EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000024038 (Gene tree)
Gene ID: 108258978
Gene Symbol: rbm46
Alias: fe11d09|wu:fe11d09|zgc:153695
Full Name: RNA binding motif protein 46
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 5871 bases
Position: chr26:178509-184379
Accession: 108258978
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000035859	DND1_DSRM	PF14709.7	2.3e-17	1	1
ENSIPUP00000035860	DND1_DSRM	PF14709.7	2.3e-17	1	1
ENSIPUP00000035864	DND1_DSRM	PF14709.7	2.5e-17	1	1
ENSIPUP00000035864	RRM_1	PF00076.22	1.6e-29	1	3
ENSIPUP00000035864	RRM_1	PF00076.22	1.6e-29	2	3
ENSIPUP00000035864	RRM_1	PF00076.22	1.6e-29	3	3
ENSIPUP00000035859	RRM_1	PF00076.22	2.3e-29	1	3
ENSIPUP00000035859	RRM_1	PF00076.22	2.3e-29	2	3
ENSIPUP00000035859	RRM_1	PF00076.22	2.3e-29	3	3
ENSIPUP00000035860	RRM_1	PF00076.22	2.3e-29	1	3
ENSIPUP00000035860	RRM_1	PF00076.22	2.3e-29	2	3
ENSIPUP00000035860	RRM_1	PF00076.22	2.3e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000037275	-	1485	-	ENSIPUP00000035864	494 (aa)	-	-
ENSIPUT00000037271	-	2306	XM_017458051	ENSIPUP00000035860	539 (aa)	XP_017313540	A0A2D0Q5F7
ENSIPUT00000037270	-	2360	XM_017458049	ENSIPUP00000035859	539 (aa)	XP_017313538	A0A2D0Q5F7

Gene Model

Click here to download ENSIPUG00000024038's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000024038's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000024038	rbm46	58	56.014	ENSIPUG00000005704	syncripl	53	55.516
ENSIPUG00000024038	rbm46	60	68.792	ENSIPUG00000004743	rbm47	52	66.319
ENSIPUG00000024038	rbm46	58	53.265	ENSIPUG00000015632	syncrip	50	53.381
ENSIPUG00000024038	rbm46	89	66.019	ENSIPUG00000010367	a1cf	75	67.230

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000024038	rbm46	97	66.667	ENSG00000151962	RBM46	95	83.465	Homo_sapiens
ENSIPUG00000024038	rbm46	94	68.288	ENSAPOG00000009209	rbm46	92	65.112	Acanthochromis_polyacanthus
ENSIPUG00000024038	rbm46	96	67.155	ENSAMEG00000013290	RBM46	99	63.119	Ailuropoda_melanoleuca
ENSIPUG00000024038	rbm46	97	61.167	ENSACIG00000014500	rbm46	86	61.783	Amphilophus_citrinellus
ENSIPUG00000024038	rbm46	95	67.585	ENSAOCG00000001892	-	91	65.060	Amphiprion_ocellaris
ENSIPUG00000024038	rbm46	94	67.819	ENSAPEG00000017762	rbm46	96	67.692	Amphiprion_percula
ENSIPUG00000024038	rbm46	95	66.808	ENSATEG00000010775	rbm46	96	60.000	Anabas_testudineus
ENSIPUG00000024038	rbm46	94	67.452	ENSAPLG00000005116	RBM46	96	67.452	Anas_platyrhynchos
ENSIPUG00000024038	rbm46	96	65.828	ENSACAG00000015599	RBM46	99	62.132	Anolis_carolinensis
ENSIPUG00000024038	rbm46	97	66.667	ENSANAG00000029193	RBM46	99	67.152	Aotus_nancymaae
ENSIPUG00000024038	rbm46	96	66.390	ENSACLG00000016153	rbm46	95	59.028	Astatotilapia_calliptera
ENSIPUG00000024038	rbm46	94	75.480	ENSAMXG00000009397	rbm46	95	76.159	Astyanax_mexicanus
ENSIPUG00000024038	rbm46	94	75.480	ENSAMXG00000020892	-	97	73.025	Astyanax_mexicanus
ENSIPUG00000024038	rbm46	97	66.667	ENSBTAG00000001696	RBM46	96	67.010	Bos_taurus
ENSIPUG00000024038	rbm46	98	66.463	ENSCJAG00000001768	RBM46	99	67.775	Callithrix_jacchus
ENSIPUG00000024038	rbm46	98	65.650	ENSCAFG00000008473	RBM46	98	65.650	Canis_familiaris
ENSIPUG00000024038	rbm46	99	64.286	ENSCAFG00020002468	RBM46	99	64.286	Canis_lupus_dingo
ENSIPUG00000024038	rbm46	97	66.872	ENSCHIG00000000502	RBM46	96	67.216	Capra_hircus
ENSIPUG00000024038	rbm46	96	67.223	ENSTSYG00000010435	RBM46	98	67.223	Carlito_syrichta
ENSIPUG00000024038	rbm46	96	66.042	ENSCAPG00000011928	-	95	66.388	Cavia_aperea
ENSIPUG00000024038	rbm46	77	68.325	ENSCAPG00000011841	-	99	68.241	Cavia_aperea
ENSIPUG00000024038	rbm46	97	66.186	ENSCPOG00000020396	-	93	66.460	Cavia_porcellus
ENSIPUG00000024038	rbm46	98	63.618	ENSCPOG00000019272	-	99	60.036	Cavia_porcellus
ENSIPUG00000024038	rbm46	96	66.320	ENSCPOG00000010284	-	99	66.320	Cavia_porcellus
ENSIPUG00000024038	rbm46	96	55.165	ENSCCAG00000001323	-	98	54.970	Cebus_capucinus
ENSIPUG00000024038	rbm46	98	65.854	ENSCCAG00000027619	-	99	67.360	Cebus_capucinus
ENSIPUG00000024038	rbm46	98	65.923	ENSCATG00000040148	RBM46	99	67.427	Cercocebus_atys
ENSIPUG00000024038	rbm46	98	64.634	ENSCLAG00000005846	-	99	66.112	Chinchilla_lanigera
ENSIPUG00000024038	rbm46	96	66.667	ENSCLAG00000011886	-	89	67.015	Chinchilla_lanigera
ENSIPUG00000024038	rbm46	96	67.364	ENSCSAG00000003263	RBM46	99	62.936	Chlorocebus_sabaeus
ENSIPUG00000024038	rbm46	96	66.318	ENSCHOG00000003429	RBM46	99	62.752	Choloepus_hoffmanni
ENSIPUG00000024038	rbm46	91	67.031	ENSCPBG00000009314	RBM46	96	67.031	Chrysemys_picta_bellii
ENSIPUG00000024038	rbm46	96	67.152	ENSCANG00000039065	RBM46	99	67.152	Colobus_angolensis_palliatus
ENSIPUG00000024038	rbm46	96	66.946	ENSCGRG00001016714	Rbm46	99	66.944	Cricetulus_griseus_chok1gshd
ENSIPUG00000024038	rbm46	96	66.946	ENSCGRG00000011738	Rbm46	99	66.944	Cricetulus_griseus_crigri
ENSIPUG00000024038	rbm46	97	57.026	ENSCSEG00000005530	rbm46	94	57.419	Cynoglossus_semilaevis
ENSIPUG00000024038	rbm46	95	62.633	ENSCVAG00000021013	rbm46	94	62.128	Cyprinodon_variegatus
ENSIPUG00000024038	rbm46	97	74.857	ENSDARG00000079452	rbm46	97	75.000	Danio_rerio
ENSIPUG00000024038	rbm46	96	66.527	ENSDNOG00000016195	RBM46	99	62.752	Dasypus_novemcinctus
ENSIPUG00000024038	rbm46	98	65.854	ENSDORG00000006405	Rbm46	99	66.944	Dipodomys_ordii
ENSIPUG00000024038	rbm46	96	67.364	ENSETEG00000014902	RBM46	99	62.500	Echinops_telfairi
ENSIPUG00000024038	rbm46	96	66.667	ENSEASG00005015821	RBM46	99	62.888	Equus_asinus_asinus
ENSIPUG00000024038	rbm46	98	65.182	ENSECAG00000007649	RBM46	98	64.980	Equus_caballus
ENSIPUG00000024038	rbm46	97	64.213	ENSEEUG00000011824	RBM46	99	60.980	Erinaceus_europaeus
ENSIPUG00000024038	rbm46	80	70.720	ENSELUG00000008166	rbm46	99	71.287	Esox_lucius
ENSIPUG00000024038	rbm46	98	66.189	ENSFCAG00000029812	RBM46	99	66.944	Felis_catus
ENSIPUG00000024038	rbm46	93	67.024	ENSFALG00000013157	RBM46	86	67.253	Ficedula_albicollis
ENSIPUG00000024038	rbm46	96	65.618	ENSFDAG00000019281	-	99	61.213	Fukomys_damarensis
ENSIPUG00000024038	rbm46	96	64.375	ENSFDAG00000006445	-	91	64.718	Fukomys_damarensis
ENSIPUG00000024038	rbm46	82	64.634	ENSFHEG00000013257	rbm46	87	64.390	Fundulus_heteroclitus
ENSIPUG00000024038	rbm46	91	63.974	ENSGALG00000009278	RBM46	93	64.114	Gallus_gallus
ENSIPUG00000024038	rbm46	70	73.938	ENSGAFG00000020245	rbm46	71	80.130	Gambusia_affinis
ENSIPUG00000024038	rbm46	96	67.083	ENSGAGG00000002019	RBM46	90	66.189	Gopherus_agassizii
ENSIPUG00000024038	rbm46	98	65.650	ENSGGOG00000001876	RBM46	99	67.152	Gorilla_gorilla
ENSIPUG00000024038	rbm46	96	61.845	ENSHBUG00000009609	rbm46	94	65.198	Haplochromis_burtoni
ENSIPUG00000024038	rbm46	97	53.371	ENSHGLG00000010742	-	96	52.794	Heterocephalus_glaber_female
ENSIPUG00000024038	rbm46	98	54.453	ENSHGLG00000002940	-	97	52.662	Heterocephalus_glaber_female
ENSIPUG00000024038	rbm46	99	58.442	ENSHGLG00000002463	-	98	66.591	Heterocephalus_glaber_female
ENSIPUG00000024038	rbm46	98	51.303	ENSHGLG00100018987	-	97	50.094	Heterocephalus_glaber_male
ENSIPUG00000024038	rbm46	97	53.371	ENSHGLG00100004977	-	96	52.794	Heterocephalus_glaber_male
ENSIPUG00000024038	rbm46	96	65.281	ENSHGLG00100012752	-	99	65.281	Heterocephalus_glaber_male
ENSIPUG00000024038	rbm46	93	49.455	ENSHCOG00000012998	rbm46	87	49.227	Hippocampus_comes
ENSIPUG00000024038	rbm46	98	65.447	ENSSTOG00000007918	RBM46	99	66.944	Ictidomys_tridecemlineatus
ENSIPUG00000024038	rbm46	96	67.155	ENSJJAG00000003902	Rbm46	98	67.155	Jaculus_jaculus
ENSIPUG00000024038	rbm46	92	68.261	ENSKMAG00000015127	rbm46	89	64.300	Kryptolebias_marmoratus
ENSIPUG00000024038	rbm46	99	65.370	ENSLACG00000002062	RBM46	98	65.185	Latimeria_chalumnae
ENSIPUG00000024038	rbm46	95	71.338	ENSLOCG00000008298	rbm46	94	72.406	Lepisosteus_oculatus
ENSIPUG00000024038	rbm46	96	67.223	ENSLAFG00000015448	RBM46	99	67.223	Loxodonta_africana
ENSIPUG00000024038	rbm46	98	65.650	ENSMFAG00000043485	RBM46	99	67.152	Macaca_fascicularis
ENSIPUG00000024038	rbm46	98	65.650	ENSMMUG00000021147	RBM46	98	65.650	Macaca_mulatta
ENSIPUG00000024038	rbm46	98	65.650	ENSMNEG00000002787	RBM46	99	67.152	Macaca_nemestrina
ENSIPUG00000024038	rbm46	98	65.923	ENSMLEG00000029756	RBM46	99	67.427	Mandrillus_leucophaeus
ENSIPUG00000024038	rbm46	94	68.365	ENSMAMG00000009093	rbm46	97	63.077	Mastacembelus_armatus
ENSIPUG00000024038	rbm46	98	65.235	ENSMZEG00005027849	rbm46	96	62.777	Maylandia_zebra
ENSIPUG00000024038	rbm46	91	64.114	ENSMGAG00000001457	RBM46	93	64.176	Meleagris_gallopavo
ENSIPUG00000024038	rbm46	96	66.946	ENSMAUG00000009911	Rbm46	99	66.944	Mesocricetus_auratus
ENSIPUG00000024038	rbm46	98	65.447	ENSMICG00000042747	RBM46	99	66.944	Microcebus_murinus
ENSIPUG00000024038	rbm46	96	66.946	ENSMOCG00000001188	Rbm46	99	66.944	Microtus_ochrogaster
ENSIPUG00000024038	rbm46	95	62.605	ENSMMOG00000011214	rbm46	96	56.877	Mola_mola
ENSIPUG00000024038	rbm46	96	66.458	ENSMODG00000001302	RBM46	80	66.460	Monodelphis_domestica
ENSIPUG00000024038	rbm46	93	63.617	ENSMALG00000006185	rbm46	92	63.229	Monopterus_albus
ENSIPUG00000024038	rbm46	96	66.946	MGP_CAROLIEiJ_G0025101	Rbm46	99	66.944	Mus_caroli
ENSIPUG00000024038	rbm46	96	67.155	ENSMUSG00000033882	Rbm46	99	67.152	Mus_musculus
ENSIPUG00000024038	rbm46	96	67.155	MGP_PahariEiJ_G0026544	Rbm46	99	67.152	Mus_pahari
ENSIPUG00000024038	rbm46	96	66.946	MGP_SPRETEiJ_G0026043	Rbm46	99	66.944	Mus_spretus
ENSIPUG00000024038	rbm46	98	65.650	ENSMPUG00000005670	RBM46	98	65.650	Mustela_putorius_furo
ENSIPUG00000024038	rbm46	96	66.528	ENSMLUG00000003221	RBM46	99	62.774	Myotis_lucifugus
ENSIPUG00000024038	rbm46	96	67.223	ENSNGAG00000004231	Rbm46	99	67.220	Nannospalax_galili
ENSIPUG00000024038	rbm46	96	65.126	ENSNBRG00000000273	rbm46	88	63.975	Neolamprologus_brichardi
ENSIPUG00000024038	rbm46	98	65.789	ENSNLEG00000006184	RBM46	99	66.944	Nomascus_leucogenys
ENSIPUG00000024038	rbm46	87	66.513	ENSMEUG00000013328	RBM46	98	65.802	Notamacropus_eugenii
ENSIPUG00000024038	rbm46	56	79.422	ENSOPRG00000007136	RBM46	98	80.505	Ochotona_princeps
ENSIPUG00000024038	rbm46	96	66.736	ENSODEG00000000735	-	99	66.736	Octodon_degus
ENSIPUG00000024038	rbm46	96	66.042	ENSODEG00000018002	-	90	66.388	Octodon_degus
ENSIPUG00000024038	rbm46	94	65.517	ENSONIG00000014096	rbm46	95	66.231	Oreochromis_niloticus
ENSIPUG00000024038	rbm46	99	64.980	ENSOANG00000002141	RBM46	96	65.975	Ornithorhynchus_anatinus
ENSIPUG00000024038	rbm46	96	67.155	ENSOCUG00000017859	RBM46	99	63.119	Oryctolagus_cuniculus
ENSIPUG00000024038	rbm46	96	63.617	ENSORLG00000002429	rbm46	91	63.333	Oryzias_latipes
ENSIPUG00000024038	rbm46	96	64.644	ENSORLG00020022154	rbm46	90	61.950	Oryzias_latipes_hni
ENSIPUG00000024038	rbm46	99	62.602	ENSORLG00015020234	rbm46	96	62.651	Oryzias_latipes_hsok
ENSIPUG00000024038	rbm46	93	61.983	ENSOMEG00000022580	rbm46	87	63.191	Oryzias_melastigma
ENSIPUG00000024038	rbm46	96	67.155	ENSOGAG00000005647	RBM46	99	63.303	Otolemur_garnettii
ENSIPUG00000024038	rbm46	97	66.461	ENSOARG00000016406	RBM46	96	66.804	Ovis_aries
ENSIPUG00000024038	rbm46	98	65.650	ENSPPAG00000043236	RBM46	99	67.152	Pan_paniscus
ENSIPUG00000024038	rbm46	96	67.155	ENSPPRG00000009416	RBM46	99	66.944	Panthera_pardus
ENSIPUG00000024038	rbm46	96	67.155	ENSPTIG00000017449	RBM46	99	66.944	Panthera_tigris_altaica
ENSIPUG00000024038	rbm46	98	65.650	ENSPTRG00000016538	RBM46	99	67.152	Pan_troglodytes
ENSIPUG00000024038	rbm46	98	65.650	ENSPANG00000004186	RBM46	99	67.152	Papio_anubis
ENSIPUG00000024038	rbm46	97	69.084	ENSPKIG00000015334	rbm46	87	68.677	Paramormyrops_kingsleyae
ENSIPUG00000024038	rbm46	99	66.599	ENSPSIG00000006429	RBM46	97	66.599	Pelodiscus_sinensis
ENSIPUG00000024038	rbm46	94	85.714	ENSPMGG00000019872	rbm46	91	85.992	Periophthalmus_magnuspinnatus
ENSIPUG00000024038	rbm46	96	66.946	ENSPEMG00000013899	Rbm46	99	66.944	Peromyscus_maniculatus_bairdii
ENSIPUG00000024038	rbm46	98	65.041	ENSPCIG00000029626	RBM46	98	65.041	Phascolarctos_cinereus
ENSIPUG00000024038	rbm46	94	57.006	ENSPFOG00000001079	rbm46	83	72.253	Poecilia_formosa
ENSIPUG00000024038	rbm46	94	68.936	ENSPLAG00000004541	rbm46	81	67.500	Poecilia_latipinna
ENSIPUG00000024038	rbm46	94	68.936	ENSPMEG00000015724	rbm46	94	66.598	Poecilia_mexicana
ENSIPUG00000024038	rbm46	94	68.936	ENSPREG00000014464	rbm46	97	65.145	Poecilia_reticulata
ENSIPUG00000024038	rbm46	96	67.155	ENSPPYG00000015144	RBM46	99	63.486	Pongo_abelii
ENSIPUG00000024038	rbm46	98	61.992	ENSPCAG00000003110	RBM46	93	60.819	Procavia_capensis
ENSIPUG00000024038	rbm46	98	65.041	ENSPCOG00000024347	RBM46	99	66.528	Propithecus_coquereli
ENSIPUG00000024038	rbm46	96	67.155	ENSPVAG00000008376	RBM46	99	63.051	Pteropus_vampyrus
ENSIPUG00000024038	rbm46	93	85.249	ENSPNAG00000025312	rbm46	97	80.971	Pygocentrus_nattereri
ENSIPUG00000024038	rbm46	96	66.946	ENSRNOG00000025823	Rbm46	99	62.752	Rattus_norvegicus
ENSIPUG00000024038	rbm46	97	66.322	ENSRBIG00000032583	RBM46	99	66.944	Rhinopithecus_bieti
ENSIPUG00000024038	rbm46	96	66.736	ENSRROG00000044288	RBM46	99	66.736	Rhinopithecus_roxellana
ENSIPUG00000024038	rbm46	98	65.854	ENSSBOG00000033028	RBM46	99	67.360	Saimiri_boliviensis_boliviensis
ENSIPUG00000024038	rbm46	96	66.736	ENSSHAG00000012596	RBM46	99	62.936	Sarcophilus_harrisii
ENSIPUG00000024038	rbm46	97	67.664	ENSSFOG00015000087	rbm46	94	66.286	Scleropages_formosus
ENSIPUG00000024038	rbm46	93	63.399	ENSSMAG00000017042	rbm46	91	62.889	Scophthalmus_maximus
ENSIPUG00000024038	rbm46	96	68.607	ENSSDUG00000020645	rbm46	90	67.629	Seriola_dumerili
ENSIPUG00000024038	rbm46	96	67.364	ENSSARG00000006520	RBM46	99	63.486	Sorex_araneus
ENSIPUG00000024038	rbm46	96	67.427	ENSSPUG00000004773	-	98	67.010	Sphenodon_punctatus
ENSIPUG00000024038	rbm46	96	67.562	ENSSPUG00000012525	-	99	62.929	Sphenodon_punctatus
ENSIPUG00000024038	rbm46	96	63.333	ENSSPAG00000013697	rbm46	94	63.597	Stegastes_partitus
ENSIPUG00000024038	rbm46	98	65.984	ENSSSCG00000008994	RBM46	95	66.597	Sus_scrofa
ENSIPUG00000024038	rbm46	95	65.966	ENSTGUG00000005307	RBM46	94	66.594	Taeniopygia_guttata
ENSIPUG00000024038	rbm46	96	63.598	ENSTRUG00000004237	rbm46	92	62.839	Takifugu_rubripes
ENSIPUG00000024038	rbm46	98	62.168	ENSTNIG00000008714	rbm46	88	60.941	Tetraodon_nigroviridis
ENSIPUG00000024038	rbm46	97	64.609	ENSTBEG00000013949	RBM46	99	61.314	Tupaia_belangeri
ENSIPUG00000024038	rbm46	96	66.946	ENSTTRG00000001239	RBM46	99	62.569	Tursiops_truncatus
ENSIPUG00000024038	rbm46	98	65.650	ENSUAMG00000026593	RBM46	98	65.650	Ursus_americanus
ENSIPUG00000024038	rbm46	98	65.650	ENSUMAG00000016442	RBM46	98	65.650	Ursus_maritimus
ENSIPUG00000024038	rbm46	98	65.650	ENSVVUG00000024957	RBM46	99	67.012	Vulpes_vulpes
ENSIPUG00000024038	rbm46	98	44.689	ENSXETG00000032344	-	99	42.754	Xenopus_tropicalis
ENSIPUG00000024038	rbm46	69	61.739	ENSXETG00000032067	-	93	61.159	Xenopus_tropicalis
ENSIPUG00000024038	rbm46	98	61.711	ENSXETG00000022412	-	98	57.537	Xenopus_tropicalis
ENSIPUG00000024038	rbm46	96	64.706	ENSXMAG00000008237	rbm46	94	63.095	Xiphophorus_maculatus