EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000024004 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 1585 bases
Position: chr21:6573003-6574587
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000035812	zf-C2H2	PF00096.26	1e-09	1	2
ENSIPUP00000035812	zf-C2H2	PF00096.26	1e-09	2	2
ENSIPUP00000035812	zf-met	PF12874.7	7.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000037223	-	672	-	ENSIPUP00000035812	223 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000024004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000024004's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000024004	-	79	36.170	ENSIPUG00000005733	-	66	36.170
ENSIPUG00000024004	-	93	32.716	ENSIPUG00000005581	-	85	32.716
ENSIPUG00000024004	-	89	35.393	ENSIPUG00000021441	-	92	35.393
ENSIPUG00000024004	-	79	31.765	ENSIPUG00000015177	-	56	31.667
ENSIPUG00000024004	-	79	33.750	ENSIPUG00000015233	-	57	33.750
ENSIPUG00000024004	-	93	34.574	ENSIPUG00000015468	-	87	34.574
ENSIPUG00000024004	-	83	44.444	ENSIPUG00000007076	-	64	32.749
ENSIPUG00000024004	-	86	36.207	ENSIPUG00000023688	-	98	34.104
ENSIPUG00000024004	-	91	33.889	ENSIPUG00000019205	-	67	33.889
ENSIPUG00000024004	-	76	32.692	ENSIPUG00000011652	znf648	81	32.692
ENSIPUG00000024004	-	90	31.111	ENSIPUG00000021515	-	87	31.111
ENSIPUG00000024004	-	80	33.065	ENSIPUG00000013065	-	93	34.545
ENSIPUG00000024004	-	83	32.143	ENSIPUG00000007934	-	90	32.143
ENSIPUG00000024004	-	77	35.556	ENSIPUG00000022266	ZNF135	58	35.556
ENSIPUG00000024004	-	83	34.615	ENSIPUG00000015400	-	78	34.615
ENSIPUG00000024004	-	76	54.348	ENSIPUG00000011073	-	97	34.302
ENSIPUG00000024004	-	87	31.844	ENSIPUG00000004428	-	71	31.844
ENSIPUG00000024004	-	79	33.129	ENSIPUG00000015203	-	54	33.129
ENSIPUG00000024004	-	93	35.227	ENSIPUG00000021472	-	77	35.227
ENSIPUG00000024004	-	80	32.000	ENSIPUG00000001248	prdm5	72	32.000
ENSIPUG00000024004	-	99	34.940	ENSIPUG00000023635	-	92	33.918
ENSIPUG00000024004	-	80	33.333	ENSIPUG00000002655	-	99	33.333
ENSIPUG00000024004	-	75	32.258	ENSIPUG00000023761	-	59	32.258
ENSIPUG00000024004	-	80	33.533	ENSIPUG00000006916	-	79	33.533
ENSIPUG00000024004	-	84	35.106	ENSIPUG00000016075	-	95	35.106
ENSIPUG00000024004	-	86	33.333	ENSIPUG00000022751	-	94	31.720
ENSIPUG00000024004	-	91	31.111	ENSIPUG00000021556	-	87	31.111
ENSIPUG00000024004	-	88	33.133	ENSIPUG00000009750	-	87	33.133
ENSIPUG00000024004	-	82	31.915	ENSIPUG00000006936	-	73	35.260
ENSIPUG00000024004	-	80	31.694	ENSIPUG00000001941	-	82	31.694
ENSIPUG00000024004	-	73	39.759	ENSIPUG00000016009	znf596	61	37.576
ENSIPUG00000024004	-	76	34.682	ENSIPUG00000021998	-	90	34.682
ENSIPUG00000024004	-	80	33.333	ENSIPUG00000013315	-	93	33.333
ENSIPUG00000024004	-	82	35.152	ENSIPUG00000022741	-	79	36.810
ENSIPUG00000024004	-	68	31.333	ENSIPUG00000005547	-	51	31.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000024004	-	83	45.763	ENSAPOG00000019138	-	59	45.763	Acanthochromis_polyacanthus
ENSIPUG00000024004	-	78	33.702	ENSACIG00000007464	-	53	33.702	Amphilophus_citrinellus
ENSIPUG00000024004	-	83	32.075	ENSAOCG00000016897	-	67	32.075	Amphiprion_ocellaris
ENSIPUG00000024004	-	92	31.953	ENSAPEG00000010013	-	56	30.366	Amphiprion_percula
ENSIPUG00000024004	-	83	30.968	ENSAPEG00000001556	-	67	30.968	Amphiprion_percula
ENSIPUG00000024004	-	77	42.105	ENSCVAG00000003250	-	63	42.105	Cyprinodon_variegatus
ENSIPUG00000024004	-	78	35.714	ENSCVAG00000020141	-	82	35.714	Cyprinodon_variegatus
ENSIPUG00000024004	-	88	31.325	ENSELUG00000020882	-	53	31.325	Esox_lucius
ENSIPUG00000024004	-	74	31.206	ENSGAFG00000008204	-	63	31.206	Gambusia_affinis
ENSIPUG00000024004	-	80	43.284	ENSHCOG00000001873	-	55	33.533	Hippocampus_comes
ENSIPUG00000024004	-	78	35.676	ENSHCOG00000015497	-	74	35.676	Hippocampus_comes
ENSIPUG00000024004	-	84	34.810	ENSHCOG00000013489	-	82	34.810	Hippocampus_comes
ENSIPUG00000024004	-	80	43.284	ENSHCOG00000008550	-	55	33.533	Hippocampus_comes
ENSIPUG00000024004	-	85	30.769	ENSLBEG00000011210	-	52	30.769	Labrus_bergylta
ENSIPUG00000024004	-	74	34.320	ENSLBEG00000007106	-	52	34.320	Labrus_bergylta
ENSIPUG00000024004	-	92	33.140	ENSLOCG00000004208	-	95	33.140	Lepisosteus_oculatus
ENSIPUG00000024004	-	76	33.158	ENSMALG00000004279	-	63	31.214	Monopterus_albus
ENSIPUG00000024004	-	85	33.735	ENSONIG00000007967	-	54	31.579	Oreochromis_niloticus
ENSIPUG00000024004	-	80	33.750	ENSORLG00000002268	-	81	33.750	Oryzias_latipes
ENSIPUG00000024004	-	71	40.678	ENSORLG00000021885	-	59	34.177	Oryzias_latipes
ENSIPUG00000024004	-	79	39.560	ENSORLG00020018921	-	70	39.560	Oryzias_latipes_hni
ENSIPUG00000024004	-	71	34.568	ENSORLG00015018099	-	61	41.071	Oryzias_latipes_hsok
ENSIPUG00000024004	-	79	37.500	ENSPMGG00000009571	-	76	37.500	Periophthalmus_magnuspinnatus
ENSIPUG00000024004	-	86	33.987	ENSPMGG00000002661	-	74	33.987	Periophthalmus_magnuspinnatus
ENSIPUG00000024004	-	84	33.094	ENSPFOG00000009491	-	55	31.000	Poecilia_formosa
ENSIPUG00000024004	-	92	34.104	ENSPFOG00000018860	-	99	34.104	Poecilia_formosa
ENSIPUG00000024004	-	81	34.104	ENSPLAG00000008941	-	78	34.104	Poecilia_latipinna
ENSIPUG00000024004	-	74	36.232	ENSPLAG00000014832	-	74	36.232	Poecilia_latipinna
ENSIPUG00000024004	-	84	33.094	ENSPMEG00000024117	-	55	31.000	Poecilia_mexicana
ENSIPUG00000024004	-	74	36.232	ENSPMEG00000005210	-	74	36.232	Poecilia_mexicana
ENSIPUG00000024004	-	92	31.361	ENSSPAG00000011544	-	51	31.361	Stegastes_partitus
ENSIPUG00000024004	-	78	31.646	ENSSPAG00000011533	-	78	31.646	Stegastes_partitus
ENSIPUG00000024004	-	84	32.903	ENSXCOG00000003441	-	56	32.903	Xiphophorus_couchianus
ENSIPUG00000024004	-	74	36.232	ENSXMAG00000012936	-	75	36.232	Xiphophorus_maculatus