EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000024020 (Gene tree)
Gene ID: 108259898
Gene Symbol: SYMPK
Alias: si:dkeyp-117b8.1
Full Name: symplekin
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 13988 bases
Position: chr28:4542279-4556266
Accession: 108259898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000035840	Symplekin_C	PF12295.8	4.7e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000037251	-	5336	XM_017459690	ENSIPUP00000035840	1239 (aa)	XP_017315179	W5U6I2

Gene Model

Click here to download ENSIPUG00000024020's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03015	mRNA surveillance pathway	KEGG
ipu04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000024020's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000024020	SYMPK	90	73.925	ENSG00000125755	SYMPK	100	73.239	Homo_sapiens
ENSIPUG00000024020	SYMPK	87	84.381	ENSAPOG00000015934	sympk	98	81.467	Acanthochromis_polyacanthus
ENSIPUG00000024020	SYMPK	89	74.503	ENSAMEG00000000680	SYMPK	86	74.569	Ailuropoda_melanoleuca
ENSIPUG00000024020	SYMPK	87	82.825	ENSACIG00000006357	sympk	91	82.621	Amphilophus_citrinellus
ENSIPUG00000024020	SYMPK	94	79.897	ENSAOCG00000024124	sympk	91	83.736	Amphiprion_ocellaris
ENSIPUG00000024020	SYMPK	94	79.812	ENSAPEG00000003465	sympk	98	77.878	Amphiprion_percula
ENSIPUG00000024020	SYMPK	98	78.115	ENSATEG00000008472	sympk	88	84.211	Anabas_testudineus
ENSIPUG00000024020	SYMPK	80	74.297	ENSACAG00000004126	SYMPK	83	74.297	Anolis_carolinensis
ENSIPUG00000024020	SYMPK	90	74.283	ENSANAG00000021087	SYMPK	99	74.390	Aotus_nancymaae
ENSIPUG00000024020	SYMPK	88	83.532	ENSACLG00000001813	sympk	98	77.887	Astatotilapia_calliptera
ENSIPUG00000024020	SYMPK	95	87.004	ENSAMXG00000013677	sympk	97	86.751	Astyanax_mexicanus
ENSIPUG00000024020	SYMPK	90	73.746	ENSBTAG00000012101	SYMPK	87	73.807	Bos_taurus
ENSIPUG00000024020	SYMPK	90	74.373	ENSCJAG00000012172	SYMPK	99	72.983	Callithrix_jacchus
ENSIPUG00000024020	SYMPK	90	74.283	ENSCAFG00000004376	SYMPK	87	74.347	Canis_familiaris
ENSIPUG00000024020	SYMPK	90	74.283	ENSCAFG00020001815	SYMPK	87	74.347	Canis_lupus_dingo
ENSIPUG00000024020	SYMPK	90	73.746	ENSCHIG00000026784	SYMPK	87	73.897	Capra_hircus
ENSIPUG00000024020	SYMPK	90	73.482	ENSTSYG00000006268	SYMPK	95	72.914	Carlito_syrichta
ENSIPUG00000024020	SYMPK	86	72.067	ENSCAPG00000005112	SYMPK	96	72.067	Cavia_aperea
ENSIPUG00000024020	SYMPK	90	74.194	ENSCPOG00000010434	SYMPK	88	74.257	Cavia_porcellus
ENSIPUG00000024020	SYMPK	90	74.283	ENSCCAG00000036309	SYMPK	99	74.188	Cebus_capucinus
ENSIPUG00000024020	SYMPK	91	73.345	ENSCATG00000045107	SYMPK	99	73.885	Cercocebus_atys
ENSIPUG00000024020	SYMPK	90	74.104	ENSCLAG00000001206	SYMPK	87	74.167	Chinchilla_lanigera
ENSIPUG00000024020	SYMPK	90	74.014	ENSCSAG00000003115	SYMPK	87	74.077	Chlorocebus_sabaeus
ENSIPUG00000024020	SYMPK	71	88.136	ENSCHOG00000012456	SYMPK	81	88.136	Choloepus_hoffmanni
ENSIPUG00000024020	SYMPK	89	74.304	ENSCPBG00000007170	SYMPK	88	74.304	Chrysemys_picta_bellii
ENSIPUG00000024020	SYMPK	88	47.806	ENSCING00000021232	-	96	48.920	Ciona_intestinalis
ENSIPUG00000024020	SYMPK	84	47.834	ENSCSAVG00000005154	-	100	48.311	Ciona_savignyi
ENSIPUG00000024020	SYMPK	95	69.773	ENSCANG00000040907	SYMPK	99	72.029	Colobus_angolensis_palliatus
ENSIPUG00000024020	SYMPK	88	68.309	ENSCGRG00001010086	Sympk	84	75.425	Cricetulus_griseus_chok1gshd
ENSIPUG00000024020	SYMPK	88	82.844	ENSCSEG00000016802	sympk	89	82.844	Cynoglossus_semilaevis
ENSIPUG00000024020	SYMPK	97	79.689	ENSDARG00000059553	sympk	99	77.858	Danio_rerio
ENSIPUG00000024020	SYMPK	90	74.104	ENSDNOG00000016149	SYMPK	86	74.167	Dasypus_novemcinctus
ENSIPUG00000024020	SYMPK	89	36.356	FBgn0037371	Sym	95	36.444	Drosophila_melanogaster
ENSIPUG00000024020	SYMPK	70	59.459	ENSEBUG00000000387	sympk	88	60.677	Eptatretus_burgeri
ENSIPUG00000024020	SYMPK	90	74.373	ENSEASG00005014227	SYMPK	87	74.437	Equus_asinus_asinus
ENSIPUG00000024020	SYMPK	90	74.373	ENSECAG00000008163	SYMPK	87	74.437	Equus_caballus
ENSIPUG00000024020	SYMPK	71	74.652	ENSEEUG00000000270	-	81	74.652	Erinaceus_europaeus
ENSIPUG00000024020	SYMPK	90	83.049	ENSELUG00000000850	sympk	99	77.075	Esox_lucius
ENSIPUG00000024020	SYMPK	90	74.283	ENSFCAG00000007337	SYMPK	87	74.347	Felis_catus
ENSIPUG00000024020	SYMPK	90	74.014	ENSFDAG00000011272	SYMPK	87	74.077	Fukomys_damarensis
ENSIPUG00000024020	SYMPK	88	81.810	ENSFHEG00000010274	sympk	89	81.893	Fundulus_heteroclitus
ENSIPUG00000024020	SYMPK	87	79.795	ENSGMOG00000002357	sympk	99	79.888	Gadus_morhua
ENSIPUG00000024020	SYMPK	88	81.627	ENSGAFG00000010976	sympk	89	81.801	Gambusia_affinis
ENSIPUG00000024020	SYMPK	88	82.385	ENSGACG00000002735	sympk	97	82.472	Gasterosteus_aculeatus
ENSIPUG00000024020	SYMPK	56	73.247	ENSGAGG00000012538	-	88	72.163	Gopherus_agassizii
ENSIPUG00000024020	SYMPK	90	73.925	ENSGGOG00000003410	SYMPK	97	73.538	Gorilla_gorilla
ENSIPUG00000024020	SYMPK	88	83.440	ENSHBUG00000023564	sympk	98	77.805	Haplochromis_burtoni
ENSIPUG00000024020	SYMPK	90	69.982	ENSHGLG00000005228	SYMPK	86	70.027	Heterocephalus_glaber_female
ENSIPUG00000024020	SYMPK	99	68.442	ENSHGLG00100018571	SYMPK	89	74.257	Heterocephalus_glaber_male
ENSIPUG00000024020	SYMPK	87	76.980	ENSHCOG00000017400	sympk	89	77.273	Hippocampus_comes
ENSIPUG00000024020	SYMPK	90	74.462	ENSSTOG00000001534	SYMPK	87	74.527	Ictidomys_tridecemlineatus
ENSIPUG00000024020	SYMPK	90	74.194	ENSJJAG00000006633	Sympk	99	67.030	Jaculus_jaculus
ENSIPUG00000024020	SYMPK	88	83.516	ENSKMAG00000016292	sympk	98	77.414	Kryptolebias_marmoratus
ENSIPUG00000024020	SYMPK	88	83.410	ENSLBEG00000027913	sympk	95	80.021	Labrus_bergylta
ENSIPUG00000024020	SYMPK	89	70.172	ENSLACG00000016497	SYMPK	91	70.082	Latimeria_chalumnae
ENSIPUG00000024020	SYMPK	90	74.642	ENSLAFG00000008726	SYMPK	87	74.707	Loxodonta_africana
ENSIPUG00000024020	SYMPK	90	74.014	ENSMMUG00000015428	SYMPK	93	73.461	Macaca_mulatta
ENSIPUG00000024020	SYMPK	90	74.014	ENSMNEG00000019439	SYMPK	99	73.885	Macaca_nemestrina
ENSIPUG00000024020	SYMPK	90	74.014	ENSMLEG00000040508	SYMPK	99	73.885	Mandrillus_leucophaeus
ENSIPUG00000024020	SYMPK	94	79.760	ENSMAMG00000010486	sympk	89	83.841	Mastacembelus_armatus
ENSIPUG00000024020	SYMPK	88	83.532	ENSMZEG00005014146	sympk	98	77.887	Maylandia_zebra
ENSIPUG00000024020	SYMPK	90	72.582	ENSMAUG00000015657	Sympk	94	68.983	Mesocricetus_auratus
ENSIPUG00000024020	SYMPK	90	73.566	ENSMICG00000001871	SYMPK	92	71.708	Microcebus_murinus
ENSIPUG00000024020	SYMPK	95	69.572	ENSMOCG00000008388	Sympk	86	74.077	Microtus_ochrogaster
ENSIPUG00000024020	SYMPK	95	76.740	ENSMMOG00000019227	sympk	93	80.699	Mola_mola
ENSIPUG00000024020	SYMPK	89	75.023	ENSMODG00000021534	SYMPK	86	75.023	Monodelphis_domestica
ENSIPUG00000024020	SYMPK	76	77.883	ENSMALG00000008347	sympk	97	78.512	Monopterus_albus
ENSIPUG00000024020	SYMPK	95	69.630	MGP_CAROLIEiJ_G0029267	Sympk	77	88.073	Mus_caroli
ENSIPUG00000024020	SYMPK	95	69.174	ENSMUSG00000023118	Sympk	76	88.073	Mus_musculus
ENSIPUG00000024020	SYMPK	95	69.942	MGP_PahariEiJ_G0021127	Sympk	77	88.073	Mus_pahari
ENSIPUG00000024020	SYMPK	95	69.547	MGP_SPRETEiJ_G0030351	-	77	88.073	Mus_spretus
ENSIPUG00000024020	SYMPK	90	72.980	ENSMPUG00000005505	SYMPK	86	73.039	Mustela_putorius_furo
ENSIPUG00000024020	SYMPK	72	72.840	ENSMLUG00000001359	SYMPK	88	72.912	Myotis_lucifugus
ENSIPUG00000024020	SYMPK	90	74.104	ENSNGAG00000000820	Sympk	87	74.167	Nannospalax_galili
ENSIPUG00000024020	SYMPK	90	81.166	ENSNBRG00000018101	sympk	91	83.966	Neolamprologus_brichardi
ENSIPUG00000024020	SYMPK	90	63.839	ENSNLEG00000002369	SYMPK	86	64.273	Nomascus_leucogenys
ENSIPUG00000024020	SYMPK	76	71.118	ENSMEUG00000003866	SYMPK	69	87.712	Notamacropus_eugenii
ENSIPUG00000024020	SYMPK	89	72.694	ENSOPRG00000009967	SYMPK	86	72.777	Ochotona_princeps
ENSIPUG00000024020	SYMPK	95	70.539	ENSODEG00000007519	SYMPK	87	74.132	Octodon_degus
ENSIPUG00000024020	SYMPK	92	79.617	ENSONIG00000016802	sympk	94	82.645	Oreochromis_niloticus
ENSIPUG00000024020	SYMPK	78	72.045	ENSOCUG00000005511	SYMPK	90	72.045	Oryctolagus_cuniculus
ENSIPUG00000024020	SYMPK	89	82.609	ENSORLG00000015338	sympk	96	81.395	Oryzias_latipes
ENSIPUG00000024020	SYMPK	89	82.684	ENSORLG00020004402	sympk	89	83.210	Oryzias_latipes_hni
ENSIPUG00000024020	SYMPK	89	82.412	ENSORLG00015005712	sympk	89	82.934	Oryzias_latipes_hsok
ENSIPUG00000024020	SYMPK	94	79.625	ENSOMEG00000022561	sympk	90	83.349	Oryzias_melastigma
ENSIPUG00000024020	SYMPK	90	74.104	ENSOGAG00000013483	SYMPK	87	74.167	Otolemur_garnettii
ENSIPUG00000024020	SYMPK	89	71.029	ENSOARG00000010349	SYMPK	87	71.119	Ovis_aries
ENSIPUG00000024020	SYMPK	90	73.925	ENSPPAG00000043204	SYMPK	94	73.598	Pan_paniscus
ENSIPUG00000024020	SYMPK	90	74.194	ENSPPRG00000004282	SYMPK	87	74.257	Panthera_pardus
ENSIPUG00000024020	SYMPK	90	74.194	ENSPTIG00000015420	SYMPK	93	74.257	Panthera_tigris_altaica
ENSIPUG00000024020	SYMPK	90	73.925	ENSPTRG00000011169	SYMPK	94	73.598	Pan_troglodytes
ENSIPUG00000024020	SYMPK	90	74.014	ENSPANG00000019930	SYMPK	99	73.885	Papio_anubis
ENSIPUG00000024020	SYMPK	100	77.751	ENSPKIG00000017132	sympk	100	77.567	Paramormyrops_kingsleyae
ENSIPUG00000024020	SYMPK	90	73.835	ENSPEMG00000007564	Sympk	86	74.077	Peromyscus_maniculatus_bairdii
ENSIPUG00000024020	SYMPK	83	62.991	ENSPMAG00000004936	sympk	100	63.375	Petromyzon_marinus
ENSIPUG00000024020	SYMPK	90	74.263	ENSPCIG00000024476	SYMPK	90	72.840	Phascolarctos_cinereus
ENSIPUG00000024020	SYMPK	88	81.536	ENSPFOG00000001194	sympk	89	81.710	Poecilia_formosa
ENSIPUG00000024020	SYMPK	88	81.536	ENSPLAG00000012995	sympk	89	81.710	Poecilia_latipinna
ENSIPUG00000024020	SYMPK	88	81.536	ENSPMEG00000008099	sympk	89	81.710	Poecilia_mexicana
ENSIPUG00000024020	SYMPK	88	81.743	ENSPREG00000006176	sympk	89	82.227	Poecilia_reticulata
ENSIPUG00000024020	SYMPK	89	73.717	ENSPPYG00000010135	SYMPK	99	73.717	Pongo_abelii
ENSIPUG00000024020	SYMPK	83	78.475	ENSPCAG00000005182	SYMPK	80	78.685	Procavia_capensis
ENSIPUG00000024020	SYMPK	90	73.656	ENSPCOG00000023740	SYMPK	99	73.488	Propithecus_coquereli
ENSIPUG00000024020	SYMPK	90	72.670	ENSPVAG00000001355	SYMPK	89	72.727	Pteropus_vampyrus
ENSIPUG00000024020	SYMPK	88	83.257	ENSPNYG00000011455	sympk	88	83.502	Pundamilia_nyererei
ENSIPUG00000024020	SYMPK	99	86.911	ENSPNAG00000016505	sympk	99	86.521	Pygocentrus_nattereri
ENSIPUG00000024020	SYMPK	95	69.547	ENSRNOG00000014353	Sympk	86	73.987	Rattus_norvegicus
ENSIPUG00000024020	SYMPK	91	73.345	ENSRBIG00000040963	SYMPK	99	74.085	Rhinopithecus_bieti
ENSIPUG00000024020	SYMPK	90	74.014	ENSRROG00000024834	SYMPK	97	73.745	Rhinopithecus_roxellana
ENSIPUG00000024020	SYMPK	90	74.194	ENSSBOG00000034497	SYMPK	95	73.598	Saimiri_boliviensis_boliviensis
ENSIPUG00000024020	SYMPK	90	73.595	ENSSHAG00000003139	SYMPK	95	74.343	Sarcophilus_harrisii
ENSIPUG00000024020	SYMPK	100	75.851	ENSSFOG00015006974	sympk	90	82.691	Scleropages_formosus
ENSIPUG00000024020	SYMPK	94	79.113	ENSSMAG00000018130	sympk	71	83.303	Scophthalmus_maximus
ENSIPUG00000024020	SYMPK	98	77.823	ENSSDUG00000007092	sympk	89	84.206	Seriola_dumerili
ENSIPUG00000024020	SYMPK	98	77.823	ENSSLDG00000014774	sympk	96	81.211	Seriola_lalandi_dorsalis
ENSIPUG00000024020	SYMPK	57	86.154	ENSSARG00000004274	-	59	86.154	Sorex_araneus
ENSIPUG00000024020	SYMPK	93	71.588	ENSSPUG00000002789	SYMPK	87	71.588	Sphenodon_punctatus
ENSIPUG00000024020	SYMPK	87	84.580	ENSSPAG00000000854	sympk	89	84.424	Stegastes_partitus
ENSIPUG00000024020	SYMPK	90	74.104	ENSSSCG00000003093	SYMPK	87	74.167	Sus_scrofa
ENSIPUG00000024020	SYMPK	88	82.505	ENSTRUG00000010202	sympk	89	82.625	Takifugu_rubripes
ENSIPUG00000024020	SYMPK	88	81.635	ENSTNIG00000017855	sympk	96	81.902	Tetraodon_nigroviridis
ENSIPUG00000024020	SYMPK	79	88.961	ENSTBEG00000000454	SYMPK	77	88.961	Tupaia_belangeri
ENSIPUG00000024020	SYMPK	90	65.681	ENSTTRG00000014311	SYMPK	87	65.707	Tursiops_truncatus
ENSIPUG00000024020	SYMPK	94	68.919	ENSUAMG00000022272	SYMPK	95	71.670	Ursus_americanus
ENSIPUG00000024020	SYMPK	89	74.503	ENSUMAG00000023698	SYMPK	86	74.569	Ursus_maritimus
ENSIPUG00000024020	SYMPK	90	74.283	ENSVVUG00000003024	SYMPK	96	74.347	Vulpes_vulpes
ENSIPUG00000024020	SYMPK	88	67.780	ENSXETG00000024453	sympk	91	68.293	Xenopus_tropicalis
ENSIPUG00000024020	SYMPK	87	80.093	ENSXCOG00000015368	sympk	99	80.093	Xiphophorus_couchianus
ENSIPUG00000024020	SYMPK	89	81.108	ENSXMAG00000005737	sympk	89	81.543	Xiphophorus_maculatus