EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000024007 (Gene tree)
Gene ID: 108280969
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 37-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 2229 bases
Position: chr21:6577918-6580146
Accession: 108280969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000035814	zf-C2H2	PF00096.26	2.1e-17	1	4
ENSIPUP00000035814	zf-C2H2	PF00096.26	2.1e-17	2	4
ENSIPUP00000035814	zf-C2H2	PF00096.26	2.1e-17	3	4
ENSIPUP00000035814	zf-C2H2	PF00096.26	2.1e-17	4	4
ENSIPUP00000035814	zf-met	PF12874.7	6.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000037225	-	1002	XM_017496466	ENSIPUP00000035814	310 (aa)	XP_017351955	A0A2D0TBA4

Gene Model

Click here to download ENSIPUG00000024007's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000024007's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000024007	-	51	35.294	ENSIPUG00000011652	znf648	74	42.718
ENSIPUG00000024007	-	52	48.649	ENSIPUG00000016075	-	94	45.977
ENSIPUG00000024007	-	50	42.727	ENSIPUG00000021556	-	88	42.727
ENSIPUG00000024007	-	53	36.937	ENSIPUG00000009577	-	56	36.937
ENSIPUG00000024007	-	51	40.506	ENSIPUG00000003040	zbtb47a	76	40.506
ENSIPUG00000024007	-	51	41.818	ENSIPUG00000001248	prdm5	74	39.496
ENSIPUG00000024007	-	53	38.272	ENSIPUG00000011258	-	68	38.272
ENSIPUG00000024007	-	98	33.022	ENSIPUG00000024011	-	97	33.022
ENSIPUG00000024007	-	91	44.681	ENSIPUG00000005775	si:dkey-14d8.1	61	44.681
ENSIPUG00000024007	-	53	45.614	ENSIPUG00000006936	-	87	45.614
ENSIPUG00000024007	-	57	40.367	ENSIPUG00000023635	-	94	44.737
ENSIPUG00000024007	-	55	41.228	ENSIPUG00000015294	-	51	41.228
ENSIPUG00000024007	-	97	40.076	ENSIPUG00000024008	-	95	40.076
ENSIPUG00000024007	-	54	43.925	ENSIPUG00000015121	-	61	43.925
ENSIPUG00000024007	-	57	41.228	ENSIPUG00000022741	-	94	41.228

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000024007	-	53	49.123	ENSAPOG00000021496	-	94	49.123	Acanthochromis_polyacanthus
ENSIPUG00000024007	-	96	49.123	ENSAPEG00000010478	-	93	49.123	Amphiprion_percula
ENSIPUG00000024007	-	96	47.706	ENSATEG00000024549	-	97	47.706	Anabas_testudineus
ENSIPUG00000024007	-	98	37.425	ENSAMXG00000035090	-	97	37.425	Astyanax_mexicanus
ENSIPUG00000024007	-	98	33.333	ENSAMXG00000037699	-	93	33.129	Astyanax_mexicanus
ENSIPUG00000024007	-	98	39.640	ENSCVAG00000004508	-	99	39.640	Cyprinodon_variegatus
ENSIPUG00000024007	-	98	43.220	ENSELUG00000008171	-	100	43.220	Esox_lucius
ENSIPUG00000024007	-	53	42.373	ENSHBUG00000002878	-	59	42.373	Haplochromis_burtoni
ENSIPUG00000024007	-	98	40.217	ENSLBEG00000011006	-	97	40.217	Labrus_bergylta
ENSIPUG00000024007	-	96	38.462	ENSNBRG00000013838	-	98	38.462	Neolamprologus_brichardi
ENSIPUG00000024007	-	65	39.831	ENSORLG00000025719	-	87	39.831	Oryzias_latipes
ENSIPUG00000024007	-	96	42.529	ENSPFOG00000012948	-	96	42.529	Poecilia_formosa
ENSIPUG00000024007	-	65	42.391	ENSPNYG00000019187	-	70	41.958	Pundamilia_nyererei
ENSIPUG00000024007	-	53	42.373	ENSPNYG00000023882	-	73	42.373	Pundamilia_nyererei
ENSIPUG00000024007	-	55	40.187	ENSPNYG00000007907	-	55	40.187	Pundamilia_nyererei
ENSIPUG00000024007	-	55	45.679	ENSSLDG00000007568	-	78	45.679	Seriola_lalandi_dorsalis
ENSIPUG00000024007	-	96	49.123	ENSSPAG00000010524	-	96	49.123	Stegastes_partitus
ENSIPUG00000024007	-	71	43.220	ENSSPAG00000021940	-	53	43.220	Stegastes_partitus
ENSIPUG00000024007	-	94	41.228	ENSXETG00000002690	-	94	41.228	Xenopus_tropicalis