	65.233	Oreochromis_niloticus
ENSIPUG00000023921	pusl1	95	62.950	ENSORLG00000016228	pusl1	94	62.950	Oryzias_latipes
ENSIPUG00000023921	pusl1	95	63.309	ENSORLG00020013710	pusl1	94	63.309	Oryzias_latipes_hni
ENSIPUG00000023921	pusl1	95	61.957	ENSORLG00015008715	pusl1	97	61.957	Oryzias_latipes_hsok
ENSIPUG00000023921	pusl1	95	64.029	ENSOMEG00000018897	pusl1	96	64.029	Oryzias_melastigma
ENSIPUG00000023921	pusl1	96	48.929	ENSOGAG00000031692	PUSL1	97	48.929	Otolemur_garnettii
ENSIPUG00000023921	pusl1	89	48.473	ENSOARG00000004905	PUSL1	98	48.473	Ovis_aries
ENSIPUG00000023921	pusl1	96	48.754	ENSPPAG00000029283	PUSL1	92	48.754	Pan_paniscus
ENSIPUG00000023921	pusl1	99	47.241	ENSPPRG00000023329	PUSL1	95	47.241	Panthera_pardus
ENSIPUG00000023921	pusl1	89	47.328	ENSPTIG00000018532	PUSL1	96	47.328	Panthera_tigris_altaica
ENSIPUG00000023921	pusl1	96	49.110	ENSPTRG00000000021	PUSL1	92	49.110	Pan_troglodytes
ENSIPUG00000023921	pusl1	96	48.571	ENSPANG00000000591	PUSL1	92	48.571	Papio_anubis
ENSIPUG00000023921	pusl1	95	72.043	ENSPKIG00000002447	pusl1	96	72.043	Paramormyrops_kingsleyae
ENSIPUG00000023921	pusl1	90	57.034	ENSPSIG00000002781	PUSL1	97	57.034	Pelodiscus_sinensis
ENSIPUG00000023921	pusl1	95	60.870	ENSPMGG00000011051	pusl1	99	60.870	Periophthalmus_magnuspinnatus
ENSIPUG00000023921	pusl1	96	47.857	ENSPEMG00000013541	Pusl1	96	47.857	Peromyscus_maniculatus_bairdii
ENSIPUG00000023921	pusl1	97	48.070	ENSPCIG00000007816	-	65	48.070	Phascolarctos_cinereus
ENSIPUG00000023921	pusl1	96	65.950	ENSPFOG00000015448	pusl1	92	65.950	Poecilia_formosa
ENSIPUG00000023921	pusl1	95	66.547	ENSPLAG00000004348	pusl1	94	66.547	Poecilia_latipinna
ENSIPUG00000023921	pusl1	95	66.547	ENSPMEG00000000931	pusl1	94	66.547	Poecilia_mexicana
ENSIPUG00000023921	pusl1	96	65.591	ENSPREG00000002324	pusl1	94	65.591	Poecilia_reticulata
ENSIPUG00000023921	pusl1	84	47.347	ENSPPYG00000002014	PUSL1	87	47.347	Pongo_abelii
ENSIPUG00000023921	pusl1	64	47.619	ENSPCAG00000002272	PUSL1	77	47.619	Procavia_capensis
ENSIPUG00000023921	pusl1	70	55.405	ENSPVAG00000001016	PUSL1	67	55.405	Pteropus_vampyrus
ENSIPUG00000023921	pusl1	80	66.383	ENSPNYG00000006588	pusl1	98	66.383	Pundamilia_nyererei
ENSIPUG00000023921	pusl1	99	80.969	ENSPNAG00000024441	pusl1	99	80.969	Pygocentrus_nattereri
ENSIPUG00000023921	pusl1	96	48.399	ENSRNOG00000022354	Pusl1	96	48.399	Rattus_norvegicus
ENSIPUG00000023921	pusl1	96	47.500	ENSRBIG00000036842	PUSL1	92	47.500	Rhinopithecus_bieti
ENSIPUG00000023921	pusl1	96	47.500	ENSRROG00000030704	PUSL1	92	47.500	Rhinopithecus_roxellana
ENSIPUG00000023921	pusl1	90	47.727	ENSSBOG00000032249	PUSL1	95	47.727	Saimiri_boliviensis_boliviensis
ENSIPUG00000023921	pusl1	52	49.333	ENSSHAG00000004840	-	86	46.108	Sarcophilus_harrisii
ENSIPUG00000023921	pusl1	95	68.705	ENSSFOG00015008281	pusl1	91	68.705	Scleropages_formosus
ENSIPUG00000023921	pusl1	97	62.766	ENSSMAG00000007187	pusl1	93	62.766	Scophthalmus_maximus
ENSIPUG00000023921	pusl1	97	64.539	ENSSDUG00000000287	pusl1	94	60.072	Seriola_dumerili
ENSIPUG00000023921	pusl1	97	64.894	ENSSLDG00000009605	pusl1	90	64.894	Seriola_lalandi_dorsalis
ENSIPUG00000023921	pusl1	62	48.603	ENSSARG00000005323	-	94	48.603	Sorex_araneus
ENSIPUG00000023921	pusl1	94	54.745	ENSSPAG00000002528	pusl1	100	54.745	Stegastes_partitus
ENSIPUG00000023921	pusl1	97	47.535	ENSSSCG00000003338	PUSL1	92	47.535	Sus_scrofa
ENSIPUG00000023921	pusl1	93	53.846	ENSTGUG00000003214	PUSL1	98	52.878	Taeniopygia_guttata
ENSIPUG00000023921	pusl1	96	61.786	ENSTRUG00000010102	pusl1	94	61.786	Takifugu_rubripes
ENSIPUG00000023921	pusl1	62	55.249	ENSTNIG00000005789	pusl1	82	55.249	Tetraodon_nigroviridis
ENSIPUG00000023921	pusl1	58	45.294	ENSTBEG00000005001	PUSL1	70	45.294	Tupaia_belangeri
ENSIPUG00000023921	pusl1	95	41.786	ENSTTRG00000017030	PUSL1	94	41.463	Tursiops_truncatus
ENSIPUG00000023921	pusl1	83	46.914	ENSUAMG00000012801	PUSL1	80	46.914	Ursus_americanus
ENSIPUG00000023921	pusl1	83	47.325	ENSUMAG00000002084	PUSL1	80	47.325	Ursus_maritimus
ENSIPUG00000023921	pusl1	96	46.263	ENSVVUG00000004320	PUSL1	94	40.308	Vulpes_vulpes
ENSIPUG00000023921	pusl1	78	53.304	ENSXETG00000011145	pusl1	99	53.304	Xenopus_tropicalis
ENSIPUG00000023921	pusl1	95	61.455	ENSXCOG00000017748	pusl1	97	61.455	Xiphophorus_couchianus
ENSIPUG00000023921	pusl1	96	66.667	ENSXMAG00000018846	pusl1	94	66.667	Xiphophorus_maculatus