EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000024787 (Gene tree)
Gene ID: 108271181
Gene Symbol: trmt13
Alias: ccdc76|fe24e02|wu:fe24e02|zgc:110839
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 12113 bases
Position: chr10:13216900-13229012
Accession: 108271181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000037015	TRM13	PF05206.14	1.8e-87	1	1
ENSIPUP00000037012	TRM13	PF05206.14	2.4e-37	1	1
ENSIPUP00000037012	zf-U11-48K	PF05253.12	2.6e-10	1	1
ENSIPUP00000037015	zf-U11-48K	PF05253.12	4.1e-10	1	1
ENSIPUP00000037012	zf-TRM13_CCCH	PF11722.8	1e-12	1	1
ENSIPUP00000037015	zf-TRM13_CCCH	PF11722.8	4.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000038459	-	3986	XM_017478549	ENSIPUP00000037015	454 (aa)	XP_017334038	A0A2D0RU60
ENSIPUT00000038456	-	840	-	ENSIPUP00000037012	279 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000024787's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000024787's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000024787	trmt13	98	58.225	ENSG00000122435	TRMT13	95	57.267	Homo_sapiens
ENSIPUG00000024787	trmt13	98	52.953	ENSAPOG00000015131	trmt13	99	52.342	Acanthochromis_polyacanthus
ENSIPUG00000024787	trmt13	98	57.451	ENSAMEG00000008917	TRMT13	95	57.359	Ailuropoda_melanoleuca
ENSIPUG00000024787	trmt13	99	56.503	ENSACIG00000005804	trmt13	95	55.411	Amphilophus_citrinellus
ENSIPUG00000024787	trmt13	98	53.360	ENSAOCG00000023585	trmt13	99	52.546	Amphiprion_ocellaris
ENSIPUG00000024787	trmt13	98	53.157	ENSAPEG00000004025	trmt13	99	52.953	Amphiprion_percula
ENSIPUG00000024787	trmt13	98	56.710	ENSATEG00000006597	trmt13	97	56.494	Anabas_testudineus
ENSIPUG00000024787	trmt13	90	57.109	ENSAPLG00000014924	TRMT13	99	56.532	Anas_platyrhynchos
ENSIPUG00000024787	trmt13	99	55.460	ENSACAG00000003498	TRMT13	99	55.342	Anolis_carolinensis
ENSIPUG00000024787	trmt13	99	56.780	ENSANAG00000019525	TRMT13	92	62.000	Aotus_nancymaae
ENSIPUG00000024787	trmt13	98	58.022	ENSACLG00000020018	trmt13	99	56.484	Astatotilapia_calliptera
ENSIPUG00000024787	trmt13	99	74.840	ENSAMXG00000017963	trmt13	99	74.946	Astyanax_mexicanus
ENSIPUG00000024787	trmt13	99	55.319	ENSBTAG00000015781	TRMT13	98	54.584	Bos_taurus
ENSIPUG00000024787	trmt13	87	33.463	WBGene00013026	Y49A3A.3	64	33.463	Caenorhabditis_elegans
ENSIPUG00000024787	trmt13	99	56.476	ENSCJAG00000000200	TRMT13	90	68.421	Callithrix_jacchus
ENSIPUG00000024787	trmt13	65	54.516	ENSCAFG00000020021	TRMT13	97	53.268	Canis_familiaris
ENSIPUG00000024787	trmt13	92	59.259	ENSCAFG00020011572	TRMT13	94	60.741	Canis_lupus_dingo
ENSIPUG00000024787	trmt13	99	54.968	ENSCHIG00000015395	TRMT13	98	54.797	Capra_hircus
ENSIPUG00000024787	trmt13	98	55.819	ENSTSYG00000010811	TRMT13	93	61.702	Carlito_syrichta
ENSIPUG00000024787	trmt13	73	45.366	ENSCAPG00000009085	TRMT13	88	47.853	Cavia_aperea
ENSIPUG00000024787	trmt13	98	58.065	ENSCPOG00000000694	TRMT13	96	57.050	Cavia_porcellus
ENSIPUG00000024787	trmt13	99	56.568	ENSCCAG00000023772	TRMT13	98	55.626	Cebus_capucinus
ENSIPUG00000024787	trmt13	98	57.792	ENSCATG00000033556	TRMT13	95	56.833	Cercocebus_atys
ENSIPUG00000024787	trmt13	89	56.522	ENSCLAG00000008220	TRMT13	98	56.250	Chinchilla_lanigera
ENSIPUG00000024787	trmt13	98	58.225	ENSCSAG00000001506	TRMT13	95	57.267	Chlorocebus_sabaeus
ENSIPUG00000024787	trmt13	100	55.864	ENSCPBG00000026671	TRMT13	98	55.864	Chrysemys_picta_bellii
ENSIPUG00000024787	trmt13	98	58.225	ENSCANG00000034659	TRMT13	95	57.267	Colobus_angolensis_palliatus
ENSIPUG00000024787	trmt13	93	60.440	ENSCGRG00001021601	Trmt13	96	55.531	Cricetulus_griseus_chok1gshd
ENSIPUG00000024787	trmt13	52	48.996	ENSCGRG00000000093	-	96	49.398	Cricetulus_griseus_crigri
ENSIPUG00000024787	trmt13	98	56.152	ENSCSEG00000000591	trmt13	98	55.481	Cynoglossus_semilaevis
ENSIPUG00000024787	trmt13	98	52.766	ENSCVAG00000017342	trmt13	94	52.878	Cyprinodon_variegatus
ENSIPUG00000024787	trmt13	99	69.546	ENSDARG00000102846	trmt13	98	68.898	Danio_rerio
ENSIPUG00000024787	trmt13	89	60.606	ENSDNOG00000001710	TRMT13	81	62.642	Dasypus_novemcinctus
ENSIPUG00000024787	trmt13	99	55.368	ENSDORG00000015808	Trmt13	98	54.352	Dipodomys_ordii
ENSIPUG00000024787	trmt13	98	35.129	FBgn0037435	CG18048	94	35.345	Drosophila_melanogaster
ENSIPUG00000024787	trmt13	98	49.244	ENSETEG00000005819	TRMT13	96	49.676	Echinops_telfairi
ENSIPUG00000024787	trmt13	96	45.534	ENSEBUG00000014444	trmt13	96	45.098	Eptatretus_burgeri
ENSIPUG00000024787	trmt13	97	56.897	ENSEASG00005015918	TRMT13	95	56.304	Equus_asinus_asinus
ENSIPUG00000024787	trmt13	97	56.897	ENSECAG00000022626	TRMT13	95	56.304	Equus_caballus
ENSIPUG00000024787	trmt13	80	58.120	ENSEEUG00000000294	TRMT13	74	57.407	Erinaceus_europaeus
ENSIPUG00000024787	trmt13	99	63.441	ENSELUG00000003803	trmt13	99	63.871	Esox_lucius
ENSIPUG00000024787	trmt13	100	54.873	ENSFCAG00000030618	TRMT13	98	54.449	Felis_catus
ENSIPUG00000024787	trmt13	97	57.333	ENSFALG00000002424	TRMT13	95	57.111	Ficedula_albicollis
ENSIPUG00000024787	trmt13	99	56.476	ENSFDAG00000006342	TRMT13	98	56.051	Fukomys_damarensis
ENSIPUG00000024787	trmt13	89	58.397	ENSFHEG00000022954	trmt13	96	57.584	Fundulus_heteroclitus
ENSIPUG00000024787	trmt13	97	54.299	ENSGMOG00000013223	trmt13	100	54.299	Gadus_morhua
ENSIPUG00000024787	trmt13	96	57.589	ENSGALG00000005290	TRMT13	98	57.974	Gallus_gallus
ENSIPUG00000024787	trmt13	89	56.134	ENSGAFG00000001577	trmt13	81	57.534	Gambusia_affinis
ENSIPUG00000024787	trmt13	99	56.739	ENSGACG00000013428	trmt13	99	56.522	Gasterosteus_aculeatus
ENSIPUG00000024787	trmt13	99	56.034	ENSGAGG00000023303	TRMT13	97	63.806	Gopherus_agassizii
ENSIPUG00000024787	trmt13	98	57.792	ENSGGOG00000005616	TRMT13	95	56.833	Gorilla_gorilla
ENSIPUG00000024787	trmt13	98	57.860	ENSHBUG00000007754	trmt13	99	56.332	Haplochromis_burtoni
ENSIPUG00000024787	trmt13	97	56.645	ENSHGLG00000002164	TRMT13	95	56.304	Heterocephalus_glaber_female
ENSIPUG00000024787	trmt13	97	56.645	ENSHGLG00100001618	TRMT13	95	56.304	Heterocephalus_glaber_male
ENSIPUG00000024787	trmt13	97	50.000	ENSHCOG00000020553	trmt13	96	49.103	Hippocampus_comes
ENSIPUG00000024787	trmt13	97	56.277	ENSSTOG00000013483	TRMT13	95	55.677	Ictidomys_tridecemlineatus
ENSIPUG00000024787	trmt13	100	56.303	ENSJJAG00000018012	Trmt13	98	55.508	Jaculus_jaculus
ENSIPUG00000024787	trmt13	64	56.655	ENSKMAG00000007639	trmt13	92	55.631	Kryptolebias_marmoratus
ENSIPUG00000024787	trmt13	98	53.961	ENSLBEG00000020238	trmt13	99	53.731	Labrus_bergylta
ENSIPUG00000024787	trmt13	99	58.925	ENSLACG00000013153	TRMT13	99	59.140	Latimeria_chalumnae
ENSIPUG00000024787	trmt13	99	61.790	ENSLOCG00000000418	trmt13	99	61.957	Lepisosteus_oculatus
ENSIPUG00000024787	trmt13	77	54.121	ENSLAFG00000002383	TRMT13	98	54.121	Loxodonta_africana
ENSIPUG00000024787	trmt13	98	58.009	ENSMFAG00000034681	TRMT13	95	56.833	Macaca_fascicularis
ENSIPUG00000024787	trmt13	98	58.009	ENSMMUG00000004243	TRMT13	95	56.833	Macaca_mulatta
ENSIPUG00000024787	trmt13	98	58.009	ENSMNEG00000036102	TRMT13	95	56.833	Macaca_nemestrina
ENSIPUG00000024787	trmt13	98	58.009	ENSMLEG00000034258	TRMT13	95	57.050	Mandrillus_leucophaeus
ENSIPUG00000024787	trmt13	100	56.317	ENSMAMG00000016597	trmt13	97	55.460	Mastacembelus_armatus
ENSIPUG00000024787	trmt13	98	57.802	ENSMZEG00005020959	trmt13	99	56.264	Maylandia_zebra
ENSIPUG00000024787	trmt13	90	57.933	ENSMGAG00000006970	TRMT13	99	58.513	Meleagris_gallopavo
ENSIPUG00000024787	trmt13	99	54.915	ENSMAUG00000010448	Trmt13	97	55.128	Mesocricetus_auratus
ENSIPUG00000024787	trmt13	98	56.645	ENSMICG00000005283	TRMT13	94	61.765	Microcebus_murinus
ENSIPUG00000024787	trmt13	99	56.170	ENSMOCG00000019914	Trmt13	97	55.769	Microtus_ochrogaster
ENSIPUG00000024787	trmt13	89	52.549	ENSMMOG00000007762	trmt13	90	52.549	Mola_mola
ENSIPUG00000024787	trmt13	98	55.172	ENSMODG00000003646	TRMT13	96	55.172	Monodelphis_domestica
ENSIPUG00000024787	trmt13	98	55.257	ENSMALG00000020965	trmt13	97	54.362	Monopterus_albus
ENSIPUG00000024787	trmt13	99	57.021	MGP_CAROLIEiJ_G0025568	Trmt13	94	64.286	Mus_caroli
ENSIPUG00000024787	trmt13	99	57.021	ENSMUSG00000033439	Trmt13	94	64.286	Mus_musculus
ENSIPUG00000024787	trmt13	99	57.986	MGP_PahariEiJ_G0027014	Trmt13	98	57.986	Mus_pahari
ENSIPUG00000024787	trmt13	99	57.234	MGP_SPRETEiJ_G0026518	Trmt13	94	64.286	Mus_spretus
ENSIPUG00000024787	trmt13	77	54.821	ENSMPUG00000002078	-	95	54.270	Mustela_putorius_furo
ENSIPUG00000024787	trmt13	98	57.235	ENSMLUG00000002124	TRMT13	95	56.223	Myotis_lucifugus
ENSIPUG00000024787	trmt13	99	52.597	ENSNBRG00000006783	trmt13	97	51.965	Neolamprologus_brichardi
ENSIPUG00000024787	trmt13	98	58.009	ENSNLEG00000035917	TRMT13	95	57.050	Nomascus_leucogenys
ENSIPUG00000024787	trmt13	80	51.681	ENSMEUG00000013346	-	95	54.237	Notamacropus_eugenii
ENSIPUG00000024787	trmt13	93	59.124	ENSOPRG00000012048	TRMT13	62	70.000	Ochotona_princeps
ENSIPUG00000024787	trmt13	52	55.414	ENSODEG00000006075	-	88	59.740	Octodon_degus
ENSIPUG00000024787	trmt13	98	57.424	ENSONIG00000004574	trmt13	99	56.769	Oreochromis_niloticus
ENSIPUG00000024787	trmt13	89	56.802	ENSOANG00000012057	TRMT13	97	57.041	Ornithorhynchus_anatinus
ENSIPUG00000024787	trmt13	98	56.710	ENSOCUG00000023095	TRMT13	96	55.459	Oryctolagus_cuniculus
ENSIPUG00000024787	trmt13	98	53.463	ENSORLG00000003320	trmt13	98	52.814	Oryzias_latipes
ENSIPUG00000024787	trmt13	98	53.846	ENSORLG00020005972	trmt13	97	52.402	Oryzias_latipes_hni
ENSIPUG00000024787	trmt13	98	56.114	ENSORLG00015002270	trmt13	98	55.459	Oryzias_latipes_hsok
ENSIPUG00000024787	trmt13	98	56.484	ENSOMEG00000006724	trmt13	94	55.824	Oryzias_melastigma
ENSIPUG00000024787	trmt13	98	56.838	ENSOGAG00000005618	TRMT13	93	56.250	Otolemur_garnettii
ENSIPUG00000024787	trmt13	99	54.968	ENSOARG00000017983	TRMT13	98	54.797	Ovis_aries
ENSIPUG00000024787	trmt13	98	58.009	ENSPPAG00000043736	TRMT13	95	57.050	Pan_paniscus
ENSIPUG00000024787	trmt13	100	55.252	ENSPPRG00000003424	TRMT13	98	54.873	Panthera_pardus
ENSIPUG00000024787	trmt13	100	55.252	ENSPTIG00000018598	TRMT13	98	54.873	Panthera_tigris_altaica
ENSIPUG00000024787	trmt13	98	58.009	ENSPTRG00000001001	TRMT13	95	57.050	Pan_troglodytes
ENSIPUG00000024787	trmt13	98	58.225	ENSPANG00000007598	TRMT13	95	57.267	Papio_anubis
ENSIPUG00000024787	trmt13	99	64.758	ENSPKIG00000001514	trmt13	99	64.978	Paramormyrops_kingsleyae
ENSIPUG00000024787	trmt13	82	60.166	ENSPSIG00000012703	TRMT13	99	54.306	Pelodiscus_sinensis
ENSIPUG00000024787	trmt13	98	55.088	ENSPMGG00000013298	trmt13	93	54.605	Periophthalmus_magnuspinnatus
ENSIPUG00000024787	trmt13	99	55.745	ENSPEMG00000000275	Trmt13	97	55.745	Peromyscus_maniculatus_bairdii
ENSIPUG00000024787	trmt13	98	46.170	ENSPMAG00000000823	trmt13	98	45.860	Petromyzon_marinus
ENSIPUG00000024787	trmt13	99	54.777	ENSPCIG00000007699	TRMT13	98	54.565	Phascolarctos_cinereus
ENSIPUG00000024787	trmt13	97	56.404	ENSPFOG00000008675	trmt13	95	55.281	Poecilia_formosa
ENSIPUG00000024787	trmt13	98	55.991	ENSPLAG00000009709	trmt13	99	54.902	Poecilia_latipinna
ENSIPUG00000024787	trmt13	98	55.773	ENSPMEG00000022954	trmt13	99	55.338	Poecilia_mexicana
ENSIPUG00000024787	trmt13	89	56.604	ENSPREG00000005645	trmt13	95	53.819	Poecilia_reticulata
ENSIPUG00000024787	trmt13	99	57.415	ENSPPYG00000001120	TRMT13	97	56.476	Pongo_abelii
ENSIPUG00000024787	trmt13	98	57.484	ENSPCAG00000002340	TRMT13	95	56.209	Procavia_capensis
ENSIPUG00000024787	trmt13	98	56.645	ENSPCOG00000017984	TRMT13	95	56.833	Propithecus_coquereli
ENSIPUG00000024787	trmt13	98	56.277	ENSPVAG00000017430	TRMT13	95	55.748	Pteropus_vampyrus
ENSIPUG00000024787	trmt13	98	55.895	ENSPNYG00000013690	trmt13	99	54.367	Pundamilia_nyererei
ENSIPUG00000024787	trmt13	99	75.862	ENSPNAG00000022130	trmt13	99	75.647	Pygocentrus_nattereri
ENSIPUG00000024787	trmt13	99	56.809	ENSRNOG00000015140	Trmt13	94	56.745	Rattus_norvegicus
ENSIPUG00000024787	trmt13	98	58.225	ENSRBIG00000037686	TRMT13	95	57.267	Rhinopithecus_bieti
ENSIPUG00000024787	trmt13	98	58.225	ENSRROG00000044057	TRMT13	95	57.267	Rhinopithecus_roxellana
ENSIPUG00000024787	trmt13	99	55.650	ENSSBOG00000026541	TRMT13	92	62.000	Saimiri_boliviensis_boliviensis
ENSIPUG00000024787	trmt13	91	57.845	ENSSHAG00000005213	TRMT13	94	57.176	Sarcophilus_harrisii
ENSIPUG00000024787	trmt13	100	64.286	ENSSFOG00015017560	trmt13	99	64.440	Scleropages_formosus
ENSIPUG00000024787	trmt13	99	54.584	ENSSMAG00000014592	trmt13	97	53.731	Scophthalmus_maximus
ENSIPUG00000024787	trmt13	99	55.346	ENSSDUG00000015508	trmt13	97	55.021	Seriola_dumerili
ENSIPUG00000024787	trmt13	99	55.649	ENSSLDG00000019060	trmt13	98	55.021	Seriola_lalandi_dorsalis
ENSIPUG00000024787	trmt13	100	50.955	ENSSARG00000010344	TRMT13	98	50.426	Sorex_araneus
ENSIPUG00000024787	trmt13	96	55.679	ENSSPUG00000016339	TRMT13	98	55.876	Sphenodon_punctatus
ENSIPUG00000024787	trmt13	98	57.205	ENSSPAG00000011922	trmt13	98	57.081	Stegastes_partitus
ENSIPUG00000024787	trmt13	98	56.103	ENSSSCG00000006869	TRMT13	96	56.156	Sus_scrofa
ENSIPUG00000024787	trmt13	98	57.743	ENSTGUG00000005253	TRMT13	98	57.080	Taeniopygia_guttata
ENSIPUG00000024787	trmt13	98	53.846	ENSTRUG00000008400	trmt13	98	52.735	Takifugu_rubripes
ENSIPUG00000024787	trmt13	87	44.059	ENSTBEG00000008911	TRMT13	98	44.335	Tupaia_belangeri
ENSIPUG00000024787	trmt13	98	55.195	ENSUAMG00000017251	TRMT13	95	54.762	Ursus_americanus
ENSIPUG00000024787	trmt13	98	57.576	ENSUMAG00000007901	TRMT13	97	56.941	Ursus_maritimus
ENSIPUG00000024787	trmt13	90	45.433	ENSVPAG00000001034	TRMT13	98	44.787	Vicugna_pacos
ENSIPUG00000024787	trmt13	98	55.773	ENSVVUG00000021996	TRMT13	95	55.991	Vulpes_vulpes
ENSIPUG00000024787	trmt13	99	53.595	ENSXETG00000013204	trmt13	99	53.057	Xenopus_tropicalis
ENSIPUG00000024787	trmt13	98	55.120	ENSXMAG00000010765	trmt13	99	54.466	Xiphophorus_maculatus