EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000024397 (Gene tree)
Gene ID: 108278838
Gene Symbol: ncbp3
Alias: zgc:55870
Full Name: nuclear cap binding subunit 3
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 15001 bases
Position: chr18:14543921-14558921
Accession: 108278838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000036418	NCBP3	PF10309.9	6.5e-21	1	1
ENSIPUP00000036417	NCBP3	PF10309.9	8.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000037844	-	5471	XM_017492460	ENSIPUP00000036417	685 (aa)	XP_017347949	A0A2D0SZ42
ENSIPUT00000037845	-	1770	-	ENSIPUP00000036418	589 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000024397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000024397's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000024397	ncbp3	98	60.095	ENSG00000074356	NCBP3	98	57.827	Homo_sapiens
ENSIPUG00000024397	ncbp3	99	69.294	ENSAPOG00000020809	ncbp3	95	81.183	Acanthochromis_polyacanthus
ENSIPUG00000024397	ncbp3	98	58.202	ENSAMEG00000009372	NCBP3	92	57.094	Ailuropoda_melanoleuca
ENSIPUG00000024397	ncbp3	98	65.552	ENSACIG00000024257	ncbp3	98	65.494	Amphilophus_citrinellus
ENSIPUG00000024397	ncbp3	99	69.408	ENSAPEG00000020857	ncbp3	95	80.645	Amphiprion_percula
ENSIPUG00000024397	ncbp3	98	67.779	ENSATEG00000010801	ncbp3	99	67.634	Anabas_testudineus
ENSIPUG00000024397	ncbp3	91	58.758	ENSAPLG00000007373	NCBP3	98	58.639	Anas_platyrhynchos
ENSIPUG00000024397	ncbp3	99	42.358	ENSANAG00000020550	-	88	48.200	Aotus_nancymaae
ENSIPUG00000024397	ncbp3	91	58.773	ENSANAG00000024918	-	91	58.333	Aotus_nancymaae
ENSIPUG00000024397	ncbp3	99	65.645	ENSACLG00000000455	ncbp3	98	65.303	Astatotilapia_calliptera
ENSIPUG00000024397	ncbp3	98	88.670	ENSAMXG00000005968	ncbp3	98	80.917	Astyanax_mexicanus
ENSIPUG00000024397	ncbp3	98	58.909	ENSBTAG00000016621	NCBP3	98	57.903	Bos_taurus
ENSIPUG00000024397	ncbp3	97	58.654	ENSCAFG00000019371	NCBP3	95	56.352	Canis_familiaris
ENSIPUG00000024397	ncbp3	97	58.654	ENSCAFG00020008143	NCBP3	95	56.352	Canis_lupus_dingo
ENSIPUG00000024397	ncbp3	100	59.464	ENSCHIG00000009002	NCBP3	98	58.293	Capra_hircus
ENSIPUG00000024397	ncbp3	98	59.713	ENSTSYG00000008184	NCBP3	98	57.987	Carlito_syrichta
ENSIPUG00000024397	ncbp3	88	59.155	ENSCAPG00000016045	NCBP3	95	57.996	Cavia_aperea
ENSIPUG00000024397	ncbp3	98	59.300	ENSCPOG00000015529	NCBP3	98	57.188	Cavia_porcellus
ENSIPUG00000024397	ncbp3	98	59.777	ENSCCAG00000021154	NCBP3	98	57.668	Cebus_capucinus
ENSIPUG00000024397	ncbp3	97	58.842	ENSCATG00000013041	NCBP3	95	56.866	Cercocebus_atys
ENSIPUG00000024397	ncbp3	98	59.615	ENSCLAG00000012229	NCBP3	98	57.581	Chinchilla_lanigera
ENSIPUG00000024397	ncbp3	98	56.757	ENSCSAG00000013543	NCBP3	98	54.792	Chlorocebus_sabaeus
ENSIPUG00000024397	ncbp3	98	55.840	ENSCHOG00000012323	NCBP3	98	53.055	Choloepus_hoffmanni
ENSIPUG00000024397	ncbp3	100	59.429	ENSCPBG00000014824	NCBP3	98	60.000	Chrysemys_picta_bellii
ENSIPUG00000024397	ncbp3	98	54.633	ENSCANG00000033561	NCBP3	98	53.997	Colobus_angolensis_palliatus
ENSIPUG00000024397	ncbp3	98	59.520	ENSCGRG00001018538	Ncbp3	98	57.649	Cricetulus_griseus_chok1gshd
ENSIPUG00000024397	ncbp3	87	59.571	ENSCGRG00000015075	Ncbp3	98	58.318	Cricetulus_griseus_crigri
ENSIPUG00000024397	ncbp3	99	64.154	ENSCSEG00000006375	ncbp3	99	64.017	Cynoglossus_semilaevis
ENSIPUG00000024397	ncbp3	99	60.699	ENSCVAG00000020563	ncbp3	98	62.297	Cyprinodon_variegatus
ENSIPUG00000024397	ncbp3	98	74.170	ENSDARG00000044597	ncbp3	98	73.913	Danio_rerio
ENSIPUG00000024397	ncbp3	97	59.742	ENSDNOG00000006490	NCBP3	95	56.331	Dasypus_novemcinctus
ENSIPUG00000024397	ncbp3	100	58.998	ENSDORG00000010141	Ncbp3	98	56.592	Dipodomys_ordii
ENSIPUG00000024397	ncbp3	94	39.172	ENSEBUG00000004541	ncbp3	91	37.645	Eptatretus_burgeri
ENSIPUG00000024397	ncbp3	97	59.194	ENSEASG00005013399	NCBP3	95	57.305	Equus_asinus_asinus
ENSIPUG00000024397	ncbp3	97	59.194	ENSECAG00000008444	NCBP3	95	57.305	Equus_caballus
ENSIPUG00000024397	ncbp3	80	50.097	ENSEEUG00000008573	NCBP3	80	52.505	Erinaceus_europaeus
ENSIPUG00000024397	ncbp3	100	68.169	ENSELUG00000009182	ncbp3	98	66.571	Esox_lucius
ENSIPUG00000024397	ncbp3	98	60.256	ENSFCAG00000007929	NCBP3	98	58.521	Felis_catus
ENSIPUG00000024397	ncbp3	92	60.788	ENSFALG00000006704	NCBP3	96	59.545	Ficedula_albicollis
ENSIPUG00000024397	ncbp3	98	60.256	ENSFDAG00000013355	NCBP3	98	58.682	Fukomys_damarensis
ENSIPUG00000024397	ncbp3	83	81.081	ENSFHEG00000005607	ncbp3	78	82.857	Fundulus_heteroclitus
ENSIPUG00000024397	ncbp3	65	88.679	ENSGMOG00000001007	ncbp3	74	88.679	Gadus_morhua
ENSIPUG00000024397	ncbp3	100	58.594	ENSGALG00000002653	NCBP3	98	57.735	Gallus_gallus
ENSIPUG00000024397	ncbp3	83	65.789	ENSGAFG00000008912	ncbp3	80	65.823	Gambusia_affinis
ENSIPUG00000024397	ncbp3	99	60.000	ENSGACG00000020902	ncbp3	97	58.675	Gasterosteus_aculeatus
ENSIPUG00000024397	ncbp3	100	58.796	ENSGAGG00000014490	NCBP3	98	59.128	Gopherus_agassizii
ENSIPUG00000024397	ncbp3	97	60.032	ENSGGOG00000007496	NCBP3	98	57.760	Gorilla_gorilla
ENSIPUG00000024397	ncbp3	99	48.270	ENSHBUG00000019541	ncbp3	98	47.739	Haplochromis_burtoni
ENSIPUG00000024397	ncbp3	98	59.295	ENSHGLG00000015839	NCBP3	98	57.649	Heterocephalus_glaber_female
ENSIPUG00000024397	ncbp3	98	59.295	ENSHGLG00100007256	NCBP3	98	57.649	Heterocephalus_glaber_male
ENSIPUG00000024397	ncbp3	99	62.700	ENSHCOG00000004161	ncbp3	99	63.196	Hippocampus_comes
ENSIPUG00000024397	ncbp3	75	62.553	ENSSTOG00000002101	NCBP3	100	61.064	Ictidomys_tridecemlineatus
ENSIPUG00000024397	ncbp3	98	51.675	ENSJJAG00000000634	Ncbp3	98	49.521	Jaculus_jaculus
ENSIPUG00000024397	ncbp3	96	80.526	ENSKMAG00000001932	ncbp3	99	65.839	Kryptolebias_marmoratus
ENSIPUG00000024397	ncbp3	98	61.000	ENSLBEG00000001558	-	99	60.429	Labrus_bergylta
ENSIPUG00000024397	ncbp3	98	61.836	ENSLBEG00000006036	ncbp3	98	60.709	Labrus_bergylta
ENSIPUG00000024397	ncbp3	98	48.159	ENSLACG00000018791	NCBP3	98	51.708	Latimeria_chalumnae
ENSIPUG00000024397	ncbp3	98	68.429	ENSLOCG00000006706	ncbp3	98	66.861	Lepisosteus_oculatus
ENSIPUG00000024397	ncbp3	98	59.135	ENSLAFG00000002067	NCBP3	98	57.280	Loxodonta_africana
ENSIPUG00000024397	ncbp3	98	59.615	ENSMFAG00000024176	NCBP3	98	58.106	Macaca_fascicularis
ENSIPUG00000024397	ncbp3	98	59.615	ENSMMUG00000008556	NCBP3	98	58.106	Macaca_mulatta
ENSIPUG00000024397	ncbp3	97	58.710	ENSMNEG00000041374	NCBP3	95	57.212	Macaca_nemestrina
ENSIPUG00000024397	ncbp3	87	60.036	ENSMLEG00000034703	NCBP3	98	58.688	Mandrillus_leucophaeus
ENSIPUG00000024397	ncbp3	99	65.722	ENSMAMG00000022461	ncbp3	99	65.854	Mastacembelus_armatus
ENSIPUG00000024397	ncbp3	99	67.105	ENSMZEG00005027802	ncbp3	98	66.444	Maylandia_zebra
ENSIPUG00000024397	ncbp3	94	60.661	ENSMGAG00000004685	NCBP3	96	58.895	Meleagris_gallopavo
ENSIPUG00000024397	ncbp3	98	55.644	ENSMICG00000015798	NCBP3	98	53.514	Microcebus_murinus
ENSIPUG00000024397	ncbp3	98	59.360	ENSMOCG00000016446	Ncbp3	98	57.464	Microtus_ochrogaster
ENSIPUG00000024397	ncbp3	98	65.579	ENSMMOG00000012577	ncbp3	98	65.097	Mola_mola
ENSIPUG00000024397	ncbp3	98	62.715	ENSMALG00000009173	ncbp3	98	61.695	Monopterus_albus
ENSIPUG00000024397	ncbp3	98	59.776	MGP_CAROLIEiJ_G0016684	Ncbp3	98	58.132	Mus_caroli
ENSIPUG00000024397	ncbp3	98	59.776	ENSMUSG00000020783	Ncbp3	98	58.132	Mus_musculus
ENSIPUG00000024397	ncbp3	98	60.256	MGP_PahariEiJ_G0017817	Ncbp3	98	58.454	Mus_pahari
ENSIPUG00000024397	ncbp3	98	59.776	MGP_SPRETEiJ_G0017521	Ncbp3	98	58.132	Mus_spretus
ENSIPUG00000024397	ncbp3	97	58.548	ENSMPUG00000012357	NCBP3	95	56.352	Mustela_putorius_furo
ENSIPUG00000024397	ncbp3	98	60.032	ENSMLUG00000017060	NCBP3	98	57.581	Myotis_lucifugus
ENSIPUG00000024397	ncbp3	98	59.776	ENSNGAG00000020321	Ncbp3	98	58.132	Nannospalax_galili
ENSIPUG00000024397	ncbp3	81	69.782	ENSNBRG00000017354	ncbp3	84	85.000	Neolamprologus_brichardi
ENSIPUG00000024397	ncbp3	98	60.656	ENSNLEG00000017279	NCBP3	98	58.553	Nomascus_leucogenys
ENSIPUG00000024397	ncbp3	69	61.818	ENSMEUG00000015701	-	76	61.818	Notamacropus_eugenii
ENSIPUG00000024397	ncbp3	98	59.164	ENSOPRG00000016925	NCBP3	98	56.522	Ochotona_princeps
ENSIPUG00000024397	ncbp3	98	59.936	ENSODEG00000016617	NCBP3	98	57.649	Octodon_degus
ENSIPUG00000024397	ncbp3	99	64.957	ENSONIG00000007434	ncbp3	99	65.274	Oreochromis_niloticus
ENSIPUG00000024397	ncbp3	100	58.044	ENSOANG00000010109	NCBP3	92	60.312	Ornithorhynchus_anatinus
ENSIPUG00000024397	ncbp3	97	58.738	ENSOCUG00000008045	NCBP3	95	56.840	Oryctolagus_cuniculus
ENSIPUG00000024397	ncbp3	98	64.645	ENSORLG00000013703	ncbp3	98	61.953	Oryzias_latipes
ENSIPUG00000024397	ncbp3	98	64.106	ENSORLG00020011764	ncbp3	98	61.281	Oryzias_latipes_hni
ENSIPUG00000024397	ncbp3	98	64.106	ENSORLG00015018733	ncbp3	98	62.684	Oryzias_latipes_hsok
ENSIPUG00000024397	ncbp3	98	64.697	ENSOMEG00000017858	ncbp3	98	64.749	Oryzias_melastigma
ENSIPUG00000024397	ncbp3	98	59.936	ENSOGAG00000008803	NCBP3	98	57.576	Otolemur_garnettii
ENSIPUG00000024397	ncbp3	81	57.692	ENSOARG00000017750	NCBP3	98	55.819	Ovis_aries
ENSIPUG00000024397	ncbp3	98	60.572	ENSPPAG00000030530	NCBP3	98	58.147	Pan_paniscus
ENSIPUG00000024397	ncbp3	98	59.520	ENSPPRG00000022474	NCBP3	98	56.752	Panthera_pardus
ENSIPUG00000024397	ncbp3	89	59.370	ENSPTIG00000009607	NCBP3	90	57.168	Panthera_tigris_altaica
ENSIPUG00000024397	ncbp3	98	60.476	ENSPTRG00000008578	NCBP3	98	57.576	Pan_troglodytes
ENSIPUG00000024397	ncbp3	98	59.744	ENSPANG00000024364	NCBP3	98	57.760	Papio_anubis
ENSIPUG00000024397	ncbp3	89	66.043	ENSPKIG00000008466	ncbp3	98	61.872	Paramormyrops_kingsleyae
ENSIPUG00000024397	ncbp3	83	56.944	ENSPSIG00000013732	NCBP3	97	55.142	Pelodiscus_sinensis
ENSIPUG00000024397	ncbp3	99	57.143	ENSPMGG00000003344	ncbp3	98	56.618	Periophthalmus_magnuspinnatus
ENSIPUG00000024397	ncbp3	98	59.520	ENSPEMG00000007746	Ncbp3	98	57.488	Peromyscus_maniculatus_bairdii
ENSIPUG00000024397	ncbp3	100	57.716	ENSPCIG00000008605	NCBP3	98	56.940	Phascolarctos_cinereus
ENSIPUG00000024397	ncbp3	89	61.637	ENSPFOG00000000721	ncbp3	97	60.127	Poecilia_formosa
ENSIPUG00000024397	ncbp3	98	63.319	ENSPLAG00000015399	ncbp3	99	62.029	Poecilia_latipinna
ENSIPUG00000024397	ncbp3	98	62.865	ENSPMEG00000000896	ncbp3	99	61.705	Poecilia_mexicana
ENSIPUG00000024397	ncbp3	98	63.050	ENSPREG00000001681	ncbp3	99	61.483	Poecilia_reticulata
ENSIPUG00000024397	ncbp3	97	59.040	ENSPPYG00000007823	NCBP3	95	56.774	Pongo_abelii
ENSIPUG00000024397	ncbp3	100	54.717	ENSPCAG00000012614	NCBP3	98	53.140	Procavia_capensis
ENSIPUG00000024397	ncbp3	98	60.032	ENSPCOG00000016793	NCBP3	98	57.760	Propithecus_coquereli
ENSIPUG00000024397	ncbp3	92	55.026	ENSPVAG00000012746	NCBP3	98	51.713	Pteropus_vampyrus
ENSIPUG00000024397	ncbp3	99	59.801	ENSPNYG00000022677	ncbp3	98	59.483	Pundamilia_nyererei
ENSIPUG00000024397	ncbp3	98	82.301	ENSPNAG00000003219	ncbp3	98	84.218	Pygocentrus_nattereri
ENSIPUG00000024397	ncbp3	98	60.096	ENSRNOG00000018550	Ncbp3	98	58.293	Rattus_norvegicus
ENSIPUG00000024397	ncbp3	98	59.744	ENSRBIG00000033247	NCBP3	98	57.760	Rhinopithecus_bieti
ENSIPUG00000024397	ncbp3	98	59.744	ENSRROG00000043833	NCBP3	99	56.981	Rhinopithecus_roxellana
ENSIPUG00000024397	ncbp3	98	59.809	ENSSBOG00000023178	NCBP3	98	57.853	Saimiri_boliviensis_boliviensis
ENSIPUG00000024397	ncbp3	83	55.166	ENSSHAG00000003466	NCBP3	98	54.635	Sarcophilus_harrisii
ENSIPUG00000024397	ncbp3	100	67.908	ENSSFOG00015005808	ncbp3	98	66.035	Scleropages_formosus
ENSIPUG00000024397	ncbp3	98	63.143	ENSSMAG00000010917	ncbp3	99	64.571	Scophthalmus_maximus
ENSIPUG00000024397	ncbp3	98	79.167	ENSSDUG00000023402	ncbp3	98	68.046	Seriola_dumerili
ENSIPUG00000024397	ncbp3	99	54.961	ENSSLDG00000000742	ncbp3	98	55.485	Seriola_lalandi_dorsalis
ENSIPUG00000024397	ncbp3	88	70.430	ENSSARG00000006634	NCBP3	98	49.525	Sorex_araneus
ENSIPUG00000024397	ncbp3	100	58.176	ENSSPUG00000002240	NCBP3	98	55.854	Sphenodon_punctatus
ENSIPUG00000024397	ncbp3	99	66.480	ENSSPAG00000011223	ncbp3	99	65.434	Stegastes_partitus
ENSIPUG00000024397	ncbp3	98	60.000	ENSSSCG00000017870	NCBP3	98	58.039	Sus_scrofa
ENSIPUG00000024397	ncbp3	98	59.259	ENSTGUG00000005396	NCBP3	98	57.997	Taeniopygia_guttata
ENSIPUG00000024397	ncbp3	99	65.113	ENSTRUG00000003769	ncbp3	98	63.948	Takifugu_rubripes
ENSIPUG00000024397	ncbp3	99	61.978	ENSTNIG00000004776	ncbp3	98	61.890	Tetraodon_nigroviridis
ENSIPUG00000024397	ncbp3	98	54.647	ENSTBEG00000006308	NCBP3	98	52.404	Tupaia_belangeri
ENSIPUG00000024397	ncbp3	88	68.681	ENSTTRG00000005845	NCBP3	98	54.750	Tursiops_truncatus
ENSIPUG00000024397	ncbp3	98	57.632	ENSUAMG00000014043	NCBP3	98	55.660	Ursus_americanus
ENSIPUG00000024397	ncbp3	87	60.252	ENSUMAG00000007519	NCBP3	96	58.633	Ursus_maritimus
ENSIPUG00000024397	ncbp3	97	55.360	ENSVVUG00000026079	NCBP3	95	52.922	Vulpes_vulpes
ENSIPUG00000024397	ncbp3	100	53.096	ENSXETG00000012965	ncbp3	98	52.351	Xenopus_tropicalis
ENSIPUG00000024397	ncbp3	99	62.342	ENSXCOG00000018393	ncbp3	99	76.471	Xiphophorus_couchianus
ENSIPUG00000024397	ncbp3	98	63.596	ENSXMAG00000006849	ncbp3	98	64.611	Xiphophorus_maculatus