EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000024504 (Gene tree)
Gene ID: -
Gene Symbol: r3hcc1
Alias: si:dkey-191l12.1
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 12732 bases
Position: chr16:4914531-4927262
Accession: ZDB-GENE-091204-146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000036583	R3H	PF01424.22	1.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000038014	-	5360	-	ENSIPUP00000036583	438 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000024504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000024504's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000024504	r3hcc1	87	35.909	ENSG00000104679	R3HCC1	100	46.512	Homo_sapiens
ENSIPUG00000024504	r3hcc1	85	49.005	ENSAPOG00000003616	r3hcc1	91	48.387	Acanthochromis_polyacanthus
ENSIPUG00000024504	r3hcc1	87	36.795	ENSAMEG00000002963	R3HCC1	89	36.242	Ailuropoda_melanoleuca
ENSIPUG00000024504	r3hcc1	87	41.667	ENSACIG00000017144	r3hcc1	99	41.441	Amphilophus_citrinellus
ENSIPUG00000024504	r3hcc1	84	48.737	ENSAOCG00000003945	r3hcc1	97	49.622	Amphiprion_ocellaris
ENSIPUG00000024504	r3hcc1	84	48.737	ENSAPEG00000003613	r3hcc1	97	49.622	Amphiprion_percula
ENSIPUG00000024504	r3hcc1	80	48.010	ENSATEG00000023860	r3hcc1	98	48.010	Anabas_testudineus
ENSIPUG00000024504	r3hcc1	87	36.721	ENSACAG00000016627	R3HCC1	96	37.587	Anolis_carolinensis
ENSIPUG00000024504	r3hcc1	87	35.556	ENSANAG00000036169	R3HCC1	97	34.577	Aotus_nancymaae
ENSIPUG00000024504	r3hcc1	87	35.909	ENSBTAG00000025830	R3HCC1	94	36.073	Bos_taurus
ENSIPUG00000024504	r3hcc1	87	34.452	ENSCJAG00000020118	R3HCC1	97	34.171	Callithrix_jacchus
ENSIPUG00000024504	r3hcc1	91	35.491	ENSCAFG00000009210	R3HCC1	97	35.955	Canis_familiaris
ENSIPUG00000024504	r3hcc1	74	33.777	ENSCAFG00020012870	R3HCC1	86	33.875	Canis_lupus_dingo
ENSIPUG00000024504	r3hcc1	87	34.339	ENSCHIG00000009107	R3HCC1	97	35.991	Capra_hircus
ENSIPUG00000024504	r3hcc1	87	36.427	ENSTSYG00000000511	R3HCC1	75	36.806	Carlito_syrichta
ENSIPUG00000024504	r3hcc1	87	34.335	ENSCPOG00000009696	R3HCC1	98	33.906	Cavia_porcellus
ENSIPUG00000024504	r3hcc1	87	33.860	ENSCCAG00000037811	R3HCC1	97	34.422	Cebus_capucinus
ENSIPUG00000024504	r3hcc1	87	36.591	ENSCATG00000032971	R3HCC1	97	36.410	Cercocebus_atys
ENSIPUG00000024504	r3hcc1	87	39.858	ENSCLAG00000015556	R3HCC1	82	38.915	Chinchilla_lanigera
ENSIPUG00000024504	r3hcc1	87	36.591	ENSCSAG00000016250	R3HCC1	89	35.514	Chlorocebus_sabaeus
ENSIPUG00000024504	r3hcc1	87	37.156	ENSCHOG00000000396	R3HCC1	94	36.927	Choloepus_hoffmanni
ENSIPUG00000024504	r3hcc1	87	36.446	ENSCANG00000029441	R3HCC1	97	35.533	Colobus_angolensis_palliatus
ENSIPUG00000024504	r3hcc1	65	47.260	ENSCGRG00001014977	R3hcc1	72	39.865	Cricetulus_griseus_chok1gshd
ENSIPUG00000024504	r3hcc1	65	47.260	ENSCGRG00000004454	R3hcc1	72	39.865	Cricetulus_griseus_crigri
ENSIPUG00000024504	r3hcc1	84	47.407	ENSCSEG00000005748	r3hcc1	97	46.305	Cynoglossus_semilaevis
ENSIPUG00000024504	r3hcc1	73	39.106	ENSCVAG00000002640	r3hcc1	96	37.430	Cyprinodon_variegatus
ENSIPUG00000024504	r3hcc1	86	50.000	ENSDARG00000099593	r3hcc1	98	49.610	Danio_rerio
ENSIPUG00000024504	r3hcc1	87	37.615	ENSDNOG00000007168	R3HCC1	90	37.615	Dasypus_novemcinctus
ENSIPUG00000024504	r3hcc1	71	44.134	ENSDORG00000026365	R3hcc1	70	43.684	Dipodomys_ordii
ENSIPUG00000024504	r3hcc1	87	31.891	ENSETEG00000001147	R3HCC1	95	33.333	Echinops_telfairi
ENSIPUG00000024504	r3hcc1	87	35.185	ENSEASG00005018782	R3HCC1	78	36.597	Equus_asinus_asinus
ENSIPUG00000024504	r3hcc1	87	35.417	ENSECAG00000025013	R3HCC1	95	36.047	Equus_caballus
ENSIPUG00000024504	r3hcc1	87	37.995	ENSEEUG00000011918	R3HCC1	94	37.529	Erinaceus_europaeus
ENSIPUG00000024504	r3hcc1	82	48.655	ENSELUG00000023650	r3hcc1	99	47.901	Esox_lucius
ENSIPUG00000024504	r3hcc1	87	38.903	ENSFCAG00000012395	R3HCC1	94	35.664	Felis_catus
ENSIPUG00000024504	r3hcc1	62	41.549	ENSFALG00000001646	R3HCC1	53	36.994	Ficedula_albicollis
ENSIPUG00000024504	r3hcc1	87	35.426	ENSFDAG00000001572	R3HCC1	97	34.467	Fukomys_damarensis
ENSIPUG00000024504	r3hcc1	86	39.896	ENSGMOG00000017590	-	100	39.896	Gadus_morhua
ENSIPUG00000024504	r3hcc1	87	48.175	ENSGAFG00000008747	-	92	47.059	Gambusia_affinis
ENSIPUG00000024504	r3hcc1	86	48.309	ENSGACG00000008447	r3hcc1	95	48.068	Gasterosteus_aculeatus
ENSIPUG00000024504	r3hcc1	79	42.308	ENSGAGG00000018009	R3HCC1	56	42.308	Gopherus_agassizii
ENSIPUG00000024504	r3hcc1	87	36.818	ENSGGOG00000013817	R3HCC1	97	36.761	Gorilla_gorilla
ENSIPUG00000024504	r3hcc1	61	66.667	ENSHBUG00000022250	-	76	67.470	Haplochromis_burtoni
ENSIPUG00000024504	r3hcc1	99	33.884	ENSHGLG00000010517	R3HCC1	94	33.954	Heterocephalus_glaber_female
ENSIPUG00000024504	r3hcc1	99	33.884	ENSHGLG00100006388	R3HCC1	94	33.954	Heterocephalus_glaber_male
ENSIPUG00000024504	r3hcc1	87	49.000	ENSHCOG00000011745	r3hcc1	93	49.502	Hippocampus_comes
ENSIPUG00000024504	r3hcc1	87	47.468	ENSSTOG00000027130	R3HCC1	65	47.468	Ictidomys_tridecemlineatus
ENSIPUG00000024504	r3hcc1	87	34.641	ENSJJAG00000013075	R3hcc1	97	34.858	Jaculus_jaculus
ENSIPUG00000024504	r3hcc1	82	46.632	ENSKMAG00000000286	r3hcc1	98	47.150	Kryptolebias_marmoratus
ENSIPUG00000024504	r3hcc1	87	38.679	ENSLACG00000011894	R3HCC1	66	50.360	Latimeria_chalumnae
ENSIPUG00000024504	r3hcc1	90	45.147	ENSLOCG00000015442	r3hcc1	99	47.194	Lepisosteus_oculatus
ENSIPUG00000024504	r3hcc1	65	49.655	ENSLAFG00000016137	R3HCC1	58	49.655	Loxodonta_africana
ENSIPUG00000024504	r3hcc1	87	36.301	ENSMFAG00000032894	R3HCC1	97	36.154	Macaca_fascicularis
ENSIPUG00000024504	r3hcc1	87	34.954	ENSMMUG00000016655	R3HCC1	97	35.323	Macaca_mulatta
ENSIPUG00000024504	r3hcc1	87	36.530	ENSMNEG00000043283	R3HCC1	97	36.410	Macaca_nemestrina
ENSIPUG00000024504	r3hcc1	87	36.009	ENSMLEG00000030147	R3HCC1	97	36.667	Mandrillus_leucophaeus
ENSIPUG00000024504	r3hcc1	82	50.376	ENSMAMG00000018146	r3hcc1	99	48.615	Mastacembelus_armatus
ENSIPUG00000024504	r3hcc1	86	37.232	ENSMGAG00000001356	R3HCC1	89	37.260	Meleagris_gallopavo
ENSIPUG00000024504	r3hcc1	64	47.917	ENSMAUG00000016096	R3hcc1	68	44.000	Mesocricetus_auratus
ENSIPUG00000024504	r3hcc1	87	38.035	ENSMICG00000011146	R3HCC1	97	36.020	Microcebus_murinus
ENSIPUG00000024504	r3hcc1	65	47.945	ENSMOCG00000018508	R3hcc1	73	42.038	Microtus_ochrogaster
ENSIPUG00000024504	r3hcc1	87	32.071	ENSMODG00000016809	-	99	33.178	Monodelphis_domestica
ENSIPUG00000024504	r3hcc1	82	46.939	ENSMALG00000000731	r3hcc1	98	47.449	Monopterus_albus
ENSIPUG00000024504	r3hcc1	64	45.890	MGP_CAROLIEiJ_G0019467	R3hcc1	97	36.866	Mus_caroli
ENSIPUG00000024504	r3hcc1	64	45.890	ENSMUSG00000034194	R3hcc1	74	43.448	Mus_musculus
ENSIPUG00000024504	r3hcc1	66	44.304	MGP_PahariEiJ_G0030484	R3hcc1	64	42.604	Mus_pahari
ENSIPUG00000024504	r3hcc1	64	45.890	MGP_SPRETEiJ_G0020359	R3hcc1	74	43.448	Mus_spretus
ENSIPUG00000024504	r3hcc1	87	36.444	ENSMPUG00000003457	R3HCC1	85	35.650	Mustela_putorius_furo
ENSIPUG00000024504	r3hcc1	86	36.092	ENSMLUG00000000266	R3HCC1	89	36.449	Myotis_lucifugus
ENSIPUG00000024504	r3hcc1	86	48.966	ENSNGAG00000016747	R3hcc1	97	35.570	Nannospalax_galili
ENSIPUG00000024504	r3hcc1	72	81.481	ENSNBRG00000016975	-	82	81.481	Neolamprologus_brichardi
ENSIPUG00000024504	r3hcc1	80	35.062	ENSNLEG00000015944	R3HCC1	82	33.420	Nomascus_leucogenys
ENSIPUG00000024504	r3hcc1	87	37.819	ENSMEUG00000010587	R3HCC1	97	37.559	Notamacropus_eugenii
ENSIPUG00000024504	r3hcc1	87	34.023	ENSOPRG00000013390	R3HCC1	92	37.530	Ochotona_princeps
ENSIPUG00000024504	r3hcc1	87	35.358	ENSODEG00000007529	R3HCC1	97	36.009	Octodon_degus
ENSIPUG00000024504	r3hcc1	87	34.325	ENSOANG00000013877	R3HCC1	95	35.681	Ornithorhynchus_anatinus
ENSIPUG00000024504	r3hcc1	87	37.176	ENSOCUG00000023554	R3HCC1	84	36.993	Oryctolagus_cuniculus
ENSIPUG00000024504	r3hcc1	82	43.883	ENSORLG00000016816	r3hcc1	98	43.351	Oryzias_latipes
ENSIPUG00000024504	r3hcc1	82	43.883	ENSORLG00020012005	r3hcc1	98	43.883	Oryzias_latipes_hni
ENSIPUG00000024504	r3hcc1	82	43.617	ENSORLG00015007018	r3hcc1	98	43.085	Oryzias_latipes_hsok
ENSIPUG00000024504	r3hcc1	82	45.573	ENSOMEG00000000816	r3hcc1	98	46.354	Oryzias_melastigma
ENSIPUG00000024504	r3hcc1	87	36.866	ENSOGAG00000001291	R3HCC1	90	36.073	Otolemur_garnettii
ENSIPUG00000024504	r3hcc1	87	35.616	ENSOARG00000010146	R3HCC1	95	35.581	Ovis_aries
ENSIPUG00000024504	r3hcc1	87	36.425	ENSPPAG00000033165	R3HCC1	97	36.000	Pan_paniscus
ENSIPUG00000024504	r3hcc1	87	36.111	ENSPPRG00000002522	R3HCC1	97	36.215	Panthera_pardus
ENSIPUG00000024504	r3hcc1	79	35.443	ENSPTIG00000011230	R3HCC1	93	35.550	Panthera_tigris_altaica
ENSIPUG00000024504	r3hcc1	87	36.425	ENSPTRG00000020076	R3HCC1	97	35.500	Pan_troglodytes
ENSIPUG00000024504	r3hcc1	87	36.591	ENSPANG00000000453	R3HCC1	97	36.410	Papio_anubis
ENSIPUG00000024504	r3hcc1	78	49.041	ENSPKIG00000020397	-	94	47.814	Paramormyrops_kingsleyae
ENSIPUG00000024504	r3hcc1	78	47.500	ENSPKIG00000014426	-	93	45.730	Paramormyrops_kingsleyae
ENSIPUG00000024504	r3hcc1	87	38.228	ENSPSIG00000017664	R3HCC1	97	38.228	Pelodiscus_sinensis
ENSIPUG00000024504	r3hcc1	52	66.265	ENSPMGG00000007792	r3hcc1	99	40.842	Periophthalmus_magnuspinnatus
ENSIPUG00000024504	r3hcc1	73	42.857	ENSPEMG00000007118	R3hcc1	72	42.857	Peromyscus_maniculatus_bairdii
ENSIPUG00000024504	r3hcc1	78	33.580	ENSPCIG00000022718	-	82	34.250	Phascolarctos_cinereus
ENSIPUG00000024504	r3hcc1	87	47.619	ENSPFOG00000022301	r3hcc1	92	47.143	Poecilia_formosa
ENSIPUG00000024504	r3hcc1	87	47.143	ENSPLAG00000010794	r3hcc1	92	47.129	Poecilia_latipinna
ENSIPUG00000024504	r3hcc1	87	47.619	ENSPMEG00000022515	r3hcc1	92	47.143	Poecilia_mexicana
ENSIPUG00000024504	r3hcc1	87	47.129	ENSPREG00000000713	r3hcc1	91	47.596	Poecilia_reticulata
ENSIPUG00000024504	r3hcc1	79	35.468	ENSPPYG00000018436	R3HCC1	96	34.925	Pongo_abelii
ENSIPUG00000024504	r3hcc1	64	47.222	ENSPCAG00000012229	R3HCC1	64	47.222	Procavia_capensis
ENSIPUG00000024504	r3hcc1	87	36.842	ENSPCOG00000027554	R3HCC1	97	36.962	Propithecus_coquereli
ENSIPUG00000024504	r3hcc1	87	36.281	ENSPVAG00000009829	R3HCC1	94	35.227	Pteropus_vampyrus
ENSIPUG00000024504	r3hcc1	84	61.600	ENSPNAG00000023875	r3hcc1	99	60.695	Pygocentrus_nattereri
ENSIPUG00000024504	r3hcc1	69	41.892	ENSRNOG00000016777	AABR07018321.1	55	43.919	Rattus_norvegicus
ENSIPUG00000024504	r3hcc1	87	36.073	ENSRBIG00000028045	R3HCC1	97	36.410	Rhinopithecus_bieti
ENSIPUG00000024504	r3hcc1	87	36.281	ENSRROG00000031126	R3HCC1	97	36.410	Rhinopithecus_roxellana
ENSIPUG00000024504	r3hcc1	87	35.056	ENSSBOG00000022590	R3HCC1	97	35.035	Saimiri_boliviensis_boliviensis
ENSIPUG00000024504	r3hcc1	53	52.326	ENSSHAG00000016526	-	53	52.326	Sarcophilus_harrisii
ENSIPUG00000024504	r3hcc1	80	52.507	ENSSFOG00015013507	r3hcc1	97	52.861	Scleropages_formosus
ENSIPUG00000024504	r3hcc1	82	47.689	ENSSMAG00000008647	r3hcc1	99	47.317	Scophthalmus_maximus
ENSIPUG00000024504	r3hcc1	87	51.179	ENSSDUG00000022786	r3hcc1	99	50.708	Seriola_dumerili
ENSIPUG00000024504	r3hcc1	87	50.943	ENSSLDG00000019031	r3hcc1	99	50.472	Seriola_lalandi_dorsalis
ENSIPUG00000024504	r3hcc1	85	48.250	ENSSPAG00000013497	r3hcc1	98	46.192	Stegastes_partitus
ENSIPUG00000024504	r3hcc1	92	35.619	ENSSSCG00000039915	-	95	34.812	Sus_scrofa
ENSIPUG00000024504	r3hcc1	87	32.160	ENSSSCG00000037347	-	79	31.926	Sus_scrofa
ENSIPUG00000024504	r3hcc1	84	43.147	ENSTRUG00000015880	r3hcc1	97	42.750	Takifugu_rubripes
ENSIPUG00000024504	r3hcc1	87	34.339	ENSTTRG00000012247	R3HCC1	94	34.112	Tursiops_truncatus
ENSIPUG00000024504	r3hcc1	87	37.104	ENSUAMG00000007344	R3HCC1	97	34.615	Ursus_americanus
ENSIPUG00000024504	r3hcc1	91	36.784	ENSVVUG00000005056	R3HCC1	97	36.547	Vulpes_vulpes
ENSIPUG00000024504	r3hcc1	83	40.909	ENSXCOG00000017626	r3hcc1	89	41.582	Xiphophorus_couchianus
ENSIPUG00000024504	r3hcc1	87	46.265	ENSXMAG00000018375	r3hcc1	92	47.059	Xiphophorus_maculatus