EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000024801 (Gene tree)
Gene ID: 100304711
Gene Symbol: pum3
Alias: cb379|im:7148292|puf-A|sb:cb379|si:ch211-241o7.5
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 12985 bases
Position: chr16:5630580-5643564
Accession: 100304711
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000037033	CPL	PF08144.11	7.8e-48	1	1
ENSIPUP00000037035	CPL	PF08144.11	7.4e-47	1	1
ENSIPUP00000037037	CPL	PF08144.11	7.4e-47	1	1
ENSIPUP00000037042	CPL	PF08144.11	7.8e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000038485	-	2199	-	ENSIPUP00000037042	639 (aa)	-	-
ENSIPUT00000038477	-	2525	XM_017489558	ENSIPUP00000037033	631 (aa)	XP_017345047	-
ENSIPUT00000038481	-	2531	-	ENSIPUP00000037037	633 (aa)	-	-
ENSIPUT00000038479	-	2531	-	ENSIPUP00000037035	633 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000024801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000024801's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000024801	pum3	93	65.167	ENSG00000080608	PUM3	98	58.333	Homo_sapiens
ENSIPUG00000024801	pum3	99	63.174	ENSAPOG00000020252	pum3	95	64.228	Acanthochromis_polyacanthus
ENSIPUG00000024801	pum3	98	63.565	ENSAMEG00000012187	PUM3	87	68.142	Ailuropoda_melanoleuca
ENSIPUG00000024801	pum3	95	60.100	ENSACIG00000009786	pum3	89	64.179	Amphilophus_citrinellus
ENSIPUG00000024801	pum3	99	63.020	ENSAOCG00000004439	pum3	95	64.065	Amphiprion_ocellaris
ENSIPUG00000024801	pum3	99	63.020	ENSAPEG00000020523	pum3	95	64.065	Amphiprion_percula
ENSIPUG00000024801	pum3	99	64.476	ENSATEG00000005799	pum3	95	64.490	Anabas_testudineus
ENSIPUG00000024801	pum3	97	63.622	ENSAPLG00000002920	PUM3	92	66.783	Anas_platyrhynchos
ENSIPUG00000024801	pum3	90	63.796	ENSACAG00000003174	PUM3	88	65.970	Anolis_carolinensis
ENSIPUG00000024801	pum3	98	63.191	ENSANAG00000024520	PUM3	87	67.965	Aotus_nancymaae
ENSIPUG00000024801	pum3	99	60.890	ENSACLG00000001017	pum3	95	61.165	Astatotilapia_calliptera
ENSIPUG00000024801	pum3	100	82.567	ENSAMXG00000020911	pum3	100	82.567	Astyanax_mexicanus
ENSIPUG00000024801	pum3	98	63.249	ENSBTAG00000013357	PUM3	87	67.434	Bos_taurus
ENSIPUG00000024801	pum3	83	31.471	WBGene00014165	puf-12	68	31.471	Caenorhabditis_elegans
ENSIPUG00000024801	pum3	93	66.167	ENSCJAG00000010917	PUM3	87	68.375	Callithrix_jacchus
ENSIPUG00000024801	pum3	99	63.565	ENSCAFG00000002035	PUM3	87	67.788	Canis_familiaris
ENSIPUG00000024801	pum3	99	63.565	ENSCAFG00020026867	PUM3	87	67.788	Canis_lupus_dingo
ENSIPUG00000024801	pum3	98	63.249	ENSCHIG00000021559	PUM3	87	67.434	Capra_hircus
ENSIPUG00000024801	pum3	93	65.167	ENSTSYG00000007481	PUM3	87	67.257	Carlito_syrichta
ENSIPUG00000024801	pum3	99	61.760	ENSCAPG00000010592	-	86	65.664	Cavia_aperea
ENSIPUG00000024801	pum3	94	64.204	ENSCPOG00000008552	-	87	66.431	Cavia_porcellus
ENSIPUG00000024801	pum3	93	65.167	ENSCCAG00000032650	PUM3	87	67.611	Cebus_capucinus
ENSIPUG00000024801	pum3	98	63.722	ENSCATG00000024880	PUM3	87	68.021	Cercocebus_atys
ENSIPUG00000024801	pum3	97	65.466	ENSCLAG00000011892	PUM3	87	68.496	Chinchilla_lanigera
ENSIPUG00000024801	pum3	98	63.407	ENSCSAG00000008691	PUM3	87	67.668	Chlorocebus_sabaeus
ENSIPUG00000024801	pum3	79	55.489	ENSCHOG00000002535	PUM3	74	55.489	Choloepus_hoffmanni
ENSIPUG00000024801	pum3	100	62.809	ENSCPBG00000025470	PUM3	84	67.376	Chrysemys_picta_bellii
ENSIPUG00000024801	pum3	84	39.636	ENSCING00000024199	-	96	40.221	Ciona_intestinalis
ENSIPUG00000024801	pum3	92	40.134	ENSCSAVG00000006072	-	98	41.491	Ciona_savignyi
ENSIPUG00000024801	pum3	93	66.000	ENSCANG00000006142	PUM3	87	68.021	Colobus_angolensis_palliatus
ENSIPUG00000024801	pum3	94	66.275	ENSCGRG00001016402	Pum3	87	67.426	Cricetulus_griseus_chok1gshd
ENSIPUG00000024801	pum3	94	66.275	ENSCGRG00000010207	Pum3	87	67.426	Cricetulus_griseus_crigri
ENSIPUG00000024801	pum3	89	61.538	ENSCSEG00000001565	pum3	93	63.653	Cynoglossus_semilaevis
ENSIPUG00000024801	pum3	78	58.246	ENSCVAG00000006550	pum3	99	58.596	Cyprinodon_variegatus
ENSIPUG00000024801	pum3	100	79.873	ENSDARG00000087779	pum3	100	79.081	Danio_rerio
ENSIPUG00000024801	pum3	93	56.073	ENSDNOG00000008157	PUM3	60	57.848	Dasypus_novemcinctus
ENSIPUG00000024801	pum3	83	65.655	ENSETEG00000015331	PUM3	84	65.751	Echinops_telfairi
ENSIPUG00000024801	pum3	83	41.463	ENSEBUG00000011586	pum3	78	41.463	Eptatretus_burgeri
ENSIPUG00000024801	pum3	99	64.050	ENSEASG00005010350	PUM3	87	68.673	Equus_asinus_asinus
ENSIPUG00000024801	pum3	99	63.893	ENSECAG00000017193	PUM3	87	68.496	Equus_caballus
ENSIPUG00000024801	pum3	86	57.989	ENSEEUG00000010314	PUM3	86	59.770	Erinaceus_europaeus
ENSIPUG00000024801	pum3	99	74.884	ENSELUG00000002215	pum3	94	77.558	Esox_lucius
ENSIPUG00000024801	pum3	100	63.134	ENSFALG00000010509	PUM3	87	67.553	Ficedula_albicollis
ENSIPUG00000024801	pum3	93	65.167	ENSFDAG00000021027	PUM3	87	66.961	Fukomys_damarensis
ENSIPUG00000024801	pum3	98	69.029	ENSFHEG00000015576	pum3	94	69.029	Fundulus_heteroclitus
ENSIPUG00000024801	pum3	85	65.421	ENSGMOG00000014217	pum3	99	65.421	Gadus_morhua
ENSIPUG00000024801	pum3	97	63.681	ENSGALG00000010178	PUM3	88	67.376	Gallus_gallus
ENSIPUG00000024801	pum3	57	69.890	ENSGAFG00000001930	pum3	62	69.890	Gambusia_affinis
ENSIPUG00000024801	pum3	84	69.606	ENSGACG00000017878	pum3	97	69.606	Gasterosteus_aculeatus
ENSIPUG00000024801	pum3	99	63.434	ENSGAGG00000018983	PUM3	90	67.021	Gopherus_agassizii
ENSIPUG00000024801	pum3	98	63.249	ENSGGOG00000006143	PUM3	87	67.788	Gorilla_gorilla
ENSIPUG00000024801	pum3	99	55.292	ENSHBUG00000012903	pum3	92	56.126	Haplochromis_burtoni
ENSIPUG00000024801	pum3	99	64.082	ENSHGLG00000015868	-	87	67.845	Heterocephalus_glaber_female
ENSIPUG00000024801	pum3	99	64.082	ENSHGLG00100018825	PUM3	87	67.845	Heterocephalus_glaber_male
ENSIPUG00000024801	pum3	99	60.954	ENSHCOG00000010306	pum3	99	60.837	Hippocampus_comes
ENSIPUG00000024801	pum3	93	65.833	ENSSTOG00000009586	PUM3	87	67.788	Ictidomys_tridecemlineatus
ENSIPUG00000024801	pum3	95	64.333	ENSJJAG00000012563	Pum3	87	66.081	Jaculus_jaculus
ENSIPUG00000024801	pum3	99	62.422	ENSKMAG00000010277	pum3	99	62.021	Kryptolebias_marmoratus
ENSIPUG00000024801	pum3	99	62.100	ENSLBEG00000012213	pum3	99	61.890	Labrus_bergylta
ENSIPUG00000024801	pum3	100	62.422	ENSLACG00000008312	PUM3	94	65.124	Latimeria_chalumnae
ENSIPUG00000024801	pum3	100	74.643	ENSLOCG00000012529	pum3	99	74.643	Lepisosteus_oculatus
ENSIPUG00000024801	pum3	98	63.175	ENSLAFG00000017341	PUM3	87	67.080	Loxodonta_africana
ENSIPUG00000024801	pum3	98	63.880	ENSMFAG00000001430	PUM3	87	68.198	Macaca_fascicularis
ENSIPUG00000024801	pum3	98	63.880	ENSMMUG00000002362	PUM3	86	68.198	Macaca_mulatta
ENSIPUG00000024801	pum3	98	63.880	ENSMNEG00000035288	PUM3	87	68.198	Macaca_nemestrina
ENSIPUG00000024801	pum3	93	66.333	ENSMLEG00000034820	PUM3	87	68.375	Mandrillus_leucophaeus
ENSIPUG00000024801	pum3	99	62.577	ENSMAMG00000022861	pum3	95	64.412	Mastacembelus_armatus
ENSIPUG00000024801	pum3	99	60.736	ENSMZEG00005014205	pum3	92	61.003	Maylandia_zebra
ENSIPUG00000024801	pum3	87	62.795	ENSMGAG00000002255	PUM3	88	62.624	Meleagris_gallopavo
ENSIPUG00000024801	pum3	99	64.603	ENSMAUG00000009733	Pum3	87	67.426	Mesocricetus_auratus
ENSIPUG00000024801	pum3	93	65.333	ENSMICG00000045916	PUM3	75	67.434	Microcebus_murinus
ENSIPUG00000024801	pum3	94	63.758	ENSMOCG00000014830	-	89	64.799	Microtus_ochrogaster
ENSIPUG00000024801	pum3	98	64.830	ENSMOCG00000019519	-	87	67.250	Microtus_ochrogaster
ENSIPUG00000024801	pum3	97	60.987	ENSMMOG00000012184	pum3	98	61.011	Mola_mola
ENSIPUG00000024801	pum3	89	63.214	ENSMODG00000015417	PUM3	77	63.214	Monodelphis_domestica
ENSIPUG00000024801	pum3	99	63.885	ENSMALG00000022164	pum3	87	67.642	Monopterus_albus
ENSIPUG00000024801	pum3	99	62.698	MGP_CAROLIEiJ_G0022845	Pum3	87	66.726	Mus_caroli
ENSIPUG00000024801	pum3	99	62.540	ENSMUSG00000041360	Pum3	87	66.549	Mus_musculus
ENSIPUG00000024801	pum3	99	63.333	MGP_PahariEiJ_G0014338	Pum3	87	66.726	Mus_pahari
ENSIPUG00000024801	pum3	99	62.381	MGP_SPRETEiJ_G0023763	Pum3	87	66.372	Mus_spretus
ENSIPUG00000024801	pum3	99	64.960	ENSMPUG00000005125	PUM3	87	68.496	Mustela_putorius_furo
ENSIPUG00000024801	pum3	98	63.249	ENSMLUG00000002309	PUM3	87	67.611	Myotis_lucifugus
ENSIPUG00000024801	pum3	82	66.346	ENSNGAG00000019468	Pum3	87	64.550	Nannospalax_galili
ENSIPUG00000024801	pum3	96	59.603	ENSNBRG00000021370	pum3	93	58.361	Neolamprologus_brichardi
ENSIPUG00000024801	pum3	98	63.722	ENSNLEG00000008712	PUM3	87	68.021	Nomascus_leucogenys
ENSIPUG00000024801	pum3	77	48.255	ENSMEUG00000013606	-	99	48.600	Notamacropus_eugenii
ENSIPUG00000024801	pum3	70	54.422	ENSOPRG00000004225	-	59	59.115	Ochotona_princeps
ENSIPUG00000024801	pum3	98	63.301	ENSODEG00000003625	-	86	68.028	Octodon_degus
ENSIPUG00000024801	pum3	93	60.697	ENSODEG00000016477	-	86	62.721	Octodon_degus
ENSIPUG00000024801	pum3	99	60.856	ENSONIG00000012733	pum3	95	61.290	Oreochromis_niloticus
ENSIPUG00000024801	pum3	83	66.224	ENSOANG00000014995	PUM3	99	66.300	Ornithorhynchus_anatinus
ENSIPUG00000024801	pum3	98	62.599	ENSOCUG00000004189	-	87	67.434	Oryctolagus_cuniculus
ENSIPUG00000024801	pum3	98	62.441	ENSOCUG00000026104	-	87	67.080	Oryctolagus_cuniculus
ENSIPUG00000024801	pum3	99	60.334	ENSORLG00000014935	pum3	95	63.415	Oryzias_latipes
ENSIPUG00000024801	pum3	99	61.360	ENSORLG00020002841	pum3	99	62.539	Oryzias_latipes_hni
ENSIPUG00000024801	pum3	99	62.074	ENSORLG00015015906	pum3	96	64.171	Oryzias_latipes_hsok
ENSIPUG00000024801	pum3	99	61.479	ENSOMEG00000009427	pum3	95	62.682	Oryzias_melastigma
ENSIPUG00000024801	pum3	95	47.460	ENSOGAG00000033481	-	88	50.088	Otolemur_garnettii
ENSIPUG00000024801	pum3	99	62.776	ENSOGAG00000008125	-	87	67.434	Otolemur_garnettii
ENSIPUG00000024801	pum3	98	62.934	ENSOARG00000013337	PUM3	87	67.080	Ovis_aries
ENSIPUG00000024801	pum3	93	65.500	ENSPPAG00000041337	PUM3	87	67.788	Pan_paniscus
ENSIPUG00000024801	pum3	98	63.565	ENSPPRG00000000809	PUM3	87	67.788	Panthera_pardus
ENSIPUG00000024801	pum3	98	63.565	ENSPTIG00000021934	PUM3	87	67.788	Panthera_tigris_altaica
ENSIPUG00000024801	pum3	93	65.667	ENSPTRG00000020735	PUM3	87	67.965	Pan_troglodytes
ENSIPUG00000024801	pum3	98	63.880	ENSPANG00000025118	PUM3	87	68.198	Papio_anubis
ENSIPUG00000024801	pum3	100	72.939	ENSPKIG00000022249	pum3	99	72.772	Paramormyrops_kingsleyae
ENSIPUG00000024801	pum3	100	62.000	ENSPSIG00000016272	PUM3	89	66.667	Pelodiscus_sinensis
ENSIPUG00000024801	pum3	78	68.228	ENSPMGG00000021261	pum3	98	68.228	Periophthalmus_magnuspinnatus
ENSIPUG00000024801	pum3	99	53.081	ENSPEMG00000019340	-	86	55.245	Peromyscus_maniculatus_bairdii
ENSIPUG00000024801	pum3	91	62.827	ENSPCIG00000030598	PUM3	75	63.506	Phascolarctos_cinereus
ENSIPUG00000024801	pum3	99	62.009	ENSPFOG00000001719	pum3	94	62.914	Poecilia_formosa
ENSIPUG00000024801	pum3	99	61.325	ENSPLAG00000020010	pum3	95	62.013	Poecilia_latipinna
ENSIPUG00000024801	pum3	99	61.920	ENSPMEG00000017451	pum3	95	62.643	Poecilia_mexicana
ENSIPUG00000024801	pum3	51	76.842	ENSPREG00000019478	-	76	45.540	Poecilia_reticulata
ENSIPUG00000024801	pum3	98	63.722	ENSPPYG00000019255	PUM3	87	68.319	Pongo_abelii
ENSIPUG00000024801	pum3	97	56.661	ENSPCAG00000005797	PUM3	83	59.823	Procavia_capensis
ENSIPUG00000024801	pum3	99	62.618	ENSPCOG00000027325	PUM3	87	67.257	Propithecus_coquereli
ENSIPUG00000024801	pum3	93	65.333	ENSPVAG00000016135	PUM3	82	67.434	Pteropus_vampyrus
ENSIPUG00000024801	pum3	99	60.923	ENSPNYG00000016124	pum3	95	61.165	Pundamilia_nyererei
ENSIPUG00000024801	pum3	100	82.250	ENSPNAG00000026524	pum3	100	82.250	Pygocentrus_nattereri
ENSIPUG00000024801	pum3	99	63.810	ENSRNOG00000048356	RGD1308750	87	67.257	Rattus_norvegicus
ENSIPUG00000024801	pum3	98	63.535	ENSRNOG00000012574	Pum3	87	67.611	Rattus_norvegicus
ENSIPUG00000024801	pum3	93	65.667	ENSRBIG00000036924	PUM3	87	67.788	Rhinopithecus_bieti
ENSIPUG00000024801	pum3	93	65.833	ENSRROG00000041089	PUM3	87	67.965	Rhinopithecus_roxellana
ENSIPUG00000024801	pum3	93	65.500	ENSSBOG00000028066	PUM3	87	67.788	Saimiri_boliviensis_boliviensis
ENSIPUG00000024801	pum3	97	58.333	ENSSHAG00000003730	PUM3	87	63.380	Sarcophilus_harrisii
ENSIPUG00000024801	pum3	100	72.628	ENSSFOG00015018778	pum3	94	74.917	Scleropages_formosus
ENSIPUG00000024801	pum3	99	62.730	ENSSMAG00000013236	pum3	95	65.049	Scophthalmus_maximus
ENSIPUG00000024801	pum3	99	63.213	ENSSDUG00000001887	pum3	93	65.217	Seriola_dumerili
ENSIPUG00000024801	pum3	99	64.134	ENSSLDG00000015766	pum3	94	65.378	Seriola_lalandi_dorsalis
ENSIPUG00000024801	pum3	93	59.799	ENSSARG00000000579	PUM3	91	62.014	Sorex_araneus
ENSIPUG00000024801	pum3	99	61.321	ENSSPUG00000001707	PUM3	88	65.780	Sphenodon_punctatus
ENSIPUG00000024801	pum3	99	63.721	ENSSPAG00000003976	pum3	95	64.437	Stegastes_partitus
ENSIPUG00000024801	pum3	98	64.353	ENSSSCG00000005227	PUM3	87	68.850	Sus_scrofa
ENSIPUG00000024801	pum3	97	63.307	ENSTGUG00000005339	PUM3	88	67.021	Taeniopygia_guttata
ENSIPUG00000024801	pum3	99	62.861	ENSTRUG00000004074	pum3	99	62.500	Takifugu_rubripes
ENSIPUG00000024801	pum3	100	65.032	ENSTNIG00000010325	pum3	99	64.976	Tetraodon_nigroviridis
ENSIPUG00000024801	pum3	83	50.379	ENSTBEG00000013058	PUM3	85	50.719	Tupaia_belangeri
ENSIPUG00000024801	pum3	98	57.571	ENSTTRG00000001062	PUM3	83	61.170	Tursiops_truncatus
ENSIPUG00000024801	pum3	98	57.795	ENSUMAG00000018443	PUM3	99	64.474	Ursus_maritimus
ENSIPUG00000024801	pum3	98	63.091	ENSVPAG00000010766	PUM3	86	67.434	Vicugna_pacos
ENSIPUG00000024801	pum3	99	63.565	ENSVVUG00000006527	PUM3	87	67.788	Vulpes_vulpes
ENSIPUG00000024801	pum3	97	53.647	ENSXETG00000011707	pum3	87	55.830	Xenopus_tropicalis
ENSIPUG00000024801	pum3	95	61.258	ENSXCOG00000006725	pum3	99	59.574	Xiphophorus_couchianus
ENSIPUG00000024801	pum3	99	62.441	ENSXMAG00000002926	pum3	95	61.626	Xiphophorus_maculatus