EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000024008 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 6262 bases
Position: chr21:6581378-6587639
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000035816	zf-C2H2	PF00096.26	2.2e-11	1	1
ENSIPUP00000035816	zf-met	PF12874.7	2.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000037227	-	3693	-	ENSIPUP00000035816	419 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000024008's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000024008's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000024008	-	66	47.561	ENSIPUG00000023635	-	95	50.000
ENSIPUG00000024008	-	95	40.076	ENSIPUG00000024007	-	97	40.076
ENSIPUG00000024008	-	67	44.144	ENSIPUG00000022751	-	97	45.455
ENSIPUG00000024008	-	95	37.063	ENSIPUG00000024011	-	98	37.063

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000024008	-	98	41.000	ENSAPEG00000005566	-	99	41.000	Amphiprion_percula
ENSIPUG00000024008	-	95	42.857	ENSATEG00000008771	-	92	42.857	Anabas_testudineus
ENSIPUG00000024008	-	67	46.667	ENSAMXG00000035875	-	99	46.667	Astyanax_mexicanus
ENSIPUG00000024008	-	67	47.200	ENSAMXG00000036567	-	74	47.200	Astyanax_mexicanus
ENSIPUG00000024008	-	50	55.238	ENSAMXG00000032446	-	92	43.878	Astyanax_mexicanus
ENSIPUG00000024008	-	67	48.000	ENSAMXG00000041865	-	96	48.000	Astyanax_mexicanus
ENSIPUG00000024008	-	67	48.800	ENSAMXG00000039744	-	92	48.800	Astyanax_mexicanus
ENSIPUG00000024008	-	67	46.341	ENSAMXG00000030742	-	98	46.341	Astyanax_mexicanus
ENSIPUG00000024008	-	65	45.690	ENSCSEG00000003757	-	99	50.685	Cynoglossus_semilaevis
ENSIPUG00000024008	-	94	35.922	ENSCVAG00000007073	-	88	35.922	Cyprinodon_variegatus
ENSIPUG00000024008	-	96	40.336	ENSELUG00000016397	-	78	40.336	Esox_lucius
ENSIPUG00000024008	-	55	37.719	ENSELUG00000013245	-	87	47.761	Esox_lucius
ENSIPUG00000024008	-	90	42.188	ENSHCOG00000001448	-	96	42.188	Hippocampus_comes
ENSIPUG00000024008	-	61	42.857	ENSMAMG00000022145	-	61	45.161	Mastacembelus_armatus
ENSIPUG00000024008	-	61	44.800	ENSMZEG00005025726	-	89	44.800	Maylandia_zebra
ENSIPUG00000024008	-	95	47.500	ENSONIG00000016734	-	95	47.500	Oreochromis_niloticus
ENSIPUG00000024008	-	66	47.581	ENSONIG00000020719	-	97	47.581	Oreochromis_niloticus
ENSIPUG00000024008	-	94	44.444	ENSOMEG00000020943	-	89	44.444	Oryzias_melastigma
ENSIPUG00000024008	-	56	52.778	ENSPMGG00000011473	-	92	48.148	Periophthalmus_magnuspinnatus
ENSIPUG00000024008	-	88	48.077	ENSPNAG00000011679	-	97	48.077	Pygocentrus_nattereri
ENSIPUG00000024008	-	67	44.262	ENSRNOG00000024056	Zfp17	83	44.262	Rattus_norvegicus
ENSIPUG00000024008	-	63	46.512	ENSSLDG00000016317	-	92	46.512	Seriola_lalandi_dorsalis
ENSIPUG00000024008	-	69	43.548	ENSXETG00000023643	znf484	99	43.548	Xenopus_tropicalis
ENSIPUG00000024008	-	52	42.574	ENSXCOG00000009668	-	92	42.574	Xiphophorus_couchianus
ENSIPUG00000024008	-	78	45.370	ENSXMAG00000026477	-	88	45.370	Xiphophorus_maculatus