EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000024153 (Gene tree)
Gene ID: 108260278
Gene Symbol: gfm2
Alias: si:dkey-35i22.3|zgc:153835
Full Name: G elongation factor mitochondrial 2
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 34012 bases
Position: chr28:6325945-6359956
Accession: 108260278
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000036042	GTP_EFTU	PF00009.27	1.1e-65	1	1
ENSIPUP00000036051	GTP_EFTU	PF00009.27	1.5e-65	1	1
ENSIPUP00000036053	GTP_EFTU	PF00009.27	4.6e-64	1	1
ENSIPUP00000036053	MMR_HSR1	PF01926.23	4.2e-05	1	1
ENSIPUP00000036051	MMR_HSR1	PF01926.23	4.5e-05	1	1
ENSIPUP00000036042	MMR_HSR1	PF01926.23	4.6e-05	1	1
ENSIPUP00000036053	GTP_EFTU_D2	PF03144.25	1.8e-08	1	1
ENSIPUP00000036051	GTP_EFTU_D2	PF03144.25	1.8e-08	1	1
ENSIPUP00000036042	GTP_EFTU_D2	PF03144.25	1.8e-08	1	1
ENSIPUP00000036053	EFG_IV	PF03764.18	4.8e-10	1	1
ENSIPUP00000036051	EFG_IV	PF03764.18	5.1e-10	1	1
ENSIPUP00000036042	EFG_IV	PF03764.18	5.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000037466	-	2280	-	ENSIPUP00000036051	759 (aa)	-	-
ENSIPUT00000037456	-	2986	XM_017460416	ENSIPUP00000036042	765 (aa)	XP_017315905	W5UJI2
ENSIPUT00000037468	-	2220	-	ENSIPUP00000036053	739 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000024153's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000024153's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000024153	gfm2	93	35.589	ENSIPUG00000005873	gfm1	92	35.453

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000024153	gfm2	95	69.220	ENSG00000164347	GFM2	100	90.625	Homo_sapiens
ENSIPUG00000024153	gfm2	99	77.675	ENSAPOG00000005965	gfm2	98	77.675	Acanthochromis_polyacanthus
ENSIPUG00000024153	gfm2	96	69.189	ENSAMEG00000000544	GFM2	94	69.189	Ailuropoda_melanoleuca
ENSIPUG00000024153	gfm2	94	76.487	ENSACIG00000003338	gfm2	99	75.380	Amphilophus_citrinellus
ENSIPUG00000024153	gfm2	99	77.866	ENSAOCG00000014342	gfm2	98	77.866	Amphiprion_ocellaris
ENSIPUG00000024153	gfm2	99	77.602	ENSAPEG00000000424	gfm2	98	77.602	Amphiprion_percula
ENSIPUG00000024153	gfm2	100	77.184	ENSATEG00000010821	gfm2	99	77.184	Anabas_testudineus
ENSIPUG00000024153	gfm2	98	66.667	ENSAPLG00000007221	GFM2	95	66.667	Anas_platyrhynchos
ENSIPUG00000024153	gfm2	96	66.848	ENSACAG00000009011	GFM2	94	66.848	Anolis_carolinensis
ENSIPUG00000024153	gfm2	96	58.784	ENSANAG00000027737	GFM2	94	58.784	Aotus_nancymaae
ENSIPUG00000024153	gfm2	98	76.368	ENSACLG00000027430	gfm2	99	75.304	Astatotilapia_calliptera
ENSIPUG00000024153	gfm2	100	84.565	ENSAMXG00000009979	gfm2	100	84.565	Astyanax_mexicanus
ENSIPUG00000024153	gfm2	96	68.059	ENSBTAG00000015519	GFM2	95	68.059	Bos_taurus
ENSIPUG00000024153	gfm2	94	38.022	WBGene00022491	Y119D3B.14	97	38.624	Caenorhabditis_elegans
ENSIPUG00000024153	gfm2	96	68.961	ENSCJAG00000016802	GFM2	94	68.919	Callithrix_jacchus
ENSIPUG00000024153	gfm2	96	68.059	ENSCAFG00000008298	GFM2	94	68.059	Canis_familiaris
ENSIPUG00000024153	gfm2	96	68.059	ENSCAFG00020016998	GFM2	97	68.059	Canis_lupus_dingo
ENSIPUG00000024153	gfm2	96	68.329	ENSCHIG00000012765	GFM2	95	68.329	Capra_hircus
ENSIPUG00000024153	gfm2	60	71.645	ENSTSYG00000011664	GFM2	90	71.645	Carlito_syrichta
ENSIPUG00000024153	gfm2	90	48.991	ENSCAPG00000003480	GFM2	91	48.949	Cavia_aperea
ENSIPUG00000024153	gfm2	95	66.952	ENSCPOG00000006332	GFM2	95	66.849	Cavia_porcellus
ENSIPUG00000024153	gfm2	96	69.272	ENSCCAG00000029580	GFM2	94	69.272	Cebus_capucinus
ENSIPUG00000024153	gfm2	96	68.606	ENSCATG00000036394	GFM2	94	68.606	Cercocebus_atys
ENSIPUG00000024153	gfm2	98	66.404	ENSCLAG00000013440	GFM2	97	66.404	Chinchilla_lanigera
ENSIPUG00000024153	gfm2	96	68.471	ENSCSAG00000015464	GFM2	94	68.471	Chlorocebus_sabaeus
ENSIPUG00000024153	gfm2	81	70.816	ENSCHOG00000002245	GFM2	80	70.816	Choloepus_hoffmanni
ENSIPUG00000024153	gfm2	96	70.204	ENSCPBG00000000761	GFM2	97	70.204	Chrysemys_picta_bellii
ENSIPUG00000024153	gfm2	93	44.073	ENSCING00000003377	-	96	44.429	Ciona_intestinalis
ENSIPUG00000024153	gfm2	94	42.399	ENSCSAVG00000002108	-	99	49.654	Ciona_savignyi
ENSIPUG00000024153	gfm2	96	68.471	ENSCANG00000042500	GFM2	94	68.471	Colobus_angolensis_palliatus
ENSIPUG00000024153	gfm2	98	67.333	ENSCGRG00001022802	Gfm2	97	67.323	Cricetulus_griseus_chok1gshd
ENSIPUG00000024153	gfm2	98	67.333	ENSCGRG00000001439	Gfm2	97	67.323	Cricetulus_griseus_crigri
ENSIPUG00000024153	gfm2	98	76.627	ENSCSEG00000013115	gfm2	97	76.627	Cynoglossus_semilaevis
ENSIPUG00000024153	gfm2	99	75.297	ENSCVAG00000010057	gfm2	98	75.297	Cyprinodon_variegatus
ENSIPUG00000024153	gfm2	99	78.776	ENSDARG00000005561	gfm2	99	78.776	Danio_rerio
ENSIPUG00000024153	gfm2	96	67.026	ENSDNOG00000005118	GFM2	94	67.026	Dasypus_novemcinctus
ENSIPUG00000024153	gfm2	98	66.003	ENSDORG00000016231	Gfm2	97	66.003	Dipodomys_ordii
ENSIPUG00000024153	gfm2	98	40.395	FBgn0051159	mRRF2	98	44.618	Drosophila_melanogaster
ENSIPUG00000024153	gfm2	76	69.903	ENSETEG00000004090	GFM2	74	69.903	Echinops_telfairi
ENSIPUG00000024153	gfm2	85	81.410	ENSEBUG00000012181	gfm2	94	81.410	Eptatretus_burgeri
ENSIPUG00000024153	gfm2	83	89.552	ENSEASG00005018285	GFM2	86	89.552	Equus_asinus_asinus
ENSIPUG00000024153	gfm2	96	63.058	ENSECAG00000006640	GFM2	94	63.058	Equus_caballus
ENSIPUG00000024153	gfm2	96	51.902	ENSEEUG00000004656	GFM2	99	50.991	Erinaceus_europaeus
ENSIPUG00000024153	gfm2	100	76.762	ENSELUG00000003075	gfm2	98	76.762	Esox_lucius
ENSIPUG00000024153	gfm2	96	68.194	ENSFCAG00000011977	GFM2	94	68.194	Felis_catus
ENSIPUG00000024153	gfm2	99	65.821	ENSFALG00000010106	GFM2	95	65.821	Ficedula_albicollis
ENSIPUG00000024153	gfm2	99	58.768	ENSFDAG00000004993	GFM2	99	66.949	Fukomys_damarensis
ENSIPUG00000024153	gfm2	99	75.626	ENSFHEG00000006210	gfm2	94	77.824	Fundulus_heteroclitus
ENSIPUG00000024153	gfm2	97	76.248	ENSGMOG00000003177	gfm2	96	74.297	Gadus_morhua
ENSIPUG00000024153	gfm2	98	65.613	ENSGALG00000014939	GFM2	98	65.613	Gallus_gallus
ENSIPUG00000024153	gfm2	99	74.934	ENSGAFG00000000439	gfm2	99	74.541	Gambusia_affinis
ENSIPUG00000024153	gfm2	97	77.898	ENSGACG00000015889	gfm2	99	78.775	Gasterosteus_aculeatus
ENSIPUG00000024153	gfm2	96	69.116	ENSGAGG00000012347	GFM2	94	69.116	Gopherus_agassizii
ENSIPUG00000024153	gfm2	95	66.484	ENSGGOG00000013739	GFM2	99	63.229	Gorilla_gorilla
ENSIPUG00000024153	gfm2	98	76.636	ENSHBUG00000011021	gfm2	97	76.636	Haplochromis_burtoni
ENSIPUG00000024153	gfm2	95	68.088	ENSHGLG00000000419	GFM2	99	68.245	Heterocephalus_glaber_female
ENSIPUG00000024153	gfm2	96	67.751	ENSHGLG00100018383	GFM2	99	68.245	Heterocephalus_glaber_male
ENSIPUG00000024153	gfm2	98	68.684	ENSHCOG00000008208	gfm2	96	68.158	Hippocampus_comes
ENSIPUG00000024153	gfm2	97	67.782	ENSSTOG00000007931	GFM2	95	68.714	Ictidomys_tridecemlineatus
ENSIPUG00000024153	gfm2	96	68.451	ENSJJAG00000024278	Gfm2	94	68.451	Jaculus_jaculus
ENSIPUG00000024153	gfm2	98	76.502	ENSKMAG00000013277	gfm2	97	76.502	Kryptolebias_marmoratus
ENSIPUG00000024153	gfm2	99	76.354	ENSLBEG00000020327	gfm2	98	76.354	Labrus_bergylta
ENSIPUG00000024153	gfm2	97	70.470	ENSLACG00000004622	GFM2	95	70.470	Latimeria_chalumnae
ENSIPUG00000024153	gfm2	97	74.064	ENSLOCG00000005368	gfm2	99	73.965	Lepisosteus_oculatus
ENSIPUG00000024153	gfm2	96	68.371	ENSLAFG00000018575	GFM2	94	68.371	Loxodonta_africana
ENSIPUG00000024153	gfm2	96	68.471	ENSMFAG00000039713	GFM2	94	68.471	Macaca_fascicularis
ENSIPUG00000024153	gfm2	96	68.336	ENSMMUG00000019998	GFM2	97	68.336	Macaca_mulatta
ENSIPUG00000024153	gfm2	96	68.336	ENSMNEG00000034666	GFM2	94	68.336	Macaca_nemestrina
ENSIPUG00000024153	gfm2	96	68.471	ENSMLEG00000038075	GFM2	94	68.471	Mandrillus_leucophaeus
ENSIPUG00000024153	gfm2	97	78.108	ENSMAMG00000000452	gfm2	100	78.726	Mastacembelus_armatus
ENSIPUG00000024153	gfm2	98	76.636	ENSMZEG00005004469	gfm2	97	76.636	Maylandia_zebra
ENSIPUG00000024153	gfm2	99	63.233	ENSMGAG00000015100	GFM2	98	63.233	Meleagris_gallopavo
ENSIPUG00000024153	gfm2	95	69.602	ENSMAUG00000022103	Gfm2	93	69.602	Mesocricetus_auratus
ENSIPUG00000024153	gfm2	98	67.323	ENSMICG00000000749	GFM2	97	67.323	Microcebus_murinus
ENSIPUG00000024153	gfm2	62	72.591	ENSMOCG00000019032	-	95	68.102	Microtus_ochrogaster
ENSIPUG00000024153	gfm2	98	68.026	ENSMOCG00000004402	-	95	71.739	Microtus_ochrogaster
ENSIPUG00000024153	gfm2	95	75.205	ENSMMOG00000004758	gfm2	99	74.110	Mola_mola
ENSIPUG00000024153	gfm2	96	68.521	ENSMODG00000001892	GFM2	94	68.521	Monodelphis_domestica
ENSIPUG00000024153	gfm2	96	76.630	ENSMALG00000010323	gfm2	95	76.630	Monopterus_albus
ENSIPUG00000024153	gfm2	96	69.512	MGP_CAROLIEiJ_G0018814	Gfm2	94	69.512	Mus_caroli
ENSIPUG00000024153	gfm2	99	66.887	ENSMUSG00000021666	Gfm2	97	67.408	Mus_musculus
ENSIPUG00000024153	gfm2	96	68.564	MGP_PahariEiJ_G0015889	Gfm2	94	68.564	Mus_pahari
ENSIPUG00000024153	gfm2	99	66.755	MGP_SPRETEiJ_G0019696	Gfm2	97	67.102	Mus_spretus
ENSIPUG00000024153	gfm2	93	65.014	ENSMPUG00000005688	GFM2	99	65.014	Mustela_putorius_furo
ENSIPUG00000024153	gfm2	96	68.237	ENSMLUG00000004761	GFM2	94	68.237	Myotis_lucifugus
ENSIPUG00000024153	gfm2	99	66.888	ENSNGAG00000013586	Gfm2	94	68.614	Nannospalax_galili
ENSIPUG00000024153	gfm2	98	74.670	ENSNBRG00000009181	gfm2	99	74.670	Neolamprologus_brichardi
ENSIPUG00000024153	gfm2	95	69.031	ENSNLEG00000004979	GFM2	99	63.718	Nomascus_leucogenys
ENSIPUG00000024153	gfm2	77	86.250	ENSMEUG00000007885	-	73	86.250	Notamacropus_eugenii
ENSIPUG00000024153	gfm2	88	70.464	ENSOPRG00000001846	GFM2	94	60.705	Ochotona_princeps
ENSIPUG00000024153	gfm2	98	66.886	ENSODEG00000002193	GFM2	99	68.414	Octodon_degus
ENSIPUG00000024153	gfm2	98	76.903	ENSONIG00000011183	gfm2	97	76.903	Oreochromis_niloticus
ENSIPUG00000024153	gfm2	99	67.876	ENSOANG00000015776	GFM2	99	67.876	Ornithorhynchus_anatinus
ENSIPUG00000024153	gfm2	96	68.564	ENSOCUG00000005349	GFM2	96	68.564	Oryctolagus_cuniculus
ENSIPUG00000024153	gfm2	96	76.630	ENSORLG00000003360	gfm2	97	76.630	Oryzias_latipes
ENSIPUG00000024153	gfm2	96	73.212	ENSORLG00020011110	gfm2	99	76.204	Oryzias_latipes_hni
ENSIPUG00000024153	gfm2	96	76.766	ENSORLG00015018196	gfm2	99	76.487	Oryzias_latipes_hsok
ENSIPUG00000024153	gfm2	96	76.766	ENSOMEG00000013774	gfm2	97	76.766	Oryzias_melastigma
ENSIPUG00000024153	gfm2	96	68.514	ENSOGAG00000008961	GFM2	95	68.514	Otolemur_garnettii
ENSIPUG00000024153	gfm2	96	68.059	ENSOARG00000004491	GFM2	94	68.059	Ovis_aries
ENSIPUG00000024153	gfm2	95	69.031	ENSPPAG00000036359	GFM2	99	63.718	Pan_paniscus
ENSIPUG00000024153	gfm2	95	68.428	ENSPPRG00000002671	GFM2	94	68.428	Panthera_pardus
ENSIPUG00000024153	gfm2	96	68.464	ENSPTIG00000021698	GFM2	94	68.464	Panthera_tigris_altaica
ENSIPUG00000024153	gfm2	95	69.031	ENSPTRG00000016989	GFM2	99	63.718	Pan_troglodytes
ENSIPUG00000024153	gfm2	96	68.606	ENSPANG00000013600	GFM2	94	68.606	Papio_anubis
ENSIPUG00000024153	gfm2	95	75.139	ENSPKIG00000018878	gfm2	96	75.139	Paramormyrops_kingsleyae
ENSIPUG00000024153	gfm2	96	69.158	ENSPSIG00000012954	GFM2	98	68.641	Pelodiscus_sinensis
ENSIPUG00000024153	gfm2	96	71.642	ENSPMGG00000016783	gfm2	99	70.963	Periophthalmus_magnuspinnatus
ENSIPUG00000024153	gfm2	98	67.674	ENSPEMG00000000622	Gfm2	96	67.674	Peromyscus_maniculatus_bairdii
ENSIPUG00000024153	gfm2	88	58.370	ENSPMAG00000000472	gfm2	99	58.806	Petromyzon_marinus
ENSIPUG00000024153	gfm2	63	63.732	ENSPCIG00000020810	-	82	63.732	Phascolarctos_cinereus
ENSIPUG00000024153	gfm2	99	75.594	ENSPFOG00000012381	gfm2	98	75.594	Poecilia_formosa
ENSIPUG00000024153	gfm2	99	75.726	ENSPLAG00000014750	gfm2	98	75.726	Poecilia_latipinna
ENSIPUG00000024153	gfm2	99	76.121	ENSPMEG00000005813	gfm2	99	77.652	Poecilia_mexicana
ENSIPUG00000024153	gfm2	99	75.462	ENSPREG00000021026	gfm2	96	77.131	Poecilia_reticulata
ENSIPUG00000024153	gfm2	95	69.031	ENSPPYG00000015556	GFM2	92	68.989	Pongo_abelii
ENSIPUG00000024153	gfm2	96	61.373	ENSPCAG00000015284	GFM2	95	61.373	Procavia_capensis
ENSIPUG00000024153	gfm2	98	67.323	ENSPCOG00000022606	GFM2	97	67.323	Propithecus_coquereli
ENSIPUG00000024153	gfm2	96	68.464	ENSPVAG00000005391	GFM2	95	68.464	Pteropus_vampyrus
ENSIPUG00000024153	gfm2	98	76.101	ENSPNYG00000001950	gfm2	97	76.101	Pundamilia_nyererei
ENSIPUG00000024153	gfm2	100	85.344	ENSPNAG00000018467	gfm2	100	85.344	Pygocentrus_nattereri
ENSIPUG00000024153	gfm2	98	66.360	ENSRNOG00000025285	Gfm2	97	66.360	Rattus_norvegicus
ENSIPUG00000024153	gfm2	96	68.200	ENSRBIG00000040962	GFM2	99	63.239	Rhinopithecus_bieti
ENSIPUG00000024153	gfm2	96	68.471	ENSRROG00000036459	GFM2	99	63.496	Rhinopithecus_roxellana
ENSIPUG00000024153	gfm2	92	33.714	YJL102W	-	94	34.391	Saccharomyces_cerevisiae
ENSIPUG00000024153	gfm2	96	68.919	ENSSBOG00000021848	GFM2	94	68.919	Saimiri_boliviensis_boliviensis
ENSIPUG00000024153	gfm2	99	65.349	ENSSHAG00000017593	GFM2	95	67.794	Sarcophilus_harrisii
ENSIPUG00000024153	gfm2	99	74.672	ENSSFOG00015016059	gfm2	100	74.069	Scleropages_formosus
ENSIPUG00000024153	gfm2	99	76.680	ENSSMAG00000010773	gfm2	99	78.455	Scophthalmus_maximus
ENSIPUG00000024153	gfm2	95	78.022	ENSSDUG00000021273	gfm2	99	78.022	Seriola_dumerili
ENSIPUG00000024153	gfm2	85	38.543	ENSSLDG00000000387	-	96	38.543	Seriola_lalandi_dorsalis
ENSIPUG00000024153	gfm2	99	76.471	ENSSLDG00000014952	gfm2	99	78.398	Seriola_lalandi_dorsalis
ENSIPUG00000024153	gfm2	88	64.497	ENSSARG00000009381	GFM2	86	64.497	Sorex_araneus
ENSIPUG00000024153	gfm2	96	62.210	ENSSPUG00000000593	GFM2	91	62.210	Sphenodon_punctatus
ENSIPUG00000024153	gfm2	97	78.273	ENSSPAG00000014163	gfm2	96	78.947	Stegastes_partitus
ENSIPUG00000024153	gfm2	99	67.717	ENSSSCG00000014074	GFM2	99	65.912	Sus_scrofa
ENSIPUG00000024153	gfm2	96	66.712	ENSTGUG00000005985	GFM2	94	66.712	Taeniopygia_guttata
ENSIPUG00000024153	gfm2	98	73.810	ENSTRUG00000018513	gfm2	99	72.892	Takifugu_rubripes
ENSIPUG00000024153	gfm2	95	70.645	ENSTNIG00000013438	gfm2	99	70.645	Tetraodon_nigroviridis
ENSIPUG00000024153	gfm2	92	62.989	ENSTBEG00000012713	GFM2	97	62.989	Tupaia_belangeri
ENSIPUG00000024153	gfm2	99	62.901	ENSTTRG00000005188	GFM2	99	62.901	Tursiops_truncatus
ENSIPUG00000024153	gfm2	96	69.054	ENSUMAG00000007328	GFM2	94	69.054	Ursus_maritimus
ENSIPUG00000024153	gfm2	96	54.263	ENSVPAG00000007367	GFM2	95	54.263	Vicugna_pacos
ENSIPUG00000024153	gfm2	96	67.925	ENSVVUG00000009245	GFM2	94	67.925	Vulpes_vulpes
ENSIPUG00000024153	gfm2	93	66.064	ENSXETG00000005076	gfm2	99	66.064	Xenopus_tropicalis
ENSIPUG00000024153	gfm2	95	77.353	ENSXCOG00000015007	gfm2	99	77.291	Xiphophorus_couchianus
ENSIPUG00000024153	gfm2	96	77.069	ENSXMAG00000000772	gfm2	96	77.069	Xiphophorus_maculatus