EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000024435 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 4054 bases
Position: chr1:25743679-25747732
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000036491	RRM_1	PF00076.22	5.9e-26	1	2
ENSIPUP00000036491	RRM_1	PF00076.22	5.9e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000037920	-	432	-	ENSIPUP00000036491	143 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000024435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000024435's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000024435	-	85	50.000	ENSIPUG00000010020	-	61	50.000
ENSIPUG00000024435	-	85	59.504	ENSIPUG00000024284	-	65	59.504
ENSIPUG00000024435	-	85	68.595	ENSIPUG00000016620	pabpc4	50	68.595
ENSIPUG00000024435	-	85	70.248	ENSIPUG00000010791	-	53	70.248
ENSIPUG00000024435	-	85	85.246	ENSIPUG00000006760	-	61	85.246
ENSIPUG00000024435	-	85	62.810	ENSIPUG00000005537	-	93	62.810
ENSIPUG00000024435	-	85	85.246	ENSIPUG00000006780	-	59	85.246
ENSIPUG00000024435	-	85	65.289	ENSIPUG00000012602	pabpc1l	55	65.289
ENSIPUG00000024435	-	90	30.579	ENSIPUG00000016702	tia1	70	30.579
ENSIPUG00000024435	-	55	34.177	ENSIPUG00000007089	RBM3	53	32.584
ENSIPUG00000024435	-	85	71.074	ENSIPUG00000008848	pabpc1a	51	71.074

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000024435	-	84	54.167	YER165W	-	55	54.167	Saccharomyces_cerevisiae
ENSIPUG00000024435	-	87	60.800	ENSSLDG00000002735	-	87	60.800	Seriola_lalandi_dorsalis