EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000024803 (Gene tree)
Gene ID: 108271320
Gene Symbol: rtca
Alias: cb158|rtcd1|sb:cb158|wu:fc62c03
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 10723 bases
Position: chr10:13244336-13255058
Accession: 108271320
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000037036	RTC	PF01137.21	1.4e-87	1	1
ENSIPUP00000037036	RTC_insert	PF05189.13	2.6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000038480	-	3438	XM_017478829	ENSIPUP00000037036	364 (aa)	XP_017334318	A0A2D0RUZ1

Gene Model

Click here to download ENSIPUG00000024803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000024803's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000024803	rtca	100	73.497	ENSG00000137996	RTCA	100	73.497	Homo_sapiens
ENSIPUG00000024803	rtca	100	79.121	ENSAPOG00000001345	rtca	99	79.121	Acanthochromis_polyacanthus
ENSIPUG00000024803	rtca	73	73.978	ENSAMEG00000008855	RTCA	100	73.978	Ailuropoda_melanoleuca
ENSIPUG00000024803	rtca	100	79.121	ENSACIG00000019643	rtca	100	79.121	Amphilophus_citrinellus
ENSIPUG00000024803	rtca	100	79.121	ENSAOCG00000014979	rtca	99	79.121	Amphiprion_ocellaris
ENSIPUG00000024803	rtca	100	79.121	ENSAPEG00000006945	rtca	99	79.121	Amphiprion_percula
ENSIPUG00000024803	rtca	96	79.083	ENSATEG00000006315	rtca	96	79.083	Anabas_testudineus
ENSIPUG00000024803	rtca	96	69.688	ENSAPLG00000015430	RTCA	100	69.688	Anas_platyrhynchos
ENSIPUG00000024803	rtca	100	72.951	ENSANAG00000025446	RTCA	100	72.951	Aotus_nancymaae
ENSIPUG00000024803	rtca	100	79.670	ENSACLG00000020770	rtca	99	79.670	Astatotilapia_calliptera
ENSIPUG00000024803	rtca	100	95.055	ENSAMXG00000043271	rtca	100	95.055	Astyanax_mexicanus
ENSIPUG00000024803	rtca	100	74.044	ENSBTAG00000006321	RTCA	100	74.044	Bos_taurus
ENSIPUG00000024803	rtca	100	72.951	ENSCJAG00000003398	RTCA	100	72.951	Callithrix_jacchus
ENSIPUG00000024803	rtca	100	73.224	ENSCAFG00000020010	RTCA	68	73.224	Canis_familiaris
ENSIPUG00000024803	rtca	100	73.224	ENSCAFG00020011528	RTCA	57	73.224	Canis_lupus_dingo
ENSIPUG00000024803	rtca	100	73.770	ENSCHIG00000018937	RTCA	100	73.770	Capra_hircus
ENSIPUG00000024803	rtca	100	72.131	ENSTSYG00000011305	RTCA	100	72.131	Carlito_syrichta
ENSIPUG00000024803	rtca	100	73.497	ENSCCAG00000021844	RTCA	99	75.075	Cebus_capucinus
ENSIPUG00000024803	rtca	100	70.449	ENSCATG00000019364	RTCA	100	72.492	Cercocebus_atys
ENSIPUG00000024803	rtca	87	74.051	ENSCLAG00000006125	RTCA	100	74.051	Chinchilla_lanigera
ENSIPUG00000024803	rtca	100	73.224	ENSCSAG00000001509	RTCA	100	73.224	Chlorocebus_sabaeus
ENSIPUG00000024803	rtca	100	71.585	ENSCHOG00000005211	RTCA	100	71.585	Choloepus_hoffmanni
ENSIPUG00000024803	rtca	100	69.315	ENSCPBG00000026658	RTCA	100	69.315	Chrysemys_picta_bellii
ENSIPUG00000024803	rtca	99	55.495	ENSCING00000007875	-	99	55.495	Ciona_intestinalis
ENSIPUG00000024803	rtca	99	54.396	ENSCSAVG00000007269	-	99	54.396	Ciona_savignyi
ENSIPUG00000024803	rtca	100	72.951	ENSCANG00000040106	RTCA	100	72.951	Colobus_angolensis_palliatus
ENSIPUG00000024803	rtca	73	72.119	ENSCGRG00001013163	Rtca	85	72.119	Cricetulus_griseus_chok1gshd
ENSIPUG00000024803	rtca	99	75.207	ENSCSEG00000000530	rtca	98	75.207	Cynoglossus_semilaevis
ENSIPUG00000024803	rtca	100	65.574	ENSCVAG00000021809	rtca	100	65.574	Cyprinodon_variegatus
ENSIPUG00000024803	rtca	100	90.934	ENSDARG00000002215	rtca	100	90.934	Danio_rerio
ENSIPUG00000024803	rtca	100	71.858	ENSDNOG00000000456	RTCA	100	71.858	Dasypus_novemcinctus
ENSIPUG00000024803	rtca	100	72.131	ENSDORG00000005448	Rtca	100	72.131	Dipodomys_ordii
ENSIPUG00000024803	rtca	99	40.443	FBgn0025630	Rtca	99	40.443	Drosophila_melanogaster
ENSIPUG00000024803	rtca	95	53.161	ENSEBUG00000008556	rtca	96	53.161	Eptatretus_burgeri
ENSIPUG00000024803	rtca	100	73.224	ENSEASG00005015926	RTCA	100	73.224	Equus_asinus_asinus
ENSIPUG00000024803	rtca	100	73.224	ENSECAG00000019831	RTCA	100	73.224	Equus_caballus
ENSIPUG00000024803	rtca	91	66.763	ENSEEUG00000001165	RTCA	100	66.763	Erinaceus_europaeus
ENSIPUG00000024803	rtca	100	81.044	ENSELUG00000003741	rtca	100	81.044	Esox_lucius
ENSIPUG00000024803	rtca	100	73.497	ENSFCAG00000024460	RTCA	100	73.497	Felis_catus
ENSIPUG00000024803	rtca	91	71.772	ENSFALG00000002443	RTCA	90	71.772	Ficedula_albicollis
ENSIPUG00000024803	rtca	100	71.858	ENSFDAG00000012070	-	100	71.858	Fukomys_damarensis
ENSIPUG00000024803	rtca	98	57.182	ENSFDAG00000016084	-	100	57.182	Fukomys_damarensis
ENSIPUG00000024803	rtca	54	86.735	ENSFHEG00000002868	rtca	93	79.817	Fundulus_heteroclitus
ENSIPUG00000024803	rtca	100	79.396	ENSGMOG00000013264	rtca	100	79.396	Gadus_morhua
ENSIPUG00000024803	rtca	100	69.041	ENSGALG00000005277	RTCA	100	69.041	Gallus_gallus
ENSIPUG00000024803	rtca	100	77.747	ENSGAFG00000011853	rtca	99	77.747	Gambusia_affinis
ENSIPUG00000024803	rtca	100	76.923	ENSGACG00000013497	rtca	100	76.923	Gasterosteus_aculeatus
ENSIPUG00000024803	rtca	80	69.625	ENSGAGG00000023306	RTCA	100	69.625	Gopherus_agassizii
ENSIPUG00000024803	rtca	100	72.404	ENSGGOG00000044018	-	100	72.404	Gorilla_gorilla
ENSIPUG00000024803	rtca	100	72.951	ENSGGOG00000009546	-	100	72.951	Gorilla_gorilla
ENSIPUG00000024803	rtca	100	79.670	ENSHBUG00000002114	rtca	99	79.670	Haplochromis_burtoni
ENSIPUG00000024803	rtca	100	72.678	ENSHGLG00000002617	RTCA	100	72.678	Heterocephalus_glaber_female
ENSIPUG00000024803	rtca	100	72.678	ENSHGLG00100006056	RTCA	100	72.678	Heterocephalus_glaber_male
ENSIPUG00000024803	rtca	100	68.407	ENSHCOG00000020628	rtca	89	68.407	Hippocampus_comes
ENSIPUG00000024803	rtca	100	64.208	ENSSTOG00000033099	-	100	64.208	Ictidomys_tridecemlineatus
ENSIPUG00000024803	rtca	100	67.486	ENSSTOG00000013528	-	100	67.486	Ictidomys_tridecemlineatus
ENSIPUG00000024803	rtca	100	53.151	ENSJJAG00000016178	Rtca	100	53.151	Jaculus_jaculus
ENSIPUG00000024803	rtca	100	78.571	ENSKMAG00000006651	rtca	99	78.571	Kryptolebias_marmoratus
ENSIPUG00000024803	rtca	99	77.562	ENSLBEG00000028971	rtca	99	77.562	Labrus_bergylta
ENSIPUG00000024803	rtca	88	76.803	ENSLBEG00000002448	-	99	76.803	Labrus_bergylta
ENSIPUG00000024803	rtca	100	67.671	ENSLACG00000013666	RTCA	100	67.671	Latimeria_chalumnae
ENSIPUG00000024803	rtca	100	79.178	ENSLOCG00000000093	rtca	99	79.178	Lepisosteus_oculatus
ENSIPUG00000024803	rtca	100	71.311	ENSLAFG00000001473	RTCA	100	71.311	Loxodonta_africana
ENSIPUG00000024803	rtca	100	73.224	ENSMFAG00000034132	RTCA	100	73.224	Macaca_fascicularis
ENSIPUG00000024803	rtca	100	73.224	ENSMMUG00000019105	RTCA	100	73.224	Macaca_mulatta
ENSIPUG00000024803	rtca	84	72.816	ENSMNEG00000037163	RTCA	100	72.816	Macaca_nemestrina
ENSIPUG00000024803	rtca	100	60.383	ENSMLEG00000042151	RTCA	100	60.383	Mandrillus_leucophaeus
ENSIPUG00000024803	rtca	100	80.769	ENSMAMG00000016536	rtca	100	80.769	Mastacembelus_armatus
ENSIPUG00000024803	rtca	100	79.670	ENSMZEG00005017945	rtca	99	79.670	Maylandia_zebra
ENSIPUG00000024803	rtca	87	70.755	ENSMGAG00000006892	RTCA	99	70.755	Meleagris_gallopavo
ENSIPUG00000024803	rtca	100	71.585	ENSMAUG00000008488	Rtca	100	71.585	Mesocricetus_auratus
ENSIPUG00000024803	rtca	84	73.786	ENSMICG00000008643	RTCA	100	73.786	Microcebus_murinus
ENSIPUG00000024803	rtca	100	71.585	ENSMOCG00000016660	Rtca	100	71.585	Microtus_ochrogaster
ENSIPUG00000024803	rtca	84	78.827	ENSMMOG00000007750	rtca	100	78.827	Mola_mola
ENSIPUG00000024803	rtca	100	71.858	ENSMODG00000003557	RTCA	100	71.858	Monodelphis_domestica
ENSIPUG00000024803	rtca	100	80.220	ENSMALG00000020844	rtca	100	80.220	Monopterus_albus
ENSIPUG00000024803	rtca	100	70.765	MGP_CAROLIEiJ_G0025565	Rtca	100	74.648	Mus_caroli
ENSIPUG00000024803	rtca	100	70.219	ENSMUSG00000000339	Rtca	100	74.648	Mus_musculus
ENSIPUG00000024803	rtca	100	70.765	MGP_PahariEiJ_G0027011	Rtca	100	74.648	Mus_pahari
ENSIPUG00000024803	rtca	100	70.492	MGP_SPRETEiJ_G0026515	Rtca	100	73.944	Mus_spretus
ENSIPUG00000024803	rtca	100	73.497	ENSMPUG00000012119	RTCA	100	73.497	Mustela_putorius_furo
ENSIPUG00000024803	rtca	100	70.300	ENSMLUG00000009922	RTCA	100	70.300	Myotis_lucifugus
ENSIPUG00000024803	rtca	100	71.038	ENSNGAG00000011540	Rtca	99	71.038	Nannospalax_galili
ENSIPUG00000024803	rtca	100	79.670	ENSNBRG00000003062	rtca	99	79.670	Neolamprologus_brichardi
ENSIPUG00000024803	rtca	100	72.951	ENSNLEG00000031426	RTCA	100	72.951	Nomascus_leucogenys
ENSIPUG00000024803	rtca	73	69.145	ENSOPRG00000012092	RTCA	71	69.145	Ochotona_princeps
ENSIPUG00000024803	rtca	95	72.126	ENSODEG00000006990	RTCA	96	72.365	Octodon_degus
ENSIPUG00000024803	rtca	100	79.121	ENSONIG00000007753	rtca	99	79.121	Oreochromis_niloticus
ENSIPUG00000024803	rtca	87	72.555	ENSOANG00000012055	RTCA	98	72.555	Ornithorhynchus_anatinus
ENSIPUG00000024803	rtca	100	72.678	ENSOCUG00000014247	RTCA	100	72.678	Oryctolagus_cuniculus
ENSIPUG00000024803	rtca	100	78.846	ENSORLG00000013605	rtca	98	81.437	Oryzias_latipes
ENSIPUG00000024803	rtca	100	79.121	ENSORLG00020001904	rtca	100	79.121	Oryzias_latipes_hni
ENSIPUG00000024803	rtca	100	79.121	ENSORLG00015021064	rtca	100	79.121	Oryzias_latipes_hsok
ENSIPUG00000024803	rtca	100	78.022	ENSOMEG00000000756	rtca	100	78.022	Oryzias_melastigma
ENSIPUG00000024803	rtca	100	66.393	ENSOGAG00000005627	RTCA	100	66.393	Otolemur_garnettii
ENSIPUG00000024803	rtca	87	74.214	ENSOARG00000018122	RTCA	100	74.214	Ovis_aries
ENSIPUG00000024803	rtca	100	70.449	ENSPPAG00000035119	RTCA	100	72.492	Pan_paniscus
ENSIPUG00000024803	rtca	100	73.770	ENSPPRG00000000350	RTCA	100	73.770	Panthera_pardus
ENSIPUG00000024803	rtca	100	73.224	ENSPTIG00000012816	RTCA	100	73.224	Panthera_tigris_altaica
ENSIPUG00000024803	rtca	100	70.449	ENSPTRG00000001004	RTCA	100	72.492	Pan_troglodytes
ENSIPUG00000024803	rtca	100	72.951	ENSPANG00000000346	RTCA	100	72.951	Papio_anubis
ENSIPUG00000024803	rtca	100	85.165	ENSPKIG00000001653	rtca	100	85.165	Paramormyrops_kingsleyae
ENSIPUG00000024803	rtca	100	69.589	ENSPSIG00000011408	RTCA	100	69.589	Pelodiscus_sinensis
ENSIPUG00000024803	rtca	100	71.038	ENSPEMG00000018582	Rtca	100	71.038	Peromyscus_maniculatus_bairdii
ENSIPUG00000024803	rtca	99	56.233	ENSPMAG00000009110	rtca	98	56.233	Petromyzon_marinus
ENSIPUG00000024803	rtca	100	72.951	ENSPCIG00000007684	RTCA	100	72.951	Phascolarctos_cinereus
ENSIPUG00000024803	rtca	100	77.534	ENSPFOG00000004824	rtca	100	77.534	Poecilia_formosa
ENSIPUG00000024803	rtca	100	77.473	ENSPLAG00000011753	rtca	99	77.473	Poecilia_latipinna
ENSIPUG00000024803	rtca	100	77.473	ENSPMEG00000020469	rtca	99	77.473	Poecilia_mexicana
ENSIPUG00000024803	rtca	100	76.923	ENSPREG00000001365	rtca	99	76.923	Poecilia_reticulata
ENSIPUG00000024803	rtca	100	72.951	ENSPPYG00000001115	RTCA	100	72.951	Pongo_abelii
ENSIPUG00000024803	rtca	100	70.492	ENSPCAG00000005076	RTCA	100	70.492	Procavia_capensis
ENSIPUG00000024803	rtca	100	73.770	ENSPCOG00000005603	RTCA	100	73.770	Propithecus_coquereli
ENSIPUG00000024803	rtca	100	68.865	ENSPVAG00000009478	RTCA	100	68.865	Pteropus_vampyrus
ENSIPUG00000024803	rtca	100	79.670	ENSPNYG00000004722	rtca	99	79.670	Pundamilia_nyererei
ENSIPUG00000024803	rtca	100	92.582	ENSPNAG00000022270	rtca	100	92.582	Pygocentrus_nattereri
ENSIPUG00000024803	rtca	100	70.765	ENSRNOG00000014575	Rtca	100	70.765	Rattus_norvegicus
ENSIPUG00000024803	rtca	100	70.449	ENSRBIG00000041180	RTCA	100	72.492	Rhinopithecus_bieti
ENSIPUG00000024803	rtca	100	72.951	ENSRROG00000024929	RTCA	100	72.951	Rhinopithecus_roxellana
ENSIPUG00000024803	rtca	100	72.404	ENSSBOG00000028626	RTCA	100	72.404	Saimiri_boliviensis_boliviensis
ENSIPUG00000024803	rtca	100	72.951	ENSSHAG00000001758	RTCA	100	72.951	Sarcophilus_harrisii
ENSIPUG00000024803	rtca	99	78.056	ENSSMAG00000014680	rtca	97	78.056	Scophthalmus_maximus
ENSIPUG00000024803	rtca	98	79.888	ENSSDUG00000015585	rtca	98	79.558	Seriola_dumerili
ENSIPUG00000024803	rtca	96	80.229	ENSSLDG00000018985	rtca	95	80.229	Seriola_lalandi_dorsalis
ENSIPUG00000024803	rtca	87	68.139	ENSSARG00000013993	RTCA	100	68.139	Sorex_araneus
ENSIPUG00000024803	rtca	100	78.297	ENSSPAG00000011938	rtca	99	78.297	Stegastes_partitus
ENSIPUG00000024803	rtca	100	72.951	ENSSSCG00000006865	RTCA	100	72.951	Sus_scrofa
ENSIPUG00000024803	rtca	100	70.411	ENSTGUG00000005154	RTCA	100	70.411	Taeniopygia_guttata
ENSIPUG00000024803	rtca	100	79.396	ENSTRUG00000008799	rtca	100	79.396	Takifugu_rubripes
ENSIPUG00000024803	rtca	100	78.297	ENSTNIG00000004725	rtca	100	78.297	Tetraodon_nigroviridis
ENSIPUG00000024803	rtca	58	60.952	ENSTBEG00000000943	RTCA	59	60.952	Tupaia_belangeri
ENSIPUG00000024803	rtca	100	70.449	ENSTTRG00000015327	RTCA	100	70.449	Tursiops_truncatus
ENSIPUG00000024803	rtca	95	72.414	ENSUAMG00000017265	RTCA	98	72.414	Ursus_americanus
ENSIPUG00000024803	rtca	100	72.678	ENSUMAG00000007881	RTCA	100	72.678	Ursus_maritimus
ENSIPUG00000024803	rtca	87	64.984	ENSVPAG00000001039	RTCA	84	64.984	Vicugna_pacos
ENSIPUG00000024803	rtca	100	73.224	ENSVVUG00000022041	RTCA	68	73.224	Vulpes_vulpes
ENSIPUG00000024803	rtca	98	58.953	ENSXETG00000031661	RTCA	98	58.953	Xenopus_tropicalis
ENSIPUG00000024803	rtca	100	66.209	ENSXCOG00000008002	rtca	100	66.209	Xiphophorus_couchianus
ENSIPUG00000024803	rtca	100	77.747	ENSXMAG00000005482	rtca	99	77.747	Xiphophorus_maculatus