EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000024531 (Gene tree)
Gene ID: 108278725
Gene Symbol: rab34
Alias: si:dkey-220h13.7
Full Name: RAB34%2C member RAS oncogene family
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 10661 bases
Position: chr18:14731937-14742597
Accession: 108278725
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000036628	MMR_HSR1	PF01926.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000038061	-	2347	XM_017492229	ENSIPUP00000036628	255 (aa)	XP_017347718	A0A2D0SZF9

Gene Model

Click here to download ENSIPUG00000024531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000024531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000024531	rab34	63	30.625	ENSIPUG00000010794	rab22a	80	30.625
ENSIPUG00000024531	rab34	80	31.731	ENSIPUG00000006091	RAB11A	93	31.731
ENSIPUG00000024531	rab34	63	36.250	ENSIPUG00000003199	rab13	78	36.250
ENSIPUG00000024531	rab34	65	36.905	ENSIPUG00000015525	-	76	36.905
ENSIPUG00000024531	rab34	63	32.515	ENSIPUG00000007246	rab7a	79	32.515
ENSIPUG00000024531	rab34	65	33.133	ENSIPUG00000020226	RAB15	80	33.133
ENSIPUG00000024531	rab34	65	37.725	ENSIPUG00000011489	Rab35	96	33.990
ENSIPUG00000024531	rab34	62	35.976	ENSIPUG00000010859	rab18b	85	35.976
ENSIPUG00000024531	rab34	63	39.506	ENSIPUG00000020508	rab1ab	78	39.506
ENSIPUG00000024531	rab34	73	34.225	ENSIPUG00000021740	rab6a	86	34.225
ENSIPUG00000024531	rab34	79	33.005	ENSIPUG00000015058	rab6b	93	33.005
ENSIPUG00000024531	rab34	66	40.116	ENSIPUG00000022394	zgc:101559	73	40.116
ENSIPUG00000024531	rab34	63	39.506	ENSIPUG00000017890	Rab1A	79	39.506
ENSIPUG00000024531	rab34	63	30.000	ENSIPUG00000018050	RAB31	81	30.000
ENSIPUG00000024531	rab34	53	35.821	ENSIPUG00000016494	rab23	68	38.621
ENSIPUG00000024531	rab34	51	38.636	ENSIPUG00000020833	rab39b	62	38.636
ENSIPUG00000024531	rab34	63	34.161	ENSIPUG00000012218	RAB25	75	34.161
ENSIPUG00000024531	rab34	52	35.338	ENSIPUG00000016261	RAB19	59	35.338
ENSIPUG00000024531	rab34	65	33.333	ENSIPUG00000007539	rab2a	76	33.333
ENSIPUG00000024531	rab34	79	32.692	ENSIPUG00000011376	rab42a	96	32.692
ENSIPUG00000024531	rab34	56	30.519	ENSIPUG00000018288	RAB20	60	31.410
ENSIPUG00000024531	rab34	62	39.752	ENSIPUG00000017401	rab12	64	39.752
ENSIPUG00000024531	rab34	69	32.203	ENSIPUG00000006126	Rab25	78	32.203
ENSIPUG00000024531	rab34	62	33.333	ENSIPUG00000019927	rab11bb	72	33.333
ENSIPUG00000024531	rab34	80	33.005	ENSIPUG00000024622	rab35	96	33.005
ENSIPUG00000024531	rab34	51	34.328	ENSIPUG00000014035	rab9a	66	34.328
ENSIPUG00000024531	rab34	67	31.429	ENSIPUG00000022445	RAB7A	84	31.429
ENSIPUG00000024531	rab34	63	37.888	ENSIPUG00000019382	rab41	79	35.948
ENSIPUG00000024531	rab34	63	32.500	ENSIPUG00000023392	rab5a	72	32.500
ENSIPUG00000024531	rab34	61	34.615	ENSIPUG00000021401	Rab11a	71	34.615
ENSIPUG00000024531	rab34	65	36.905	ENSIPUG00000007415	rab14	76	36.905
ENSIPUG00000024531	rab34	67	31.765	ENSIPUG00000020082	rab5c	78	31.765
ENSIPUG00000024531	rab34	67	32.571	ENSIPUG00000017200	-	84	32.571
ENSIPUG00000024531	rab34	79	32.020	ENSIPUG00000019237	rab15	90	32.020
ENSIPUG00000024531	rab34	63	39.506	ENSIPUG00000008650	rab1a	78	39.506
ENSIPUG00000024531	rab34	71	34.066	ENSIPUG00000021010	Rab30	89	34.066
ENSIPUG00000024531	rab34	63	36.646	ENSIPUG00000018098	rab6b	76	36.646
ENSIPUG00000024531	rab34	98	45.914	ENSIPUG00000022673	rab36	98	45.914
ENSIPUG00000024531	rab34	65	36.145	ENSIPUG00000024203	rab39ba	77	36.145
ENSIPUG00000024531	rab34	69	36.111	ENSIPUG00000009784	-	81	36.111
ENSIPUG00000024531	rab34	56	30.519	ENSIPUG00000000432	RAB20	60	31.410
ENSIPUG00000024531	rab34	99	63.953	ENSIPUG00000017447	rab34a	99	63.953

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000024531	rab34	88	71.681	ENSAPOG00000019147	rab34b	95	70.202	Acanthochromis_polyacanthus
ENSIPUG00000024531	rab34	99	62.205	ENSACIG00000004859	rab34b	100	62.205	Amphilophus_citrinellus
ENSIPUG00000024531	rab34	99	69.531	ENSAOCG00000007106	rab34b	93	69.531	Amphiprion_ocellaris
ENSIPUG00000024531	rab34	91	69.787	ENSAPEG00000018607	rab34b	86	69.583	Amphiprion_percula
ENSIPUG00000024531	rab34	92	70.588	ENSATEG00000006851	rab34b	93	70.588	Anabas_testudineus
ENSIPUG00000024531	rab34	99	70.312	ENSACLG00000005733	rab34b	97	70.312	Astatotilapia_calliptera
ENSIPUG00000024531	rab34	100	79.457	ENSAMXG00000006018	rab34b	100	79.457	Astyanax_mexicanus
ENSIPUG00000024531	rab34	91	69.787	ENSCSEG00000018133	rab34b	93	69.787	Cynoglossus_semilaevis
ENSIPUG00000024531	rab34	99	77.165	ENSDARG00000010977	rab34b	99	77.165	Danio_rerio
ENSIPUG00000024531	rab34	98	71.373	ENSELUG00000005597	rab34b	98	71.373	Esox_lucius
ENSIPUG00000024531	rab34	98	69.565	ENSFHEG00000004532	rab34b	99	69.565	Fundulus_heteroclitus
ENSIPUG00000024531	rab34	81	71.014	ENSGMOG00000007140	rab34b	100	71.014	Gadus_morhua
ENSIPUG00000024531	rab34	98	68.110	ENSGACG00000020514	rab34b	99	68.110	Gasterosteus_aculeatus
ENSIPUG00000024531	rab34	98	70.916	ENSKMAG00000019341	rab34b	99	70.916	Kryptolebias_marmoratus
ENSIPUG00000024531	rab34	98	68.379	ENSLBEG00000027819	rab34b	99	68.379	Labrus_bergylta
ENSIPUG00000024531	rab34	98	68.627	ENSMAMG00000020214	rab34b	99	68.627	Mastacembelus_armatus
ENSIPUG00000024531	rab34	98	66.008	ENSMMOG00000010936	rab34b	86	66.008	Mola_mola
ENSIPUG00000024531	rab34	95	67.729	ENSMALG00000018499	rab34b	94	67.729	Monopterus_albus
ENSIPUG00000024531	rab34	98	70.751	ENSONIG00000005519	rab34b	99	70.751	Oreochromis_niloticus
ENSIPUG00000024531	rab34	98	71.146	ENSORLG00000003119	rab34b	92	71.146	Oryzias_latipes
ENSIPUG00000024531	rab34	98	71.146	ENSORLG00020016139	rab34b	92	71.146	Oryzias_latipes_hni
ENSIPUG00000024531	rab34	98	71.146	ENSORLG00015000584	rab34b	92	71.146	Oryzias_latipes_hsok
ENSIPUG00000024531	rab34	98	70.751	ENSOMEG00000010334	rab34b	96	72.152	Oryzias_melastigma
ENSIPUG00000024531	rab34	99	70.428	ENSPKIG00000013326	rab34b	99	70.428	Paramormyrops_kingsleyae
ENSIPUG00000024531	rab34	98	68.379	ENSPMGG00000021697	rab34b	99	68.379	Periophthalmus_magnuspinnatus
ENSIPUG00000024531	rab34	98	70.356	ENSPFOG00000011444	rab34b	99	70.356	Poecilia_formosa
ENSIPUG00000024531	rab34	98	70.356	ENSPLAG00000005074	rab34b	99	70.356	Poecilia_latipinna
ENSIPUG00000024531	rab34	98	70.356	ENSPMEG00000013297	rab34b	99	70.356	Poecilia_mexicana
ENSIPUG00000024531	rab34	98	69.960	ENSPREG00000009813	rab34b	99	69.960	Poecilia_reticulata
ENSIPUG00000024531	rab34	99	65.748	ENSPNYG00000017153	rab34b	99	78.531	Pundamilia_nyererei
ENSIPUG00000024531	rab34	92	80.169	ENSPNAG00000015040	rab34b	99	80.169	Pygocentrus_nattereri
ENSIPUG00000024531	rab34	99	70.543	ENSSFOG00015005188	rab34	99	70.543	Scleropages_formosus
ENSIPUG00000024531	rab34	91	72.222	ENSSMAG00000019926	rab34b	99	70.513	Scophthalmus_maximus
ENSIPUG00000024531	rab34	98	69.685	ENSSDUG00000016760	rab34b	79	69.685	Seriola_dumerili
ENSIPUG00000024531	rab34	71	76.503	ENSSLDG00000014812	rab34b	89	76.503	Seriola_lalandi_dorsalis
ENSIPUG00000024531	rab34	98	69.565	ENSSPAG00000002801	rab34b	99	69.565	Stegastes_partitus
ENSIPUG00000024531	rab34	93	70.000	ENSTRUG00000014481	rab34b	97	70.000	Takifugu_rubripes
ENSIPUG00000024531	rab34	98	69.685	ENSTNIG00000016158	rab34b	98	69.685	Tetraodon_nigroviridis