EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000024047 (Gene tree)
Gene ID: 100304950
Gene Symbol: hnrnph1l
Alias: fb19a06|wu:fb19a06|zgc:55399|zgc:85960
Full Name: heterogeneous nuclear ribonucleoprotein H
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 10013 bases
Position: chr18:13906129-13916141
Accession: 100304950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000035879	zf-RNPHF	PF08080.12	6.7e-07	1	1
ENSIPUP00000035881	RRM_1	PF00076.22	7.3e-30	1	3
ENSIPUP00000035881	RRM_1	PF00076.22	7.3e-30	2	3
ENSIPUP00000035881	RRM_1	PF00076.22	7.3e-30	3	3
ENSIPUP00000035883	RRM_1	PF00076.22	7.4e-30	1	3
ENSIPUP00000035883	RRM_1	PF00076.22	7.4e-30	2	3
ENSIPUP00000035883	RRM_1	PF00076.22	7.4e-30	3	3
ENSIPUP00000035879	RRM_1	PF00076.22	8.6e-30	1	3
ENSIPUP00000035879	RRM_1	PF00076.22	8.6e-30	2	3
ENSIPUP00000035879	RRM_1	PF00076.22	8.6e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000037290	-	1320	-	ENSIPUP00000035879	439 (aa)	-	-
ENSIPUT00000037292	-	2847	-	ENSIPUP00000035881	418 (aa)	-	-
ENSIPUT00000037294	-	3676	XM_017492655	ENSIPUP00000035883	420 (aa)	XP_017348144	-

Gene Model

Click here to download ENSIPUG00000024047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000024047's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000024047	hnrnph1l	98	79.426	ENSIPUG00000018262	hnrnph1	95	83.887
ENSIPUG00000024047	hnrnph1l	90	59.079	ENSIPUG00000016015	hnrnph3	92	60.763
ENSIPUG00000024047	hnrnph1l	78	42.683	ENSIPUG00000010533	grsf1	75	42.683

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000024047	hnrnph1l	96	82.598	ENSAPOG00000016614	hnrnph1	95	84.062	Acanthochromis_polyacanthus
ENSIPUG00000024047	hnrnph1l	91	85.372	ENSACIG00000008964	hnrnph1	97	84.574	Amphilophus_citrinellus
ENSIPUG00000024047	hnrnph1l	90	86.016	ENSAOCG00000008372	hnrnph1	95	84.319	Amphiprion_ocellaris
ENSIPUG00000024047	hnrnph1l	90	85.752	ENSAPEG00000012980	hnrnph1	95	84.062	Amphiprion_percula
ENSIPUG00000024047	hnrnph1l	90	85.752	ENSATEG00000002792	hnrnph1	95	84.062	Anabas_testudineus
ENSIPUG00000024047	hnrnph1l	96	70.861	ENSACAG00000016323	-	95	77.901	Anolis_carolinensis
ENSIPUG00000024047	hnrnph1l	93	82.016	ENSACLG00000003313	hnrnph1	94	84.527	Astatotilapia_calliptera
ENSIPUG00000024047	hnrnph1l	98	91.484	ENSAMXG00000030703	hnrnph1l	85	91.400	Astyanax_mexicanus
ENSIPUG00000024047	hnrnph1l	97	79.759	ENSAMXG00000002483	hnrnph1	99	84.697	Astyanax_mexicanus
ENSIPUG00000024047	hnrnph1l	90	84.697	ENSCSEG00000015891	hnrnph1	94	84.833	Cynoglossus_semilaevis
ENSIPUG00000024047	hnrnph1l	96	81.818	ENSCVAG00000014097	hnrnph1	95	83.805	Cyprinodon_variegatus
ENSIPUG00000024047	hnrnph1l	95	85.224	ENSDARG00000040881	hnrnph1	97	84.184	Danio_rerio
ENSIPUG00000024047	hnrnph1l	93	87.563	ENSDARG00000005551	hnrnph1l	97	88.579	Danio_rerio
ENSIPUG00000024047	hnrnph1l	97	78.774	ENSELUG00000006715	hnrnph1	97	86.494	Esox_lucius
ENSIPUG00000024047	hnrnph1l	90	85.564	ENSELUG00000021437	-	99	87.664	Esox_lucius
ENSIPUG00000024047	hnrnph1l	97	81.081	ENSFHEG00000008474	hnrnph1	96	82.776	Fundulus_heteroclitus
ENSIPUG00000024047	hnrnph1l	92	80.050	ENSGMOG00000006782	hnrnph1	99	79.551	Gadus_morhua
ENSIPUG00000024047	hnrnph1l	96	81.081	ENSGAFG00000006280	hnrnph1	95	83.033	Gambusia_affinis
ENSIPUG00000024047	hnrnph1l	82	82.609	ENSGACG00000018352	hnrnph1	94	81.050	Gasterosteus_aculeatus
ENSIPUG00000024047	hnrnph1l	83	83.106	ENSHBUG00000010547	hnrnph1	96	84.181	Haplochromis_burtoni
ENSIPUG00000024047	hnrnph1l	90	77.749	ENSHCOG00000004513	hnrnph1	95	78.055	Hippocampus_comes
ENSIPUG00000024047	hnrnph1l	98	78.606	ENSKMAG00000018802	hnrnph1	95	82.143	Kryptolebias_marmoratus
ENSIPUG00000024047	hnrnph1l	90	85.224	ENSLBEG00000027811	hnrnph1	95	83.548	Labrus_bergylta
ENSIPUG00000024047	hnrnph1l	95	78.870	ENSLOCG00000012510	hnrnph1	92	77.641	Lepisosteus_oculatus
ENSIPUG00000024047	hnrnph1l	97	52.546	ENSMMUG00000017392	-	87	54.444	Macaca_mulatta
ENSIPUG00000024047	hnrnph1l	97	53.009	ENSMNEG00000030544	-	87	54.444	Macaca_nemestrina
ENSIPUG00000024047	hnrnph1l	82	81.892	ENSMAMG00000011478	hnrnph1	94	84.375	Mastacembelus_armatus
ENSIPUG00000024047	hnrnph1l	96	81.327	ENSMZEG00005009791	hnrnph1	95	83.548	Maylandia_zebra
ENSIPUG00000024047	hnrnph1l	89	80.739	ENSMMOG00000009064	hnrnph1	98	81.053	Mola_mola
ENSIPUG00000024047	hnrnph1l	73	51.786	ENSMODG00000002200	-	85	52.595	Monodelphis_domestica
ENSIPUG00000024047	hnrnph1l	82	84.123	ENSMALG00000003999	hnrnph1	95	85.797	Monopterus_albus
ENSIPUG00000024047	hnrnph1l	82	83.473	ENSNBRG00000015406	hnrnph1	94	84.527	Neolamprologus_brichardi
ENSIPUG00000024047	hnrnph1l	96	81.572	ENSONIG00000017754	hnrnph1	95	83.805	Oreochromis_niloticus
ENSIPUG00000024047	hnrnph1l	90	83.377	ENSORLG00000006932	hnrnph1	95	81.266	Oryzias_latipes
ENSIPUG00000024047	hnrnph1l	90	83.117	ENSORLG00020007881	hnrnph1	95	81.013	Oryzias_latipes_hni
ENSIPUG00000024047	hnrnph1l	90	83.377	ENSORLG00015005306	hnrnph1	95	81.266	Oryzias_latipes_hsok
ENSIPUG00000024047	hnrnph1l	90	84.881	ENSOMEG00000009827	hnrnph1	98	84.085	Oryzias_melastigma
ENSIPUG00000024047	hnrnph1l	97	85.194	ENSPKIG00000018203	hnrnph1l	97	85.570	Paramormyrops_kingsleyae
ENSIPUG00000024047	hnrnph1l	91	79.703	ENSPKIG00000009532	-	95	77.536	Paramormyrops_kingsleyae
ENSIPUG00000024047	hnrnph1l	90	85.488	ENSPMGG00000012151	hnrnph1	95	84.062	Periophthalmus_magnuspinnatus
ENSIPUG00000024047	hnrnph1l	96	81.081	ENSPFOG00000004097	hnrnph1	95	83.290	Poecilia_formosa
ENSIPUG00000024047	hnrnph1l	96	81.081	ENSPLAG00000011771	hnrnph1	95	83.290	Poecilia_latipinna
ENSIPUG00000024047	hnrnph1l	96	81.327	ENSPMEG00000019446	hnrnph1	95	83.290	Poecilia_mexicana
ENSIPUG00000024047	hnrnph1l	96	81.327	ENSPREG00000005780	hnrnph1	95	83.290	Poecilia_reticulata
ENSIPUG00000024047	hnrnph1l	96	81.327	ENSPNYG00000000204	hnrnph1	96	84.181	Pundamilia_nyererei
ENSIPUG00000024047	hnrnph1l	97	93.382	ENSPNAG00000002784	hnrnph1l	100	92.157	Pygocentrus_nattereri
ENSIPUG00000024047	hnrnph1l	95	84.238	ENSPNAG00000000439	hnrnph1	98	84.062	Pygocentrus_nattereri
ENSIPUG00000024047	hnrnph1l	94	85.176	ENSSFOG00015022796	hnrnph1l	99	83.421	Scleropages_formosus
ENSIPUG00000024047	hnrnph1l	93	85.166	ENSSFOG00015016055	-	96	84.655	Scleropages_formosus
ENSIPUG00000024047	hnrnph1l	91	81.841	ENSSMAG00000007820	hnrnph1	96	80.818	Scophthalmus_maximus
ENSIPUG00000024047	hnrnph1l	90	86.016	ENSSDUG00000008785	hnrnph1	95	84.319	Seriola_dumerili
ENSIPUG00000024047	hnrnph1l	90	86.016	ENSSLDG00000010685	hnrnph1	95	84.319	Seriola_lalandi_dorsalis
ENSIPUG00000024047	hnrnph1l	97	81.265	ENSSPAG00000009921	hnrnph1	95	84.062	Stegastes_partitus
ENSIPUG00000024047	hnrnph1l	96	80.835	ENSTRUG00000020069	hnrnph1	95	83.033	Takifugu_rubripes
ENSIPUG00000024047	hnrnph1l	96	71.689	ENSXETG00000018321	hnrnph1	92	71.463	Xenopus_tropicalis
ENSIPUG00000024047	hnrnph1l	90	81.586	ENSXCOG00000009133	hnrnph1	96	79.028	Xiphophorus_couchianus
ENSIPUG00000024047	hnrnph1l	90	85.106	ENSXMAG00000021332	hnrnph1	98	84.043	Xiphophorus_maculatus