EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000024299 (Gene tree)
Gene ID: 100528692
Gene Symbol: rnaseh2a
Alias: rnh2a
Full Name: ribonuclease H2 subunit A
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 6445 bases
Position: chr26:15648897-15655341
Accession: 100528692
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000036260	RNase_HII	PF01351.18	5e-50	1	1
ENSIPUP00000036261	RNase_HII	PF01351.18	5e-50	1	1
ENSIPUP00000036259	RNase_HII	PF01351.18	6.9e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000037684	-	1438	XM_017456801	ENSIPUP00000036261	307 (aa)	XP_017312290	A0A2D0Q4K3
ENSIPUT00000037682	-	1496	-	ENSIPUP00000036259	348 (aa)	-	-
ENSIPUT00000037683	-	1834	-	ENSIPUP00000036260	307 (aa)	-	A0A2D0Q4K3

Gene Model

Click here to download ENSIPUG00000024299's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000024299's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000024299	rnaseh2a	100	60.912	ENSG00000104889	RNASEH2A	99	68.116	Homo_sapiens
ENSIPUG00000024299	rnaseh2a	100	84.142	ENSAPOG00000004101	rnaseh2a	100	84.142	Acanthochromis_polyacanthus
ENSIPUG00000024299	rnaseh2a	100	61.889	ENSAMEG00000012323	RNASEH2A	100	61.889	Ailuropoda_melanoleuca
ENSIPUG00000024299	rnaseh2a	83	86.275	ENSACIG00000002658	rnaseh2a	100	86.275	Amphilophus_citrinellus
ENSIPUG00000024299	rnaseh2a	100	82.468	ENSAOCG00000009217	rnaseh2a	100	82.468	Amphiprion_ocellaris
ENSIPUG00000024299	rnaseh2a	100	83.117	ENSAPEG00000022937	rnaseh2a	100	83.117	Amphiprion_percula
ENSIPUG00000024299	rnaseh2a	100	83.117	ENSATEG00000000908	rnaseh2a	100	83.117	Anabas_testudineus
ENSIPUG00000024299	rnaseh2a	100	69.805	ENSACAG00000003338	RNASEH2A	100	69.805	Anolis_carolinensis
ENSIPUG00000024299	rnaseh2a	100	45.886	ENSANAG00000037932	RNASEH2A	100	45.886	Aotus_nancymaae
ENSIPUG00000024299	rnaseh2a	100	81.818	ENSACLG00000009169	rnaseh2a	100	81.818	Astatotilapia_calliptera
ENSIPUG00000024299	rnaseh2a	100	79.479	ENSAMXG00000000436	rnaseh2a	100	79.479	Astyanax_mexicanus
ENSIPUG00000024299	rnaseh2a	100	64.495	ENSBTAG00000009661	RNASEH2A	100	64.495	Bos_taurus
ENSIPUG00000024299	rnaseh2a	86	49.442	WBGene00004383	rnh-2	91	49.442	Caenorhabditis_elegans
ENSIPUG00000024299	rnaseh2a	100	60.450	ENSCJAG00000004873	RNASEH2A	100	60.450	Callithrix_jacchus
ENSIPUG00000024299	rnaseh2a	100	62.541	ENSCAFG00000017159	RNASEH2A	100	62.541	Canis_familiaris
ENSIPUG00000024299	rnaseh2a	100	62.541	ENSCAFG00020005190	RNASEH2A	60	62.541	Canis_lupus_dingo
ENSIPUG00000024299	rnaseh2a	100	63.961	ENSCHIG00000014460	RNASEH2A	100	63.961	Capra_hircus
ENSIPUG00000024299	rnaseh2a	100	63.844	ENSTSYG00000025418	RNASEH2A	100	63.844	Carlito_syrichta
ENSIPUG00000024299	rnaseh2a	64	55.224	ENSCAPG00000003411	RNASEH2A	100	55.224	Cavia_aperea
ENSIPUG00000024299	rnaseh2a	100	59.677	ENSCPOG00000038877	RNASEH2A	100	59.677	Cavia_porcellus
ENSIPUG00000024299	rnaseh2a	100	61.238	ENSCCAG00000030453	RNASEH2A	100	61.238	Cebus_capucinus
ENSIPUG00000024299	rnaseh2a	100	60.912	ENSCATG00000029609	RNASEH2A	100	60.912	Cercocebus_atys
ENSIPUG00000024299	rnaseh2a	100	61.564	ENSCLAG00000014930	RNASEH2A	100	61.564	Chinchilla_lanigera
ENSIPUG00000024299	rnaseh2a	100	60.912	ENSCSAG00000006567	RNASEH2A	100	60.912	Chlorocebus_sabaeus
ENSIPUG00000024299	rnaseh2a	100	68.404	ENSCPBG00000023909	RNASEH2A	100	68.404	Chrysemys_picta_bellii
ENSIPUG00000024299	rnaseh2a	99	52.961	ENSCING00000006190	-	99	52.961	Ciona_intestinalis
ENSIPUG00000024299	rnaseh2a	100	50.163	ENSCSAVG00000010904	-	100	50.163	Ciona_savignyi
ENSIPUG00000024299	rnaseh2a	100	61.889	ENSCANG00000027433	RNASEH2A	100	61.889	Colobus_angolensis_palliatus
ENSIPUG00000024299	rnaseh2a	100	62.460	ENSCGRG00001005021	Rnaseh2a	100	62.460	Cricetulus_griseus_chok1gshd
ENSIPUG00000024299	rnaseh2a	100	62.460	ENSCGRG00000016602	Rnaseh2a	93	69.804	Cricetulus_griseus_crigri
ENSIPUG00000024299	rnaseh2a	100	82.736	ENSCSEG00000009842	rnaseh2a	100	82.736	Cynoglossus_semilaevis
ENSIPUG00000024299	rnaseh2a	99	71.148	ENSCVAG00000021203	rnaseh2a	99	71.148	Cyprinodon_variegatus
ENSIPUG00000024299	rnaseh2a	100	90.879	ENSDARG00000018891	rnaseh2a	100	90.879	Danio_rerio
ENSIPUG00000024299	rnaseh2a	86	60.076	ENSDNOG00000036532	RNASEH2A	100	60.076	Dasypus_novemcinctus
ENSIPUG00000024299	rnaseh2a	100	62.541	ENSDORG00000009008	Rnaseh2a	100	62.541	Dipodomys_ordii
ENSIPUG00000024299	rnaseh2a	96	51.839	FBgn0031252	CG13690	85	51.839	Drosophila_melanogaster
ENSIPUG00000024299	rnaseh2a	69	58.216	ENSETEG00000001956	-	100	58.216	Echinops_telfairi
ENSIPUG00000024299	rnaseh2a	94	55.326	ENSEBUG00000003380	rnaseh2a	89	55.326	Eptatretus_burgeri
ENSIPUG00000024299	rnaseh2a	85	67.557	ENSEASG00005004118	RNASEH2A	95	67.557	Equus_asinus_asinus
ENSIPUG00000024299	rnaseh2a	100	61.564	ENSECAG00000007013	RNASEH2A	100	61.564	Equus_caballus
ENSIPUG00000024299	rnaseh2a	100	60.261	ENSEEUG00000008222	RNASEH2A	100	60.261	Erinaceus_europaeus
ENSIPUG00000024299	rnaseh2a	99	85.197	ENSELUG00000023079	rnaseh2a	96	80.567	Esox_lucius
ENSIPUG00000024299	rnaseh2a	100	60.912	ENSFCAG00000000474	RNASEH2A	100	60.912	Felis_catus
ENSIPUG00000024299	rnaseh2a	100	60.261	ENSFDAG00000003595	RNASEH2A	96	66.932	Fukomys_damarensis
ENSIPUG00000024299	rnaseh2a	100	83.062	ENSFHEG00000007682	rnaseh2a	100	83.062	Fundulus_heteroclitus
ENSIPUG00000024299	rnaseh2a	100	81.935	ENSGMOG00000005650	rnaseh2a	100	81.935	Gadus_morhua
ENSIPUG00000024299	rnaseh2a	100	61.364	ENSGALG00000052002	RNASEH2A	76	59.877	Gallus_gallus
ENSIPUG00000024299	rnaseh2a	100	82.085	ENSGAFG00000009624	rnaseh2a	100	82.085	Gambusia_affinis
ENSIPUG00000024299	rnaseh2a	100	80.583	ENSGACG00000016019	rnaseh2a	100	80.583	Gasterosteus_aculeatus
ENSIPUG00000024299	rnaseh2a	100	68.078	ENSGAGG00000013859	RNASEH2A	100	68.078	Gopherus_agassizii
ENSIPUG00000024299	rnaseh2a	100	61.238	ENSGGOG00000005846	RNASEH2A	100	61.238	Gorilla_gorilla
ENSIPUG00000024299	rnaseh2a	92	85.053	ENSHBUG00000005267	rnaseh2a	97	85.053	Haplochromis_burtoni
ENSIPUG00000024299	rnaseh2a	100	59.609	ENSHGLG00000018801	RNASEH2A	100	59.609	Heterocephalus_glaber_female
ENSIPUG00000024299	rnaseh2a	100	59.935	ENSHGLG00100015773	RNASEH2A	100	59.935	Heterocephalus_glaber_male
ENSIPUG00000024299	rnaseh2a	100	83.062	ENSHCOG00000016593	rnaseh2a	100	83.062	Hippocampus_comes
ENSIPUG00000024299	rnaseh2a	100	61.290	ENSSTOG00000006224	RNASEH2A	99	68.627	Ictidomys_tridecemlineatus
ENSIPUG00000024299	rnaseh2a	100	62.662	ENSJJAG00000017547	Rnaseh2a	100	62.662	Jaculus_jaculus
ENSIPUG00000024299	rnaseh2a	100	82.410	ENSKMAG00000019829	rnaseh2a	100	82.410	Kryptolebias_marmoratus
ENSIPUG00000024299	rnaseh2a	100	81.230	ENSLBEG00000020494	rnaseh2a	100	81.230	Labrus_bergylta
ENSIPUG00000024299	rnaseh2a	83	69.020	ENSLACG00000007789	RNASEH2A	100	68.482	Latimeria_chalumnae
ENSIPUG00000024299	rnaseh2a	100	79.805	ENSLOCG00000007890	rnaseh2a	100	79.612	Lepisosteus_oculatus
ENSIPUG00000024299	rnaseh2a	100	62.215	ENSLAFG00000015571	RNASEH2A	100	62.215	Loxodonta_africana
ENSIPUG00000024299	rnaseh2a	100	60.912	ENSMFAG00000002011	RNASEH2A	100	60.912	Macaca_fascicularis
ENSIPUG00000024299	rnaseh2a	100	60.912	ENSMMUG00000005690	RNASEH2A	100	60.912	Macaca_mulatta
ENSIPUG00000024299	rnaseh2a	100	60.586	ENSMNEG00000033054	RNASEH2A	100	60.586	Macaca_nemestrina
ENSIPUG00000024299	rnaseh2a	100	60.586	ENSMLEG00000043654	RNASEH2A	100	60.586	Mandrillus_leucophaeus
ENSIPUG00000024299	rnaseh2a	100	82.524	ENSMAMG00000003062	rnaseh2a	98	85.305	Mastacembelus_armatus
ENSIPUG00000024299	rnaseh2a	100	81.169	ENSMZEG00005023857	rnaseh2a	100	81.169	Maylandia_zebra
ENSIPUG00000024299	rnaseh2a	55	57.396	ENSMAUG00000021740	-	100	57.396	Mesocricetus_auratus
ENSIPUG00000024299	rnaseh2a	100	61.564	ENSMICG00000016430	RNASEH2A	100	61.564	Microcebus_murinus
ENSIPUG00000024299	rnaseh2a	100	61.812	ENSMOCG00000017408	Rnaseh2a	100	61.812	Microtus_ochrogaster
ENSIPUG00000024299	rnaseh2a	83	83.529	ENSMMOG00000008447	rnaseh2a	100	83.529	Mola_mola
ENSIPUG00000024299	rnaseh2a	100	69.677	ENSMODG00000006997	RNASEH2A	100	69.677	Monodelphis_domestica
ENSIPUG00000024299	rnaseh2a	100	84.142	ENSMALG00000021607	rnaseh2a	100	84.142	Monopterus_albus
ENSIPUG00000024299	rnaseh2a	100	43.590	MGP_CAROLIEiJ_G0031319	-	100	70.370	Mus_caroli
ENSIPUG00000024299	rnaseh2a	100	61.489	ENSMUSG00000052926	Rnaseh2a	100	70.370	Mus_musculus
ENSIPUG00000024299	rnaseh2a	100	60.261	MGP_PahariEiJ_G0022924	Rnaseh2a	100	70.370	Mus_pahari
ENSIPUG00000024299	rnaseh2a	100	62.136	MGP_SPRETEiJ_G0032438	Rnaseh2a	100	70.370	Mus_spretus
ENSIPUG00000024299	rnaseh2a	100	62.541	ENSMPUG00000004586	RNASEH2A	100	62.541	Mustela_putorius_furo
ENSIPUG00000024299	rnaseh2a	100	62.866	ENSMLUG00000012723	RNASEH2A	100	62.866	Myotis_lucifugus
ENSIPUG00000024299	rnaseh2a	100	59.609	ENSNGAG00000017988	Rnaseh2a	100	59.609	Nannospalax_galili
ENSIPUG00000024299	rnaseh2a	100	82.143	ENSNBRG00000018731	rnaseh2a	100	82.143	Neolamprologus_brichardi
ENSIPUG00000024299	rnaseh2a	100	61.238	ENSNLEG00000012806	RNASEH2A	100	61.238	Nomascus_leucogenys
ENSIPUG00000024299	rnaseh2a	69	74.648	ENSMEUG00000006001	RNASEH2A	100	74.648	Notamacropus_eugenii
ENSIPUG00000024299	rnaseh2a	100	51.792	ENSOPRG00000004811	RNASEH2A	100	51.792	Ochotona_princeps
ENSIPUG00000024299	rnaseh2a	100	61.238	ENSODEG00000009772	RNASEH2A	100	61.238	Octodon_degus
ENSIPUG00000024299	rnaseh2a	100	81.494	ENSONIG00000018033	rnaseh2a	99	81.494	Oreochromis_niloticus
ENSIPUG00000024299	rnaseh2a	100	64.286	ENSOANG00000009079	RNASEH2A	100	64.286	Ornithorhynchus_anatinus
ENSIPUG00000024299	rnaseh2a	100	81.107	ENSORLG00000004042	rnaseh2a	100	81.107	Oryzias_latipes
ENSIPUG00000024299	rnaseh2a	100	81.107	ENSORLG00020009483	rnaseh2a	100	81.107	Oryzias_latipes_hni
ENSIPUG00000024299	rnaseh2a	100	81.494	ENSORLG00015007548	rnaseh2a	100	81.494	Oryzias_latipes_hsok
ENSIPUG00000024299	rnaseh2a	100	81.494	ENSOMEG00000016454	rnaseh2a	100	81.494	Oryzias_melastigma
ENSIPUG00000024299	rnaseh2a	100	60.586	ENSOGAG00000012214	RNASEH2A	100	60.586	Otolemur_garnettii
ENSIPUG00000024299	rnaseh2a	100	63.844	ENSOARG00000010721	RNASEH2A	100	63.844	Ovis_aries
ENSIPUG00000024299	rnaseh2a	100	61.238	ENSPPAG00000028092	RNASEH2A	100	61.238	Pan_paniscus
ENSIPUG00000024299	rnaseh2a	100	60.912	ENSPPRG00000010585	RNASEH2A	100	60.912	Panthera_pardus
ENSIPUG00000024299	rnaseh2a	100	60.912	ENSPTIG00000013366	RNASEH2A	100	60.912	Panthera_tigris_altaica
ENSIPUG00000024299	rnaseh2a	100	60.912	ENSPTRG00000010542	RNASEH2A	100	60.912	Pan_troglodytes
ENSIPUG00000024299	rnaseh2a	100	60.912	ENSPANG00000034495	RNASEH2A	100	60.912	Papio_anubis
ENSIPUG00000024299	rnaseh2a	100	83.388	ENSPKIG00000009756	rnaseh2a	100	83.388	Paramormyrops_kingsleyae
ENSIPUG00000024299	rnaseh2a	66	69.802	ENSPSIG00000012039	RNASEH2A	100	69.802	Pelodiscus_sinensis
ENSIPUG00000024299	rnaseh2a	83	81.961	ENSPMGG00000023392	rnaseh2a	100	81.961	Periophthalmus_magnuspinnatus
ENSIPUG00000024299	rnaseh2a	100	62.136	ENSPEMG00000018009	Rnaseh2a	100	62.136	Peromyscus_maniculatus_bairdii
ENSIPUG00000024299	rnaseh2a	98	63.725	ENSPMAG00000009060	rnaseh2a	98	65.686	Petromyzon_marinus
ENSIPUG00000024299	rnaseh2a	100	70.968	ENSPCIG00000014119	RNASEH2A	100	70.968	Phascolarctos_cinereus
ENSIPUG00000024299	rnaseh2a	100	82.410	ENSPFOG00000012627	rnaseh2a	100	79.355	Poecilia_formosa
ENSIPUG00000024299	rnaseh2a	68	79.327	ENSPLAG00000018723	-	90	79.327	Poecilia_latipinna
ENSIPUG00000024299	rnaseh2a	83	85.882	ENSPLAG00000015901	rnaseh2a	100	85.882	Poecilia_latipinna
ENSIPUG00000024299	rnaseh2a	83	86.275	ENSPMEG00000000647	rnaseh2a	100	86.275	Poecilia_mexicana
ENSIPUG00000024299	rnaseh2a	68	79.808	ENSPMEG00000009032	-	93	79.808	Poecilia_mexicana
ENSIPUG00000024299	rnaseh2a	100	79.153	ENSPREG00000015015	rnaseh2a	100	79.153	Poecilia_reticulata
ENSIPUG00000024299	rnaseh2a	100	60.714	ENSPPYG00000009608	RNASEH2A	100	60.714	Pongo_abelii
ENSIPUG00000024299	rnaseh2a	100	62.215	ENSPCAG00000015319	RNASEH2A	100	62.215	Procavia_capensis
ENSIPUG00000024299	rnaseh2a	100	61.889	ENSPCOG00000003686	RNASEH2A	100	61.889	Propithecus_coquereli
ENSIPUG00000024299	rnaseh2a	100	49.186	ENSPVAG00000014703	RNASEH2A	100	49.186	Pteropus_vampyrus
ENSIPUG00000024299	rnaseh2a	100	75.484	ENSPNYG00000023986	rnaseh2a	100	75.484	Pundamilia_nyererei
ENSIPUG00000024299	rnaseh2a	100	92.182	ENSPNAG00000021017	rnaseh2a	100	92.182	Pygocentrus_nattereri
ENSIPUG00000024299	rnaseh2a	100	61.165	ENSRNOG00000003504	Rnaseh2a	100	61.165	Rattus_norvegicus
ENSIPUG00000024299	rnaseh2a	100	61.564	ENSRBIG00000023554	RNASEH2A	100	61.564	Rhinopithecus_bieti
ENSIPUG00000024299	rnaseh2a	100	61.564	ENSRROG00000043799	RNASEH2A	100	61.564	Rhinopithecus_roxellana
ENSIPUG00000024299	rnaseh2a	86	40.502	YNL072W	RNH201	93	39.661	Saccharomyces_cerevisiae
ENSIPUG00000024299	rnaseh2a	100	61.415	ENSSBOG00000033164	RNASEH2A	100	61.415	Saimiri_boliviensis_boliviensis
ENSIPUG00000024299	rnaseh2a	100	69.551	ENSSHAG00000015552	RNASEH2A	100	69.551	Sarcophilus_harrisii
ENSIPUG00000024299	rnaseh2a	100	85.016	ENSSFOG00015009692	rnaseh2a	100	85.016	Scleropages_formosus
ENSIPUG00000024299	rnaseh2a	100	80.519	ENSSMAG00000013986	rnaseh2a	100	80.519	Scophthalmus_maximus
ENSIPUG00000024299	rnaseh2a	92	84.698	ENSSDUG00000005280	rnaseh2a	98	83.566	Seriola_dumerili
ENSIPUG00000024299	rnaseh2a	100	81.169	ENSSLDG00000023766	rnaseh2a	100	81.169	Seriola_lalandi_dorsalis
ENSIPUG00000024299	rnaseh2a	100	82.143	ENSSPAG00000012769	rnaseh2a	100	82.143	Stegastes_partitus
ENSIPUG00000024299	rnaseh2a	100	62.541	ENSSSCG00000013737	RNASEH2A	100	62.541	Sus_scrofa
ENSIPUG00000024299	rnaseh2a	100	79.032	ENSTRUG00000000049	rnaseh2a	100	79.032	Takifugu_rubripes
ENSIPUG00000024299	rnaseh2a	100	79.870	ENSTNIG00000004533	rnaseh2a	99	79.870	Tetraodon_nigroviridis
ENSIPUG00000024299	rnaseh2a	69	70.892	ENSTTRG00000003592	RNASEH2A	100	70.892	Tursiops_truncatus
ENSIPUG00000024299	rnaseh2a	100	61.564	ENSUAMG00000019593	RNASEH2A	99	64.286	Ursus_americanus
ENSIPUG00000024299	rnaseh2a	76	68.966	ENSUMAG00000006254	-	73	68.966	Ursus_maritimus
ENSIPUG00000024299	rnaseh2a	99	69.737	ENSXETG00000004762	rnaseh2a	99	69.508	Xenopus_tropicalis
ENSIPUG00000024299	rnaseh2a	100	81.759	ENSXCOG00000013485	rnaseh2a	100	81.759	Xiphophorus_couchianus
ENSIPUG00000024299	rnaseh2a	100	81.433	ENSXMAG00000006953	rnaseh2a	100	81.433	Xiphophorus_maculatus